Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm23112-201ENSMUST00000158606 125 ntBASIC4.08□□□□□ -1.76
Prpf40aQ9R1C7 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Prpf40aQ9R1C7 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC4.08□□□□□ -1.76
Prpf40aQ9R1C7 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC4.08□□□□□ -1.76
Prpf40aQ9R1C7 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC4.08□□□□□ -1.76
Prpf40aQ9R1C7 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC4.08□□□□□ -1.76
Prpf40aQ9R1C7 Gm25204-201ENSMUST00000082843 106 ntBASIC4.08□□□□□ -1.76
Prpf40aQ9R1C7 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Prpf40aQ9R1C7 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
Prpf40aQ9R1C7 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Prpf40aQ9R1C7 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Prpf40aQ9R1C7 Gm25169-201ENSMUST00000104190 129 ntBASIC4.07□□□□□ -1.76
Prpf40aQ9R1C7 Gm24482-201ENSMUST00000117005 93 ntBASIC4.07□□□□□ -1.76
Prpf40aQ9R1C7 Gm26020-201ENSMUST00000122729 183 ntBASIC4.07□□□□□ -1.76
Prpf40aQ9R1C7 Gm22553-201ENSMUST00000157797 295 ntBASIC4.07□□□□□ -1.76
Prpf40aQ9R1C7 Gm17161-201ENSMUST00000169187 524 ntBASIC4.07□□□□□ -1.76
Prpf40aQ9R1C7 Gm25457-201ENSMUST00000179509 107 ntBASIC4.07□□□□□ -1.76
Prpf40aQ9R1C7 Gm29408-201ENSMUST00000187536 216 ntBASIC4.07□□□□□ -1.76
Prpf40aQ9R1C7 Gm28992-201ENSMUST00000190534 139 ntBASIC4.07□□□□□ -1.76
Prpf40aQ9R1C7 Gm37343-201ENSMUST00000192542 111 ntBASIC4.07□□□□□ -1.76
Prpf40aQ9R1C7 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC4.07□□□□□ -1.76
Prpf40aQ9R1C7 AC164086.1-201ENSMUST00000221038 289 ntBASIC4.07□□□□□ -1.76
Prpf40aQ9R1C7 AC125379.1-201ENSMUST00000221928 111 ntBASIC4.07□□□□□ -1.76
Prpf40aQ9R1C7 Gm25581-201ENSMUST00000083410 164 ntBASIC4.07□□□□□ -1.76
Prpf40aQ9R1C7 Mir26a-1-201ENSMUST00000083579 90 ntBASIC4.07□□□□□ -1.76
Prpf40aQ9R1C7 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Prpf40aQ9R1C7 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Prpf40aQ9R1C7 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Prpf40aQ9R1C7 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC4.06□□□□□ -1.76
Prpf40aQ9R1C7 Gm43875-201ENSMUST00000203319 2475 ntBASIC4.06□□□□□ -1.76
Prpf40aQ9R1C7 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Prpf40aQ9R1C7 Gm43300-201ENSMUST00000198540 2043 ntBASIC4.06□□□□□ -1.76
Prpf40aQ9R1C7 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Prpf40aQ9R1C7 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC4.06□□□□□ -1.76
Prpf40aQ9R1C7 Gm22281-201ENSMUST00000157198 103 ntBASIC4.06□□□□□ -1.76
Prpf40aQ9R1C7 Gm24745-201ENSMUST00000157840 85 ntBASIC4.06□□□□□ -1.76
Prpf40aQ9R1C7 Gm25224-201ENSMUST00000158195 68 ntBASIC4.06□□□□□ -1.76
Prpf40aQ9R1C7 Mir1936-201ENSMUST00000158699 93 ntBASIC4.06□□□□□ -1.76
Prpf40aQ9R1C7 Gm20693-201ENSMUST00000177431 211 ntBASIC4.06□□□□□ -1.76
Prpf40aQ9R1C7 Mir713-201ENSMUST00000178651 108 ntBASIC4.06□□□□□ -1.76
Prpf40aQ9R1C7 Gm27760-201ENSMUST00000185048 114 ntBASIC4.06□□□□□ -1.76
Prpf40aQ9R1C7 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC4.06□□□□□ -1.76
Prpf40aQ9R1C7 AC140344.1-201ENSMUST00000223384 387 ntBASIC4.06□□□□□ -1.76
Prpf40aQ9R1C7 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Prpf40aQ9R1C7 CT010444.1-201ENSMUST00000219963 3845 ntBASIC4.06□□□□□ -1.76
Prpf40aQ9R1C7 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Prpf40aQ9R1C7 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Prpf40aQ9R1C7 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
Prpf40aQ9R1C7 Gm43889-201ENSMUST00000203950 3681 ntBASIC4.05□□□□□ -1.76
Prpf40aQ9R1C7 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Prpf40aQ9R1C7 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Prpf40aQ9R1C7 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Prpf40aQ9R1C7 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
Prpf40aQ9R1C7 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Prpf40aQ9R1C7 Gm22483-201ENSMUST00000157986 274 ntBASIC4.05□□□□□ -1.76
Prpf40aQ9R1C7 Gm26403-201ENSMUST00000158500 105 ntBASIC4.05□□□□□ -1.76
Prpf40aQ9R1C7 Gm22367-201ENSMUST00000178930 132 ntBASIC4.05□□□□□ -1.76
Prpf40aQ9R1C7 Mir21b-201ENSMUST00000184317 108 ntBASIC4.05□□□□□ -1.76
Prpf40aQ9R1C7 Gm28155-201ENSMUST00000191066 151 ntBASIC4.05□□□□□ -1.76
Prpf40aQ9R1C7 Gm5829-201ENSMUST00000191383 351 ntBASIC4.05□□□□□ -1.76
Prpf40aQ9R1C7 Gm37001-201ENSMUST00000193377 190 ntBASIC4.05□□□□□ -1.76
Prpf40aQ9R1C7 AC153361.1-201ENSMUST00000219679 247 ntBASIC4.05□□□□□ -1.76
Prpf40aQ9R1C7 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Prpf40aQ9R1C7 Gm22304-201ENSMUST00000082688 129 ntBASIC4.05□□□□□ -1.76
Prpf40aQ9R1C7 Gm44842-201ENSMUST00000209173 3372 ntBASIC4.05□□□□□ -1.76
Prpf40aQ9R1C7 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Prpf40aQ9R1C7 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Prpf40aQ9R1C7 Gm42768-201ENSMUST00000197734 2897 ntBASIC4.04□□□□□ -1.76
Prpf40aQ9R1C7 AC117199.1-201ENSMUST00000219940 3132 ntBASIC4.04□□□□□ -1.76
Prpf40aQ9R1C7 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Prpf40aQ9R1C7 Gm26418-201ENSMUST00000104275 137 ntBASIC4.04□□□□□ -1.76
Prpf40aQ9R1C7 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Prpf40aQ9R1C7 Gm15365-201ENSMUST00000122392 300 ntBASIC4.04□□□□□ -1.76
Prpf40aQ9R1C7 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC4.04□□□□□ -1.76
Prpf40aQ9R1C7 Gm23535-201ENSMUST00000157542 106 ntBASIC4.04□□□□□ -1.76
Prpf40aQ9R1C7 Gm22139-201ENSMUST00000158747 105 ntBASIC4.04□□□□□ -1.76
Prpf40aQ9R1C7 Mir5710-201ENSMUST00000176884 69 ntBASIC4.04□□□□□ -1.76
Prpf40aQ9R1C7 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC4.04□□□□□ -1.76
Prpf40aQ9R1C7 Gm29603-201ENSMUST00000186792 334 ntBASIC4.04□□□□□ -1.76
Prpf40aQ9R1C7 Gm24705-201ENSMUST00000082808 107 ntBASIC4.04□□□□□ -1.76
Prpf40aQ9R1C7 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Prpf40aQ9R1C7 Gm37298-201ENSMUST00000193770 3868 ntBASIC4.04□□□□□ -1.76
Prpf40aQ9R1C7 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Prpf40aQ9R1C7 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Prpf40aQ9R1C7 Gm9911-201ENSMUST00000211467 2802 ntBASIC4.03□□□□□ -1.76
Prpf40aQ9R1C7 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Prpf40aQ9R1C7 n-R5s219-201ENSMUST00000104328 132 ntBASIC4.03□□□□□ -1.76
Prpf40aQ9R1C7 Snord89-201ENSMUST00000104516 110 ntBASIC4.03□□□□□ -1.76
Prpf40aQ9R1C7 Gm22557-201ENSMUST00000157804 102 ntBASIC4.03□□□□□ -1.76
Prpf40aQ9R1C7 Gm22382-201ENSMUST00000158185 130 ntBASIC4.03□□□□□ -1.76
Prpf40aQ9R1C7 Gm22840-201ENSMUST00000158444 136 ntBASIC4.03□□□□□ -1.76
Prpf40aQ9R1C7 Gm24739-201ENSMUST00000158855 292 ntBASIC4.03□□□□□ -1.76
Prpf40aQ9R1C7 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC4.03□□□□□ -1.76
Prpf40aQ9R1C7 Gm5010-201ENSMUST00000213131 260 ntBASIC4.03□□□□□ -1.76
Prpf40aQ9R1C7 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Prpf40aQ9R1C7 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Prpf40aQ9R1C7 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Prpf40aQ9R1C7 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Prpf40aQ9R1C7 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Prpf40aQ9R1C7 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms