Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm7871-201ENSMUST00000195346 618 ntBASIC-0.01□□□□□ -2.41
Scn11aQ9R053 Gm45704-201ENSMUST00000212582 403 ntBASIC-0.01□□□□□ -2.41
Scn11aQ9R053 AC124196.2-201ENSMUST00000224835 145 ntBASIC-0.01□□□□□ -2.41
Scn11aQ9R053 Gm24456-201ENSMUST00000083198 107 ntBASIC-0.01□□□□□ -2.41
Scn11aQ9R053 Gm22368-201ENSMUST00000102416 109 ntBASIC-0.02□□□□□ -2.41
Scn11aQ9R053 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
Scn11aQ9R053 n-R5s187-201ENSMUST00000122769 111 ntBASIC-0.02□□□□□ -2.41
Scn11aQ9R053 Mir3108-201ENSMUST00000175500 79 ntBASIC-0.02□□□□□ -2.41
Scn11aQ9R053 Gm21809-201ENSMUST00000178495 468 ntBASIC-0.02□□□□□ -2.41
Scn11aQ9R053 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC-0.02□□□□□ -2.41
Scn11aQ9R053 Gm27588-201ENSMUST00000185096 263 ntBASIC-0.02□□□□□ -2.41
Scn11aQ9R053 Gm43035-201ENSMUST00000197626 517 ntBASIC-0.02□□□□□ -2.41
Scn11aQ9R053 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC-0.02□□□□□ -2.41
Scn11aQ9R053 Gm44041-201ENSMUST00000203678 396 ntBASIC-0.02□□□□□ -2.41
Scn11aQ9R053 AL929285.1-201ENSMUST00000215522 229 ntBASIC-0.02□□□□□ -2.41
Scn11aQ9R053 Mir6388-201ENSMUST00000184417 75 ntBASIC-0.03□□□□□ -2.41
Scn11aQ9R053 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC-0.03□□□□□ -2.41
Scn11aQ9R053 Gm7654-201ENSMUST00000186738 683 ntBASIC-0.03□□□□□ -2.41
Scn11aQ9R053 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC-0.03□□□□□ -2.41
Scn11aQ9R053 Gm5116-201ENSMUST00000187732 463 ntBASIC-0.03□□□□□ -2.41
Scn11aQ9R053 Gm6003-201ENSMUST00000187903 463 ntBASIC-0.03□□□□□ -2.41
Scn11aQ9R053 Gm29627-201ENSMUST00000187984 463 ntBASIC-0.03□□□□□ -2.41
Scn11aQ9R053 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC-0.03□□□□□ -2.41
Scn11aQ9R053 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC-0.03□□□□□ -2.41
Scn11aQ9R053 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC-0.03□□□□□ -2.41
Scn11aQ9R053 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC-0.03□□□□□ -2.41
Scn11aQ9R053 CT009733.1-203ENSMUST00000224033 451 ntBASIC-0.03□□□□□ -2.41
Scn11aQ9R053 CT009733.1-201ENSMUST00000225322 425 ntBASIC-0.03□□□□□ -2.41
Scn11aQ9R053 Gm12449-201ENSMUST00000117572 234 ntBASIC-0.04□□□□□ -2.42
Scn11aQ9R053 Gm14129-201ENSMUST00000122436 291 ntBASIC-0.04□□□□□ -2.42
Scn11aQ9R053 Gm29613-201ENSMUST00000185846 313 ntBASIC-0.04□□□□□ -2.42
Scn11aQ9R053 Gm29544-201ENSMUST00000188860 313 ntBASIC-0.04□□□□□ -2.42
Scn11aQ9R053 Gm28808-201ENSMUST00000190978 313 ntBASIC-0.04□□□□□ -2.42
Scn11aQ9R053 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC-0.04□□□□□ -2.42
Scn11aQ9R053 AC124772.1-201ENSMUST00000221325 151 ntBASIC-0.04□□□□□ -2.42
Scn11aQ9R053 CT485612.2-201ENSMUST00000223014 151 ntBASIC-0.04□□□□□ -2.42
Scn11aQ9R053 Mir672-201ENSMUST00000102331 100 ntBASIC-0.04□□□□□ -2.42
Scn11aQ9R053 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
Scn11aQ9R053 Snrpert-201ENSMUST00000121967 279 ntBASIC-0.04□□□□□ -2.42
Scn11aQ9R053 n-R5s70-201ENSMUST00000122650 116 ntBASIC-0.04□□□□□ -2.42
Scn11aQ9R053 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC-0.04□□□□□ -2.42
Scn11aQ9R053 Gm25243-201ENSMUST00000174912 207 ntBASIC-0.04□□□□□ -2.42
Scn11aQ9R053 Gm25952-201ENSMUST00000175329 74 ntBASIC-0.04□□□□□ -2.42
Scn11aQ9R053 Gm27475-201ENSMUST00000183420 61 ntBASIC-0.04□□□□□ -2.42
Scn11aQ9R053 Mir7065-201ENSMUST00000185110 61 ntBASIC-0.04□□□□□ -2.42
Scn11aQ9R053 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.04□□□□□ -2.42
Scn11aQ9R053 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC-0.04□□□□□ -2.42
Scn11aQ9R053 Gm45878-201ENSMUST00000211839 241 ntBASIC-0.04□□□□□ -2.42
Scn11aQ9R053 AC164161.1-201ENSMUST00000214076 639 ntBASIC-0.04□□□□□ -2.42
Scn11aQ9R053 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC-0.04□□□□□ -2.42
Scn11aQ9R053 Gm42719-201ENSMUST00000197393 355 ntBASIC-0.05□□□□□ -2.42
Scn11aQ9R053 Gm44524-201ENSMUST00000203899 271 ntBASIC-0.05□□□□□ -2.42
Scn11aQ9R053 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.06□□□□□ -2.42
Scn11aQ9R053 Gm22960-201ENSMUST00000122517 104 ntBASIC-0.06□□□□□ -2.42
Scn11aQ9R053 n-R5s216-201ENSMUST00000122755 112 ntBASIC-0.06□□□□□ -2.42
Scn11aQ9R053 Mir344d-3-201ENSMUST00000175458 80 ntBASIC-0.06□□□□□ -2.42
Scn11aQ9R053 AC126691.1-201ENSMUST00000226534 202 ntBASIC-0.06□□□□□ -2.42
Scn11aQ9R053 Gm9795-201ENSMUST00000062156 693 ntBASIC-0.06□□□□□ -2.42
Scn11aQ9R053 Gm24372-201ENSMUST00000104400 110 ntBASIC-0.06□□□□□ -2.42
Scn11aQ9R053 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC-0.06□□□□□ -2.42
Scn11aQ9R053 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC-0.06□□□□□ -2.42
Scn11aQ9R053 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC-0.06□□□□□ -2.42
Scn11aQ9R053 Gm18160-201ENSMUST00000214279 827 ntBASIC-0.06□□□□□ -2.42
Scn11aQ9R053 AC114010.1-201ENSMUST00000222060 379 ntBASIC-0.06□□□□□ -2.42
Scn11aQ9R053 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
Scn11aQ9R053 Mir670-201ENSMUST00000102380 100 ntBASIC-0.07□□□□□ -2.42
Scn11aQ9R053 Gm24582-201ENSMUST00000103967 103 ntBASIC-0.07□□□□□ -2.42
Scn11aQ9R053 n-R5s202-201ENSMUST00000104517 114 ntBASIC-0.07□□□□□ -2.42
Scn11aQ9R053 Gm24678-201ENSMUST00000158756 104 ntBASIC-0.07□□□□□ -2.42
Scn11aQ9R053 Gm18588-201ENSMUST00000177308 492 ntBASIC-0.07□□□□□ -2.42
Scn11aQ9R053 Mir6372-201ENSMUST00000185114 109 ntBASIC-0.07□□□□□ -2.42
Scn11aQ9R053 Gm28995-201ENSMUST00000186625 261 ntBASIC-0.07□□□□□ -2.42
Scn11aQ9R053 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC-0.07□□□□□ -2.42
Scn11aQ9R053 Gm37002-201ENSMUST00000194560 373 ntBASIC-0.07□□□□□ -2.42
Scn11aQ9R053 Gm43124-201ENSMUST00000201878 278 ntBASIC-0.07□□□□□ -2.42
Scn11aQ9R053 Gm19709-201ENSMUST00000215403 482 ntBASIC-0.07□□□□□ -2.42
Scn11aQ9R053 AC170810.3-201ENSMUST00000226177 374 ntBASIC-0.07□□□□□ -2.42
Scn11aQ9R053 AC166344.2-201ENSMUST00000226747 374 ntBASIC-0.07□□□□□ -2.42
Scn11aQ9R053 Gm24091-201ENSMUST00000082550 83 ntBASIC-0.07□□□□□ -2.42
Scn11aQ9R053 Gm23711-201ENSMUST00000083856 83 ntBASIC-0.07□□□□□ -2.42
Scn11aQ9R053 Gm15223-201ENSMUST00000120989 826 ntBASIC-0.08□□□□□ -2.42
Scn11aQ9R053 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC-0.08□□□□□ -2.42
Scn11aQ9R053 Gm45101-201ENSMUST00000208327 232 ntBASIC-0.08□□□□□ -2.42
Scn11aQ9R053 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC-0.08□□□□□ -2.42
Scn11aQ9R053 AC126043.1-201ENSMUST00000221304 1141 ntBASIC-0.08□□□□□ -2.42
Scn11aQ9R053 AC127371.3-201ENSMUST00000228129 415 ntBASIC-0.08□□□□□ -2.42
Scn11aQ9R053 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC-0.08□□□□□ -2.42
Scn11aQ9R053 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
Scn11aQ9R053 Gm24833-201ENSMUST00000116775 120 ntBASIC-0.09□□□□□ -2.42
Scn11aQ9R053 Gm24851-201ENSMUST00000158028 103 ntBASIC-0.09□□□□□ -2.42
Scn11aQ9R053 Gm26355-201ENSMUST00000158220 105 ntBASIC-0.09□□□□□ -2.42
Scn11aQ9R053 Gm25525-201ENSMUST00000177701 107 ntBASIC-0.09□□□□□ -2.42
Scn11aQ9R053 Gm25672-201ENSMUST00000180111 107 ntBASIC-0.09□□□□□ -2.42
Scn11aQ9R053 Gm27313-201ENSMUST00000183500 142 ntBASIC-0.09□□□□□ -2.42
Scn11aQ9R053 Mir7667-201ENSMUST00000183866 63 ntBASIC-0.09□□□□□ -2.42
Scn11aQ9R053 Gm29037-201ENSMUST00000189092 313 ntBASIC-0.09□□□□□ -2.42
Scn11aQ9R053 Gm37586-201ENSMUST00000193654 204 ntBASIC-0.09□□□□□ -2.42
Scn11aQ9R053 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC-0.09□□□□□ -2.42
Scn11aQ9R053 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC-0.09□□□□□ -2.42
Scn11aQ9R053 Gm22971-201ENSMUST00000083305 97 ntBASIC-0.09□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 152.2 ms