Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Gm26102-201ENSMUST00000157251 284 ntBASIC0.22□□□□□ -2.37
Six6Q9QZ28 Gm26484-201ENSMUST00000158018 106 ntBASIC0.22□□□□□ -2.37
Six6Q9QZ28 Gm25371-201ENSMUST00000158162 101 ntBASIC0.22□□□□□ -2.37
Six6Q9QZ28 Gm23114-201ENSMUST00000158478 117 ntBASIC0.22□□□□□ -2.37
Six6Q9QZ28 Gm26405-201ENSMUST00000158495 100 ntBASIC0.22□□□□□ -2.37
Six6Q9QZ28 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC0.22□□□□□ -2.37
Six6Q9QZ28 Mir3061-201ENSMUST00000175129 91 ntBASIC0.22□□□□□ -2.37
Six6Q9QZ28 Mir3473c-201ENSMUST00000175262 81 ntBASIC0.22□□□□□ -2.37
Six6Q9QZ28 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC0.22□□□□□ -2.37
Six6Q9QZ28 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC0.22□□□□□ -2.37
Six6Q9QZ28 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
Six6Q9QZ28 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC0.22□□□□□ -2.37
Six6Q9QZ28 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC0.22□□□□□ -2.37
Six6Q9QZ28 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC0.22□□□□□ -2.37
Six6Q9QZ28 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC0.22□□□□□ -2.37
Six6Q9QZ28 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC0.22□□□□□ -2.37
Six6Q9QZ28 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC0.22□□□□□ -2.37
Six6Q9QZ28 Gm24969-201ENSMUST00000180331 79 ntBASIC0.22□□□□□ -2.37
Six6Q9QZ28 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC0.22□□□□□ -2.37
Six6Q9QZ28 Mir7050-201ENSMUST00000184636 60 ntBASIC0.22□□□□□ -2.37
Six6Q9QZ28 AL928567.1-201ENSMUST00000197891 138 ntBASIC0.22□□□□□ -2.37
Six6Q9QZ28 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC0.22□□□□□ -2.37
Six6Q9QZ28 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
Six6Q9QZ28 AC159203.2-201ENSMUST00000221326 193 ntBASIC0.22□□□□□ -2.37
Six6Q9QZ28 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
Six6Q9QZ28 DQ267101-201ENSMUST00000082562 73 ntBASIC0.22□□□□□ -2.37
Six6Q9QZ28 Snord118-201ENSMUST00000082965 135 ntBASIC0.22□□□□□ -2.37
Six6Q9QZ28 Gm23452-201ENSMUST00000083327 107 ntBASIC0.22□□□□□ -2.37
Six6Q9QZ28 Gm5670-201ENSMUST00000093546 372 ntBASIC0.22□□□□□ -2.37
Six6Q9QZ28 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.22□□□□□ -2.37
Six6Q9QZ28 Mup-ps14-201ENSMUST00000118437 532 ntBASIC0.21□□□□□ -2.38
Six6Q9QZ28 Gm14793-201ENSMUST00000118739 311 ntBASIC0.21□□□□□ -2.38
Six6Q9QZ28 Gm16412-201ENSMUST00000121602 273 ntBASIC0.21□□□□□ -2.38
Six6Q9QZ28 Mup-ps2-201ENSMUST00000142602 533 ntBASIC0.21□□□□□ -2.38
Six6Q9QZ28 Gm23106-201ENSMUST00000157554 101 ntBASIC0.21□□□□□ -2.38
Six6Q9QZ28 Mir3968-201ENSMUST00000175355 100 ntBASIC0.21□□□□□ -2.38
Six6Q9QZ28 Mir1954-201ENSMUST00000175595 86 ntBASIC0.21□□□□□ -2.38
Six6Q9QZ28 Gm26116-201ENSMUST00000175600 77 ntBASIC0.21□□□□□ -2.38
Six6Q9QZ28 Gm27894-201ENSMUST00000184177 92 ntBASIC0.21□□□□□ -2.38
Six6Q9QZ28 Gm28435-201ENSMUST00000185496 108 ntBASIC0.21□□□□□ -2.38
Six6Q9QZ28 Gm44976-201ENSMUST00000205543 261 ntBASIC0.21□□□□□ -2.38
Six6Q9QZ28 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC0.21□□□□□ -2.38
Six6Q9QZ28 Gm2829-201ENSMUST00000213121 499 ntBASIC0.21□□□□□ -2.38
Six6Q9QZ28 Gm18703-201ENSMUST00000215318 333 ntBASIC0.21□□□□□ -2.38
Six6Q9QZ28 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.21□□□□□ -2.38
Six6Q9QZ28 AC127371.3-201ENSMUST00000228129 415 ntBASIC0.21□□□□□ -2.38
Six6Q9QZ28 Gm25357-201ENSMUST00000082745 72 ntBASIC0.21□□□□□ -2.38
Six6Q9QZ28 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC0.2□□□□□ -2.38
Six6Q9QZ28 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC0.2□□□□□ -2.38
Six6Q9QZ28 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
Six6Q9QZ28 Gm22796-201ENSMUST00000157234 106 ntBASIC0.2□□□□□ -2.38
Six6Q9QZ28 Gm22228-201ENSMUST00000157364 101 ntBASIC0.2□□□□□ -2.38
Six6Q9QZ28 Gm23196-201ENSMUST00000158806 107 ntBASIC0.2□□□□□ -2.38
Six6Q9QZ28 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC0.2□□□□□ -2.38
Six6Q9QZ28 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
Six6Q9QZ28 Gm43035-201ENSMUST00000197626 517 ntBASIC0.2□□□□□ -2.38
Six6Q9QZ28 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC0.2□□□□□ -2.38
Six6Q9QZ28 AC156795.1-201ENSMUST00000214655 414 ntBASIC0.2□□□□□ -2.38
Six6Q9QZ28 Gm24311-201ENSMUST00000082570 104 ntBASIC0.2□□□□□ -2.38
Six6Q9QZ28 Gm24624-201ENSMUST00000082617 164 ntBASIC0.2□□□□□ -2.38
Six6Q9QZ28 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.19□□□□□ -2.38
Six6Q9QZ28 AC125532.1-201ENSMUST00000216210 2334 ntBASIC0.19□□□□□ -2.38
Six6Q9QZ28 Gm11862-201ENSMUST00000119678 659 ntBASIC0.19□□□□□ -2.38
Six6Q9QZ28 Gm26150-201ENSMUST00000157426 151 ntBASIC0.19□□□□□ -2.38
Six6Q9QZ28 Rnu7-201ENSMUST00000158458 62 ntBASIC0.19□□□□□ -2.38
Six6Q9QZ28 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC0.19□□□□□ -2.38
Six6Q9QZ28 Mir7052-201ENSMUST00000184821 65 ntBASIC0.19□□□□□ -2.38
Six6Q9QZ28 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC0.19□□□□□ -2.38
Six6Q9QZ28 Gm38149-201ENSMUST00000191943 339 ntBASIC0.19□□□□□ -2.38
Six6Q9QZ28 Gm37319-201ENSMUST00000193500 636 ntBASIC0.19□□□□□ -2.38
Six6Q9QZ28 Gm43680-201ENSMUST00000199466 340 ntBASIC0.19□□□□□ -2.38
Six6Q9QZ28 Gm44828-201ENSMUST00000203745 106 ntBASIC0.19□□□□□ -2.38
Six6Q9QZ28 AC140477.1-201ENSMUST00000222354 246 ntBASIC0.19□□□□□ -2.38
Six6Q9QZ28 Gm24536-201ENSMUST00000083144 107 ntBASIC0.19□□□□□ -2.38
Six6Q9QZ28 Gm25138-201ENSMUST00000083248 136 ntBASIC0.19□□□□□ -2.38
Six6Q9QZ28 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.18□□□□□ -2.38
Six6Q9QZ28 Gm25377-201ENSMUST00000104334 129 ntBASIC0.18□□□□□ -2.38
Six6Q9QZ28 Gm11575-201ENSMUST00000122243 228 ntBASIC0.18□□□□□ -2.38
Six6Q9QZ28 Gm25059-201ENSMUST00000157367 117 ntBASIC0.18□□□□□ -2.38
Six6Q9QZ28 Gm23390-201ENSMUST00000157393 106 ntBASIC0.18□□□□□ -2.38
Six6Q9QZ28 Gm23586-201ENSMUST00000157657 123 ntBASIC0.18□□□□□ -2.38
Six6Q9QZ28 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC0.18□□□□□ -2.38
Six6Q9QZ28 Gm22392-201ENSMUST00000177971 107 ntBASIC0.18□□□□□ -2.38
Six6Q9QZ28 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC0.18□□□□□ -2.38
Six6Q9QZ28 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC0.18□□□□□ -2.38
Six6Q9QZ28 Gm27717-201ENSMUST00000183933 151 ntBASIC0.18□□□□□ -2.38
Six6Q9QZ28 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC0.18□□□□□ -2.38
Six6Q9QZ28 Gm37869-201ENSMUST00000193385 595 ntBASIC0.18□□□□□ -2.38
Six6Q9QZ28 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC0.18□□□□□ -2.38
Six6Q9QZ28 Gm17990-201ENSMUST00000211728 553 ntBASIC0.18□□□□□ -2.38
Six6Q9QZ28 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.18□□□□□ -2.38
Six6Q9QZ28 AC167977.2-201ENSMUST00000225676 682 ntBASIC0.18□□□□□ -2.38
Six6Q9QZ28 AC168062.3-201ENSMUST00000227025 165 ntBASIC0.18□□□□□ -2.38
Six6Q9QZ28 Gm22620-201ENSMUST00000082700 133 ntBASIC0.18□□□□□ -2.38
Six6Q9QZ28 Gm23645-201ENSMUST00000083228 108 ntBASIC0.18□□□□□ -2.38
Six6Q9QZ28 Gm24258-201ENSMUST00000083739 133 ntBASIC0.18□□□□□ -2.38
Six6Q9QZ28 Gm25378-201ENSMUST00000104333 129 ntBASIC0.17□□□□□ -2.38
Six6Q9QZ28 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
Six6Q9QZ28 Gm13396-201ENSMUST00000120617 271 ntBASIC0.17□□□□□ -2.38
Six6Q9QZ28 Gm25901-201ENSMUST00000158494 130 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 99.2 ms