Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.32□□□□□ -2.04
Cpsf3Q9QXK7 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC2.32□□□□□ -2.04
Cpsf3Q9QXK7 Gm28090-201ENSMUST00000189458 664 ntBASIC2.32□□□□□ -2.04
Cpsf3Q9QXK7 Gm37399-201ENSMUST00000195224 416 ntBASIC2.32□□□□□ -2.04
Cpsf3Q9QXK7 Gm44024-201ENSMUST00000203008 476 ntBASIC2.32□□□□□ -2.04
Cpsf3Q9QXK7 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.32□□□□□ -2.04
Cpsf3Q9QXK7 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC2.32□□□□□ -2.04
Cpsf3Q9QXK7 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.32□□□□□ -2.04
Cpsf3Q9QXK7 Gm22997-201ENSMUST00000082845 107 ntBASIC2.32□□□□□ -2.04
Cpsf3Q9QXK7 Gm26164-201ENSMUST00000083793 104 ntBASIC2.32□□□□□ -2.04
Cpsf3Q9QXK7 Gm22365-201ENSMUST00000093750 117 ntBASIC2.32□□□□□ -2.04
Cpsf3Q9QXK7 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Cpsf3Q9QXK7 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.31□□□□□ -2.04
Cpsf3Q9QXK7 Gm16510-201ENSMUST00000153501 249 ntBASIC2.31□□□□□ -2.04
Cpsf3Q9QXK7 Gm25827-201ENSMUST00000157089 107 ntBASIC2.31□□□□□ -2.04
Cpsf3Q9QXK7 Gm23324-201ENSMUST00000157421 131 ntBASIC2.31□□□□□ -2.04
Cpsf3Q9QXK7 Gm7953-201ENSMUST00000168278 469 ntBASIC2.31□□□□□ -2.04
Cpsf3Q9QXK7 Gm25020-201ENSMUST00000178071 107 ntBASIC2.31□□□□□ -2.04
Cpsf3Q9QXK7 Gm37557-201ENSMUST00000191640 139 ntBASIC2.31□□□□□ -2.04
Cpsf3Q9QXK7 Gm42570-201ENSMUST00000195937 292 ntBASIC2.31□□□□□ -2.04
Cpsf3Q9QXK7 Mir7215-201ENSMUST00000200383 51 ntBASIC2.31□□□□□ -2.04
Cpsf3Q9QXK7 Gm44881-201ENSMUST00000205425 367 ntBASIC2.31□□□□□ -2.04
Cpsf3Q9QXK7 Gm45119-201ENSMUST00000207612 199 ntBASIC2.31□□□□□ -2.04
Cpsf3Q9QXK7 AC130821.1-201ENSMUST00000221997 293 ntBASIC2.31□□□□□ -2.04
Cpsf3Q9QXK7 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Cpsf3Q9QXK7 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Cpsf3Q9QXK7 Gm25135-201ENSMUST00000082648 143 ntBASIC2.31□□□□□ -2.04
Cpsf3Q9QXK7 Gm26066-201ENSMUST00000083385 109 ntBASIC2.31□□□□□ -2.04
Cpsf3Q9QXK7 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Cpsf3Q9QXK7 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Cpsf3Q9QXK7 Gm14670-201ENSMUST00000117327 337 ntBASIC2.3□□□□□ -2.04
Cpsf3Q9QXK7 Gm12941-201ENSMUST00000117934 220 ntBASIC2.3□□□□□ -2.04
Cpsf3Q9QXK7 Gm14748-201ENSMUST00000119819 411 ntBASIC2.3□□□□□ -2.04
Cpsf3Q9QXK7 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.3□□□□□ -2.04
Cpsf3Q9QXK7 Gm27926-201ENSMUST00000157180 66 ntBASIC2.3□□□□□ -2.04
Cpsf3Q9QXK7 Gm23435-201ENSMUST00000157183 156 ntBASIC2.3□□□□□ -2.04
Cpsf3Q9QXK7 Gm24237-201ENSMUST00000157790 132 ntBASIC2.3□□□□□ -2.04
Cpsf3Q9QXK7 Mir1927-201ENSMUST00000158579 109 ntBASIC2.3□□□□□ -2.04
Cpsf3Q9QXK7 Gm37377-201ENSMUST00000191733 304 ntBASIC2.3□□□□□ -2.04
Cpsf3Q9QXK7 Gm43624-201ENSMUST00000197368 180 ntBASIC2.3□□□□□ -2.04
Cpsf3Q9QXK7 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.3□□□□□ -2.04
Cpsf3Q9QXK7 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.3□□□□□ -2.04
Cpsf3Q9QXK7 AC126267.1-201ENSMUST00000214282 284 ntBASIC2.3□□□□□ -2.04
Cpsf3Q9QXK7 Gm40810-201ENSMUST00000219149 253 ntBASIC2.3□□□□□ -2.04
Cpsf3Q9QXK7 Gm33654-201ENSMUST00000221704 215 ntBASIC2.3□□□□□ -2.04
Cpsf3Q9QXK7 Gm21937-201ENSMUST00000222825 218 ntBASIC2.3□□□□□ -2.04
Cpsf3Q9QXK7 Gm6109-201ENSMUST00000223297 348 ntBASIC2.3□□□□□ -2.04
Cpsf3Q9QXK7 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.3□□□□□ -2.04
Cpsf3Q9QXK7 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
Cpsf3Q9QXK7 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Cpsf3Q9QXK7 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Cpsf3Q9QXK7 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.29□□□□□ -2.04
Cpsf3Q9QXK7 Gm38388-201ENSMUST00000195569 1430 ntBASIC2.29□□□□□ -2.04
Cpsf3Q9QXK7 Gm24338-201ENSMUST00000104205 127 ntBASIC2.29□□□□□ -2.04
Cpsf3Q9QXK7 Gm14774-201ENSMUST00000117857 536 ntBASIC2.29□□□□□ -2.04
Cpsf3Q9QXK7 Gm15844-201ENSMUST00000118016 576 ntBASIC2.29□□□□□ -2.04
Cpsf3Q9QXK7 Gm13433-201ENSMUST00000121701 240 ntBASIC2.29□□□□□ -2.04
Cpsf3Q9QXK7 Gm22554-201ENSMUST00000157798 147 ntBASIC2.29□□□□□ -2.04
Cpsf3Q9QXK7 Gm22535-201ENSMUST00000158174 119 ntBASIC2.29□□□□□ -2.04
Cpsf3Q9QXK7 Gm22435-201ENSMUST00000158552 128 ntBASIC2.29□□□□□ -2.04
Cpsf3Q9QXK7 Gm15900-201ENSMUST00000161584 342 ntBASIC2.29□□□□□ -2.04
Cpsf3Q9QXK7 Trav15n-3-201ENSMUST00000200498 168 ntBASIC2.29□□□□□ -2.04
Cpsf3Q9QXK7 Gm43884-201ENSMUST00000204251 559 ntBASIC2.29□□□□□ -2.04
Cpsf3Q9QXK7 Gm46389-201ENSMUST00000223199 392 ntBASIC2.29□□□□□ -2.04
Cpsf3Q9QXK7 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Cpsf3Q9QXK7 Gm23246-201ENSMUST00000083371 67 ntBASIC2.29□□□□□ -2.04
Cpsf3Q9QXK7 Mir93-201ENSMUST00000083593 88 ntBASIC2.29□□□□□ -2.04
Cpsf3Q9QXK7 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.29□□□□□ -2.04
Cpsf3Q9QXK7 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.29□□□□□ -2.04
Cpsf3Q9QXK7 Gm45557-201ENSMUST00000210004 1651 ntBASIC2.28□□□□□ -2.04
Cpsf3Q9QXK7 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
Cpsf3Q9QXK7 Gm14296-202ENSMUST00000108931 750 ntBASIC2.28□□□□□ -2.04
Cpsf3Q9QXK7 Gm3788-201ENSMUST00000119949 136 ntBASIC2.28□□□□□ -2.04
Cpsf3Q9QXK7 Gm15536-201ENSMUST00000121411 114 ntBASIC2.28□□□□□ -2.04
Cpsf3Q9QXK7 Gm25269-201ENSMUST00000122601 104 ntBASIC2.28□□□□□ -2.04
Cpsf3Q9QXK7 Gm22227-201ENSMUST00000157356 259 ntBASIC2.28□□□□□ -2.04
Cpsf3Q9QXK7 Gm22083-201ENSMUST00000157586 102 ntBASIC2.28□□□□□ -2.04
Cpsf3Q9QXK7 Gm24192-201ENSMUST00000157978 145 ntBASIC2.28□□□□□ -2.04
Cpsf3Q9QXK7 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC2.28□□□□□ -2.04
Cpsf3Q9QXK7 Gm25121-201ENSMUST00000179846 79 ntBASIC2.28□□□□□ -2.04
Cpsf3Q9QXK7 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.04
Cpsf3Q9QXK7 Gm44794-201ENSMUST00000206550 411 ntBASIC2.28□□□□□ -2.04
Cpsf3Q9QXK7 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.28□□□□□ -2.04
Cpsf3Q9QXK7 Gm5023-201ENSMUST00000217442 587 ntBASIC2.28□□□□□ -2.04
Cpsf3Q9QXK7 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC2.28□□□□□ -2.04
Cpsf3Q9QXK7 Gm23404-201ENSMUST00000082543 97 ntBASIC2.28□□□□□ -2.04
Cpsf3Q9QXK7 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.05
Cpsf3Q9QXK7 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
Cpsf3Q9QXK7 Gm26154-201ENSMUST00000102339 96 ntBASIC2.27□□□□□ -2.05
Cpsf3Q9QXK7 Mdga2-203ENSMUST00000113942 423 ntBASIC2.27□□□□□ -2.05
Cpsf3Q9QXK7 Gm14574-201ENSMUST00000120644 279 ntBASIC2.27□□□□□ -2.05
Cpsf3Q9QXK7 Gm14775-201ENSMUST00000122089 310 ntBASIC2.27□□□□□ -2.05
Cpsf3Q9QXK7 Gm24892-201ENSMUST00000122747 104 ntBASIC2.27□□□□□ -2.05
Cpsf3Q9QXK7 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Cpsf3Q9QXK7 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
Cpsf3Q9QXK7 Gm43238-201ENSMUST00000196463 359 ntBASIC2.27□□□□□ -2.05
Cpsf3Q9QXK7 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.27□□□□□ -2.05
Cpsf3Q9QXK7 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Cpsf3Q9QXK7 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.27□□□□□ -2.05
Cpsf3Q9QXK7 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2.27□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 138 ms