Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC1.39□□□□□ -2.19
Trem1Q9JKE2 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC1.39□□□□□ -2.19
Trem1Q9JKE2 Gm43245-201ENSMUST00000197603 468 ntBASIC1.39□□□□□ -2.19
Trem1Q9JKE2 Gm43035-201ENSMUST00000197626 517 ntBASIC1.39□□□□□ -2.19
Trem1Q9JKE2 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC1.39□□□□□ -2.19
Trem1Q9JKE2 Gm21937-201ENSMUST00000222825 218 ntBASIC1.39□□□□□ -2.19
Trem1Q9JKE2 AC153646.1-201ENSMUST00000223229 1279 ntBASIC1.39□□□□□ -2.19
Trem1Q9JKE2 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.39□□□□□ -2.19
Trem1Q9JKE2 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.39□□□□□ -2.19
Trem1Q9JKE2 Gm24172-201ENSMUST00000104127 117 ntBASIC1.38□□□□□ -2.19
Trem1Q9JKE2 Gm22316-201ENSMUST00000158012 216 ntBASIC1.38□□□□□ -2.19
Trem1Q9JKE2 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC1.38□□□□□ -2.19
Trem1Q9JKE2 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.38□□□□□ -2.19
Trem1Q9JKE2 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC1.38□□□□□ -2.19
Trem1Q9JKE2 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Trem1Q9JKE2 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Trem1Q9JKE2 Snora3-201ENSMUST00000083082 132 ntBASIC1.38□□□□□ -2.19
Trem1Q9JKE2 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.38□□□□□ -2.19
Trem1Q9JKE2 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Trem1Q9JKE2 Gm23175-201ENSMUST00000104371 132 ntBASIC1.37□□□□□ -2.19
Trem1Q9JKE2 Gm23551-201ENSMUST00000116852 121 ntBASIC1.37□□□□□ -2.19
Trem1Q9JKE2 Gm12584-201ENSMUST00000117109 1105 ntBASIC1.37□□□□□ -2.19
Trem1Q9JKE2 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC1.37□□□□□ -2.19
Trem1Q9JKE2 Gm26278-201ENSMUST00000157098 132 ntBASIC1.37□□□□□ -2.19
Trem1Q9JKE2 Gm26405-201ENSMUST00000158495 100 ntBASIC1.37□□□□□ -2.19
Trem1Q9JKE2 Gm24229-201ENSMUST00000158830 118 ntBASIC1.37□□□□□ -2.19
Trem1Q9JKE2 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.37□□□□□ -2.19
Trem1Q9JKE2 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Trem1Q9JKE2 Gm27711-201ENSMUST00000183802 118 ntBASIC1.37□□□□□ -2.19
Trem1Q9JKE2 Mir195b-201ENSMUST00000184814 97 ntBASIC1.37□□□□□ -2.19
Trem1Q9JKE2 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Trem1Q9JKE2 Gm28740-201ENSMUST00000186142 215 ntBASIC1.37□□□□□ -2.19
Trem1Q9JKE2 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Trem1Q9JKE2 Gm37869-201ENSMUST00000193385 595 ntBASIC1.37□□□□□ -2.19
Trem1Q9JKE2 Gm37641-201ENSMUST00000193837 239 ntBASIC1.37□□□□□ -2.19
Trem1Q9JKE2 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC1.37□□□□□ -2.19
Trem1Q9JKE2 Gm25475-201ENSMUST00000082825 180 ntBASIC1.37□□□□□ -2.19
Trem1Q9JKE2 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Trem1Q9JKE2 Gm23907-201ENSMUST00000104595 189 ntBASIC1.36□□□□□ -2.19
Trem1Q9JKE2 Gm14823-201ENSMUST00000117698 238 ntBASIC1.36□□□□□ -2.19
Trem1Q9JKE2 Gm14937-201ENSMUST00000119709 208 ntBASIC1.36□□□□□ -2.19
Trem1Q9JKE2 Gm15214-201ENSMUST00000122155 470 ntBASIC1.36□□□□□ -2.19
Trem1Q9JKE2 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC1.36□□□□□ -2.19
Trem1Q9JKE2 Gm22559-201ENSMUST00000157329 134 ntBASIC1.36□□□□□ -2.19
Trem1Q9JKE2 Gm24348-201ENSMUST00000158710 130 ntBASIC1.36□□□□□ -2.19
Trem1Q9JKE2 Mir7675-201ENSMUST00000184262 58 ntBASIC1.36□□□□□ -2.19
Trem1Q9JKE2 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.36□□□□□ -2.19
Trem1Q9JKE2 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.36□□□□□ -2.19
Trem1Q9JKE2 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.36□□□□□ -2.19
Trem1Q9JKE2 Gm44181-201ENSMUST00000203106 483 ntBASIC1.36□□□□□ -2.19
Trem1Q9JKE2 Gm45456-201ENSMUST00000210841 243 ntBASIC1.36□□□□□ -2.19
Trem1Q9JKE2 Gm35558-203ENSMUST00000222264 204 ntBASIC1.36□□□□□ -2.19
Trem1Q9JKE2 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.36□□□□□ -2.19
Trem1Q9JKE2 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.36□□□□□ -2.19
Trem1Q9JKE2 Gm25495-201ENSMUST00000104431 131 ntBASIC1.35□□□□□ -2.19
Trem1Q9JKE2 Gm22193-201ENSMUST00000116868 76 ntBASIC1.35□□□□□ -2.19
Trem1Q9JKE2 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.35□□□□□ -2.19
Trem1Q9JKE2 Gm23656-201ENSMUST00000122626 112 ntBASIC1.35□□□□□ -2.19
Trem1Q9JKE2 Rnu7-201ENSMUST00000158458 62 ntBASIC1.35□□□□□ -2.19
Trem1Q9JKE2 Gm25121-201ENSMUST00000179846 79 ntBASIC1.35□□□□□ -2.19
Trem1Q9JKE2 Mir7047-201ENSMUST00000184595 64 ntBASIC1.35□□□□□ -2.19
Trem1Q9JKE2 Gm21064-202ENSMUST00000190583 278 ntBASIC1.35□□□□□ -2.19
Trem1Q9JKE2 Gm44337-201ENSMUST00000196553 114 ntBASIC1.35□□□□□ -2.19
Trem1Q9JKE2 AC124772.1-201ENSMUST00000221325 151 ntBASIC1.35□□□□□ -2.19
Trem1Q9JKE2 Gm26066-201ENSMUST00000083385 109 ntBASIC1.35□□□□□ -2.19
Trem1Q9JKE2 Mir340-201ENSMUST00000083483 98 ntBASIC1.35□□□□□ -2.19
Trem1Q9JKE2 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.35□□□□□ -2.19
Trem1Q9JKE2 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.35□□□□□ -2.19
Trem1Q9JKE2 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Trem1Q9JKE2 Gm24596-201ENSMUST00000122504 107 ntBASIC1.34□□□□□ -2.19
Trem1Q9JKE2 Trav20-201ENSMUST00000142754 347 ntBASIC1.34□□□□□ -2.19
Trem1Q9JKE2 Gm26149-201ENSMUST00000157432 108 ntBASIC1.34□□□□□ -2.19
Trem1Q9JKE2 Gm24962-201ENSMUST00000157917 109 ntBASIC1.34□□□□□ -2.19
Trem1Q9JKE2 Gm24584-201ENSMUST00000157972 107 ntBASIC1.34□□□□□ -2.19
Trem1Q9JKE2 Gm22537-201ENSMUST00000158172 199 ntBASIC1.34□□□□□ -2.19
Trem1Q9JKE2 Gm22944-201ENSMUST00000158662 133 ntBASIC1.34□□□□□ -2.19
Trem1Q9JKE2 Gm25211-201ENSMUST00000177553 107 ntBASIC1.34□□□□□ -2.19
Trem1Q9JKE2 Gm24540-201ENSMUST00000177627 107 ntBASIC1.34□□□□□ -2.19
Trem1Q9JKE2 Gm25256-201ENSMUST00000177746 107 ntBASIC1.34□□□□□ -2.19
Trem1Q9JKE2 Gm22822-201ENSMUST00000177941 107 ntBASIC1.34□□□□□ -2.19
Trem1Q9JKE2 Rnu6-201ENSMUST00000178023 107 ntBASIC1.34□□□□□ -2.19
Trem1Q9JKE2 Gm23151-201ENSMUST00000178061 107 ntBASIC1.34□□□□□ -2.19
Trem1Q9JKE2 Gm25245-201ENSMUST00000178139 107 ntBASIC1.34□□□□□ -2.19
Trem1Q9JKE2 Gm24753-201ENSMUST00000178183 107 ntBASIC1.34□□□□□ -2.19
Trem1Q9JKE2 Gm25829-201ENSMUST00000178275 107 ntBASIC1.34□□□□□ -2.19
Trem1Q9JKE2 Gm22092-201ENSMUST00000178290 107 ntBASIC1.34□□□□□ -2.19
Trem1Q9JKE2 Gm24486-201ENSMUST00000178420 107 ntBASIC1.34□□□□□ -2.19
Trem1Q9JKE2 Gm23217-201ENSMUST00000178482 107 ntBASIC1.34□□□□□ -2.19
Trem1Q9JKE2 Gm26245-201ENSMUST00000178491 107 ntBASIC1.34□□□□□ -2.19
Trem1Q9JKE2 Gm23610-201ENSMUST00000178659 107 ntBASIC1.34□□□□□ -2.19
Trem1Q9JKE2 Gm23092-201ENSMUST00000178688 107 ntBASIC1.34□□□□□ -2.19
Trem1Q9JKE2 Gm25709-201ENSMUST00000178844 107 ntBASIC1.34□□□□□ -2.19
Trem1Q9JKE2 Gm25547-201ENSMUST00000178877 107 ntBASIC1.34□□□□□ -2.19
Trem1Q9JKE2 Gm25312-201ENSMUST00000178972 107 ntBASIC1.34□□□□□ -2.19
Trem1Q9JKE2 Gm24722-201ENSMUST00000179017 107 ntBASIC1.34□□□□□ -2.19
Trem1Q9JKE2 Gm22969-201ENSMUST00000179018 107 ntBASIC1.34□□□□□ -2.19
Trem1Q9JKE2 Gm25101-201ENSMUST00000179057 107 ntBASIC1.34□□□□□ -2.19
Trem1Q9JKE2 Gm26378-201ENSMUST00000179093 107 ntBASIC1.34□□□□□ -2.19
Trem1Q9JKE2 Gm24873-201ENSMUST00000179101 107 ntBASIC1.34□□□□□ -2.19
Trem1Q9JKE2 Gm23934-201ENSMUST00000179111 107 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms