Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Gm44301-201ENSMUST00000200362 143 ntBASIC0.67□□□□□ -2.3
Trem3Q9JKE1 Gm2628-201ENSMUST00000218019 426 ntBASIC0.67□□□□□ -2.3
Trem3Q9JKE1 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
Trem3Q9JKE1 Mir10a-201ENSMUST00000083585 110 ntBASIC0.67□□□□□ -2.3
Trem3Q9JKE1 Snord35a-201ENSMUST00000083884 90 ntBASIC0.67□□□□□ -2.3
Trem3Q9JKE1 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC0.67□□□□□ -2.3
Trem3Q9JKE1 Gm42718-201ENSMUST00000197319 2681 ntBASIC0.67□□□□□ -2.3
Trem3Q9JKE1 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.66□□□□□ -2.3
Trem3Q9JKE1 Gm25563-201ENSMUST00000104603 74 ntBASIC0.66□□□□□ -2.3
Trem3Q9JKE1 Gm13356-201ENSMUST00000121678 335 ntBASIC0.66□□□□□ -2.3
Trem3Q9JKE1 Gm23277-201ENSMUST00000157914 136 ntBASIC0.66□□□□□ -2.3
Trem3Q9JKE1 Gm24808-201ENSMUST00000157993 118 ntBASIC0.66□□□□□ -2.3
Trem3Q9JKE1 Rnu7-201ENSMUST00000158458 62 ntBASIC0.66□□□□□ -2.3
Trem3Q9JKE1 Gm22668-201ENSMUST00000158716 260 ntBASIC0.66□□□□□ -2.3
Trem3Q9JKE1 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
Trem3Q9JKE1 Gm24168-201ENSMUST00000178825 107 ntBASIC0.66□□□□□ -2.3
Trem3Q9JKE1 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC0.66□□□□□ -2.3
Trem3Q9JKE1 Gm29134-201ENSMUST00000186579 126 ntBASIC0.66□□□□□ -2.3
Trem3Q9JKE1 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC0.66□□□□□ -2.3
Trem3Q9JKE1 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
Trem3Q9JKE1 Gm28337-201ENSMUST00000190425 666 ntBASIC0.66□□□□□ -2.3
Trem3Q9JKE1 Gm37727-201ENSMUST00000191637 819 ntBASIC0.66□□□□□ -2.3
Trem3Q9JKE1 Gm31123-201ENSMUST00000192094 666 ntBASIC0.66□□□□□ -2.3
Trem3Q9JKE1 Gm37693-201ENSMUST00000194562 234 ntBASIC0.66□□□□□ -2.3
Trem3Q9JKE1 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC0.66□□□□□ -2.3
Trem3Q9JKE1 Gm18971-201ENSMUST00000197240 374 ntBASIC0.66□□□□□ -2.3
Trem3Q9JKE1 AC126267.1-201ENSMUST00000214282 284 ntBASIC0.66□□□□□ -2.3
Trem3Q9JKE1 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
Trem3Q9JKE1 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC0.65□□□□□ -2.31
Trem3Q9JKE1 Gm14923-201ENSMUST00000118270 155 ntBASIC0.65□□□□□ -2.31
Trem3Q9JKE1 Gm15266-201ENSMUST00000119635 255 ntBASIC0.65□□□□□ -2.31
Trem3Q9JKE1 Gm26150-201ENSMUST00000157426 151 ntBASIC0.65□□□□□ -2.31
Trem3Q9JKE1 Gm24668-201ENSMUST00000158935 104 ntBASIC0.65□□□□□ -2.31
Trem3Q9JKE1 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC0.65□□□□□ -2.31
Trem3Q9JKE1 Gm20386-201ENSMUST00000174010 132 ntBASIC0.65□□□□□ -2.31
Trem3Q9JKE1 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
Trem3Q9JKE1 Gm28011-201ENSMUST00000184097 175 ntBASIC0.65□□□□□ -2.31
Trem3Q9JKE1 Gm37757-201ENSMUST00000193072 210 ntBASIC0.65□□□□□ -2.31
Trem3Q9JKE1 Mir6962-201ENSMUST00000199512 63 ntBASIC0.65□□□□□ -2.31
Trem3Q9JKE1 AC127371.3-201ENSMUST00000228129 415 ntBASIC0.65□□□□□ -2.31
Trem3Q9JKE1 Gm26224-201ENSMUST00000082506 80 ntBASIC0.65□□□□□ -2.31
Trem3Q9JKE1 Gm24536-201ENSMUST00000083144 107 ntBASIC0.65□□□□□ -2.31
Trem3Q9JKE1 Gm18795-202ENSMUST00000223373 2920 ntBASIC0.65□□□□□ -2.31
Trem3Q9JKE1 Mir466n-201ENSMUST00000104798 94 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm11358-201ENSMUST00000122310 373 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm13368-201ENSMUST00000122443 430 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm22221-201ENSMUST00000157362 103 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm24439-201ENSMUST00000157894 117 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm9022-202ENSMUST00000183285 483 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm28110-201ENSMUST00000185782 315 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm29057-201ENSMUST00000186468 315 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm28737-201ENSMUST00000186808 315 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm29147-201ENSMUST00000186846 315 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm29118-201ENSMUST00000186908 315 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm28433-201ENSMUST00000187085 315 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm29227-201ENSMUST00000187139 315 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm28759-201ENSMUST00000187621 315 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm28831-201ENSMUST00000187739 315 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm28200-201ENSMUST00000187778 315 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm29034-201ENSMUST00000188099 315 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm28752-201ENSMUST00000188340 315 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm28474-201ENSMUST00000188501 315 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm29378-201ENSMUST00000188723 315 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm28569-201ENSMUST00000188748 315 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm28120-201ENSMUST00000188812 315 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm28369-201ENSMUST00000188993 315 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm28537-201ENSMUST00000189026 315 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm28909-201ENSMUST00000189406 315 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm28861-201ENSMUST00000189681 315 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm28717-201ENSMUST00000189950 315 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm29180-201ENSMUST00000190003 315 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm29575-201ENSMUST00000190597 315 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm29631-201ENSMUST00000191065 315 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm28160-201ENSMUST00000191229 315 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm29469-201ENSMUST00000191448 315 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm37923-201ENSMUST00000191624 161 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm37658-201ENSMUST00000192672 315 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm38041-201ENSMUST00000194445 661 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm17771-201ENSMUST00000194477 1147 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm37129-201ENSMUST00000195791 315 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm45232-201ENSMUST00000207811 162 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 AC069561.2-201ENSMUST00000217596 420 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
Trem3Q9JKE1 AC170600.1-201ENSMUST00000228763 277 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm24977-201ENSMUST00000083106 163 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Snora34-201ENSMUST00000083402 138 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Mir452-201ENSMUST00000093629 85 ntBASIC0.64□□□□□ -2.31
Trem3Q9JKE1 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
Trem3Q9JKE1 Gm24282-201ENSMUST00000104232 66 ntBASIC0.63□□□□□ -2.31
Trem3Q9JKE1 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC0.63□□□□□ -2.31
Trem3Q9JKE1 Gm23390-201ENSMUST00000157393 106 ntBASIC0.63□□□□□ -2.31
Trem3Q9JKE1 Gm24942-201ENSMUST00000158328 114 ntBASIC0.63□□□□□ -2.31
Trem3Q9JKE1 Gm24897-201ENSMUST00000179033 107 ntBASIC0.63□□□□□ -2.31
Trem3Q9JKE1 Gm27271-201ENSMUST00000183509 170 ntBASIC0.63□□□□□ -2.31
Trem3Q9JKE1 Gm27898-201ENSMUST00000183987 80 ntBASIC0.63□□□□□ -2.31
Trem3Q9JKE1 Mir3569-201ENSMUST00000185080 58 ntBASIC0.63□□□□□ -2.31
Trem3Q9JKE1 Gm36984-201ENSMUST00000192770 235 ntBASIC0.63□□□□□ -2.31
Trem3Q9JKE1 Gm38113-201ENSMUST00000193704 201 ntBASIC0.63□□□□□ -2.31
Trem3Q9JKE1 Gm42834-201ENSMUST00000196845 256 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms