Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Trim54Q9ERP3 Gm24618-201ENSMUST00000177718 94 ntBASIC2.76□□□□□ -1.97
Trim54Q9ERP3 Gm23953-201ENSMUST00000178214 94 ntBASIC2.76□□□□□ -1.97
Trim54Q9ERP3 Gm26332-201ENSMUST00000179813 94 ntBASIC2.76□□□□□ -1.97
Trim54Q9ERP3 Gm22863-201ENSMUST00000180265 94 ntBASIC2.76□□□□□ -1.97
Trim54Q9ERP3 Gm27220-201ENSMUST00000183453 262 ntBASIC2.76□□□□□ -1.97
Trim54Q9ERP3 Gm44010-201ENSMUST00000204432 331 ntBASIC2.76□□□□□ -1.97
Trim54Q9ERP3 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC2.76□□□□□ -1.97
Trim54Q9ERP3 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC2.76□□□□□ -1.97
Trim54Q9ERP3 Gm6796-201ENSMUST00000211919 243 ntBASIC2.76□□□□□ -1.97
Trim54Q9ERP3 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC2.76□□□□□ -1.97
Trim54Q9ERP3 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.76□□□□□ -1.97
Trim54Q9ERP3 Gm9318-201ENSMUST00000222444 438 ntBASIC2.76□□□□□ -1.97
Trim54Q9ERP3 Mir127-201ENSMUST00000093568 70 ntBASIC2.76□□□□□ -1.97
Trim54Q9ERP3 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
Trim54Q9ERP3 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Trim54Q9ERP3 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.75□□□□□ -1.97
Trim54Q9ERP3 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Trim54Q9ERP3 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Trim54Q9ERP3 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.75□□□□□ -1.97
Trim54Q9ERP3 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.75□□□□□ -1.97
Trim54Q9ERP3 Gm26341-201ENSMUST00000104561 134 ntBASIC2.75□□□□□ -1.97
Trim54Q9ERP3 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.75□□□□□ -1.97
Trim54Q9ERP3 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.75□□□□□ -1.97
Trim54Q9ERP3 Gm14770-201ENSMUST00000122197 312 ntBASIC2.75□□□□□ -1.97
Trim54Q9ERP3 Gm25269-201ENSMUST00000122601 104 ntBASIC2.75□□□□□ -1.97
Trim54Q9ERP3 Gm23470-201ENSMUST00000157129 120 ntBASIC2.75□□□□□ -1.97
Trim54Q9ERP3 Gm6788-201ENSMUST00000166459 270 ntBASIC2.75□□□□□ -1.97
Trim54Q9ERP3 Gm17100-201ENSMUST00000168963 272 ntBASIC2.75□□□□□ -1.97
Trim54Q9ERP3 Gm25956-201ENSMUST00000175115 217 ntBASIC2.75□□□□□ -1.97
Trim54Q9ERP3 Gm23921-201ENSMUST00000175258 107 ntBASIC2.75□□□□□ -1.97
Trim54Q9ERP3 Mir3075-201ENSMUST00000175340 85 ntBASIC2.75□□□□□ -1.97
Trim54Q9ERP3 Gm6801-201ENSMUST00000190697 339 ntBASIC2.75□□□□□ -1.97
Trim54Q9ERP3 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.75□□□□□ -1.97
Trim54Q9ERP3 AC151833.1-201ENSMUST00000227752 574 ntBASIC2.75□□□□□ -1.97
Trim54Q9ERP3 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Trim54Q9ERP3 Gm23970-201ENSMUST00000083319 107 ntBASIC2.75□□□□□ -1.97
Trim54Q9ERP3 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.75□□□□□ -1.97
Trim54Q9ERP3 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Trim54Q9ERP3 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Trim54Q9ERP3 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.75□□□□□ -1.97
Trim54Q9ERP3 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Trim54Q9ERP3 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Trim54Q9ERP3 CT030170.3-201ENSMUST00000221205 1815 ntBASIC2.75□□□□□ -1.97
Trim54Q9ERP3 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Gm6954-201ENSMUST00000117416 225 ntBASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Gm12235-201ENSMUST00000118596 170 ntBASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Gm11935-201ENSMUST00000118608 399 ntBASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Gm23889-201ENSMUST00000122689 104 ntBASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Gm14298-201ENSMUST00000139032 237 ntBASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Gm16356-201ENSMUST00000143300 169 ntBASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Gm22598-201ENSMUST00000157600 127 ntBASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Gm29512-201ENSMUST00000185544 315 ntBASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Gm28110-201ENSMUST00000185782 315 ntBASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Gm19257-201ENSMUST00000186121 183 ntBASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Gm29057-201ENSMUST00000186468 315 ntBASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Gm29661-201ENSMUST00000186781 315 ntBASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Gm28737-201ENSMUST00000186808 315 ntBASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Gm29118-201ENSMUST00000186908 315 ntBASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Gm28433-201ENSMUST00000187085 315 ntBASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Gm28759-201ENSMUST00000187621 315 ntBASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Gm28831-201ENSMUST00000187739 315 ntBASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Gm28200-201ENSMUST00000187778 315 ntBASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Gm28752-201ENSMUST00000188340 315 ntBASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Gm29378-201ENSMUST00000188723 315 ntBASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Gm28569-201ENSMUST00000188748 315 ntBASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Gm28120-201ENSMUST00000188812 315 ntBASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Gm28369-201ENSMUST00000188993 315 ntBASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Gm29037-201ENSMUST00000189092 313 ntBASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Gm28909-201ENSMUST00000189406 315 ntBASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Gm28861-201ENSMUST00000189681 315 ntBASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Gm29180-201ENSMUST00000190003 315 ntBASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Gm29575-201ENSMUST00000190597 315 ntBASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Gm29469-201ENSMUST00000191448 315 ntBASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Gm44794-201ENSMUST00000206550 411 ntBASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.74□□□□□ -1.97
Trim54Q9ERP3 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Gm24764-201ENSMUST00000083686 199 ntBASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Trim54Q9ERP3 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
Trim54Q9ERP3 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.73□□□□□ -1.97
Trim54Q9ERP3 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Trim54Q9ERP3 Gm22750-201ENSMUST00000102076 103 ntBASIC2.73□□□□□ -1.97
Trim54Q9ERP3 Gm22752-201ENSMUST00000102083 109 ntBASIC2.73□□□□□ -1.97
Trim54Q9ERP3 Gm25526-201ENSMUST00000104332 132 ntBASIC2.73□□□□□ -1.97
Trim54Q9ERP3 Gm26015-201ENSMUST00000104402 125 ntBASIC2.73□□□□□ -1.97
Trim54Q9ERP3 Gm12042-201ENSMUST00000120479 301 ntBASIC2.73□□□□□ -1.97
Trim54Q9ERP3 Gm12617-201ENSMUST00000121268 381 ntBASIC2.73□□□□□ -1.97
Trim54Q9ERP3 Gm22011-201ENSMUST00000158790 123 ntBASIC2.73□□□□□ -1.97
Trim54Q9ERP3 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Trim54Q9ERP3 Gm27761-201ENSMUST00000184091 131 ntBASIC2.73□□□□□ -1.97
Trim54Q9ERP3 Gm43600-201ENSMUST00000202134 223 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 127.3 ms