Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm29134-201ENSMUST00000186579 126 ntBASIC1.21□□□□□ -2.22
Lima1Q9ERG0 Gm28337-201ENSMUST00000190425 666 ntBASIC1.21□□□□□ -2.22
Lima1Q9ERG0 Gm31123-201ENSMUST00000192094 666 ntBASIC1.21□□□□□ -2.22
Lima1Q9ERG0 Gm38041-201ENSMUST00000194445 661 ntBASIC1.21□□□□□ -2.22
Lima1Q9ERG0 Gm2829-201ENSMUST00000213121 499 ntBASIC1.21□□□□□ -2.22
Lima1Q9ERG0 Gm24268-201ENSMUST00000082990 110 ntBASIC1.21□□□□□ -2.22
Lima1Q9ERG0 Gm23462-201ENSMUST00000083264 104 ntBASIC1.21□□□□□ -2.22
Lima1Q9ERG0 Gm38388-201ENSMUST00000195569 1430 ntBASIC1.21□□□□□ -2.22
Lima1Q9ERG0 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.21□□□□□ -2.22
Lima1Q9ERG0 Gm22750-201ENSMUST00000102076 103 ntBASIC1.2□□□□□ -2.22
Lima1Q9ERG0 Gm13672-201ENSMUST00000117554 459 ntBASIC1.2□□□□□ -2.22
Lima1Q9ERG0 Gm15162-201ENSMUST00000119325 283 ntBASIC1.2□□□□□ -2.22
Lima1Q9ERG0 Gm15266-201ENSMUST00000119635 255 ntBASIC1.2□□□□□ -2.22
Lima1Q9ERG0 Gm24892-201ENSMUST00000122747 104 ntBASIC1.2□□□□□ -2.22
Lima1Q9ERG0 Gm23352-201ENSMUST00000158428 64 ntBASIC1.2□□□□□ -2.22
Lima1Q9ERG0 Gm22944-201ENSMUST00000158662 133 ntBASIC1.2□□□□□ -2.22
Lima1Q9ERG0 Mir6355-201ENSMUST00000183687 106 ntBASIC1.2□□□□□ -2.22
Lima1Q9ERG0 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC1.2□□□□□ -2.22
Lima1Q9ERG0 Mir7118-201ENSMUST00000197760 61 ntBASIC1.2□□□□□ -2.22
Lima1Q9ERG0 Gm43513-201ENSMUST00000199779 1076 ntBASIC1.2□□□□□ -2.22
Lima1Q9ERG0 Mir1291-201ENSMUST00000199842 117 ntBASIC1.2□□□□□ -2.22
Lima1Q9ERG0 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC1.2□□□□□ -2.22
Lima1Q9ERG0 Gm44654-201ENSMUST00000208052 329 ntBASIC1.2□□□□□ -2.22
Lima1Q9ERG0 AC159885.1-201ENSMUST00000222221 199 ntBASIC1.2□□□□□ -2.22
Lima1Q9ERG0 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.2□□□□□ -2.22
Lima1Q9ERG0 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.2□□□□□ -2.22
Lima1Q9ERG0 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Lima1Q9ERG0 Mir450-2-201ENSMUST00000102444 69 ntBASIC1.19□□□□□ -2.22
Lima1Q9ERG0 Gm26080-201ENSMUST00000104069 131 ntBASIC1.19□□□□□ -2.22
Lima1Q9ERG0 Mir465c-2-201ENSMUST00000104757 81 ntBASIC1.19□□□□□ -2.22
Lima1Q9ERG0 Gm15010-201ENSMUST00000117153 407 ntBASIC1.19□□□□□ -2.22
Lima1Q9ERG0 Gm15861-201ENSMUST00000120979 339 ntBASIC1.19□□□□□ -2.22
Lima1Q9ERG0 Gm24598-201ENSMUST00000122510 74 ntBASIC1.19□□□□□ -2.22
Lima1Q9ERG0 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.19□□□□□ -2.22
Lima1Q9ERG0 Gm23331-201ENSMUST00000157423 108 ntBASIC1.19□□□□□ -2.22
Lima1Q9ERG0 Gm22099-201ENSMUST00000157925 123 ntBASIC1.19□□□□□ -2.22
Lima1Q9ERG0 Gm22537-201ENSMUST00000158172 199 ntBASIC1.19□□□□□ -2.22
Lima1Q9ERG0 Gm26363-201ENSMUST00000158866 83 ntBASIC1.19□□□□□ -2.22
Lima1Q9ERG0 Mir6419-201ENSMUST00000184784 113 ntBASIC1.19□□□□□ -2.22
Lima1Q9ERG0 Gm37923-201ENSMUST00000191624 161 ntBASIC1.19□□□□□ -2.22
Lima1Q9ERG0 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.19□□□□□ -2.22
Lima1Q9ERG0 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC1.19□□□□□ -2.22
Lima1Q9ERG0 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.19□□□□□ -2.22
Lima1Q9ERG0 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.19□□□□□ -2.22
Lima1Q9ERG0 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.19□□□□□ -2.22
Lima1Q9ERG0 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Lima1Q9ERG0 AC124569.4-201ENSMUST00000223830 1220 ntBASIC1.19□□□□□ -2.22
Lima1Q9ERG0 AC156790.3-201ENSMUST00000226200 254 ntBASIC1.19□□□□□ -2.22
Lima1Q9ERG0 AC164304.1-201ENSMUST00000226920 272 ntBASIC1.19□□□□□ -2.22
Lima1Q9ERG0 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Lima1Q9ERG0 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Lima1Q9ERG0 Mir465c-1-201ENSMUST00000093560 81 ntBASIC1.19□□□□□ -2.22
Lima1Q9ERG0 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.19□□□□□ -2.22
Lima1Q9ERG0 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Lima1Q9ERG0 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Lima1Q9ERG0 Gm26384-201ENSMUST00000102183 110 ntBASIC1.18□□□□□ -2.22
Lima1Q9ERG0 Gm15365-201ENSMUST00000122392 300 ntBASIC1.18□□□□□ -2.22
Lima1Q9ERG0 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.18□□□□□ -2.22
Lima1Q9ERG0 Gm23289-201ENSMUST00000175615 108 ntBASIC1.18□□□□□ -2.22
Lima1Q9ERG0 Gm27490-201ENSMUST00000184754 128 ntBASIC1.18□□□□□ -2.22
Lima1Q9ERG0 Gm42774-201ENSMUST00000198854 283 ntBASIC1.18□□□□□ -2.22
Lima1Q9ERG0 Gm44923-201ENSMUST00000206673 85 ntBASIC1.18□□□□□ -2.22
Lima1Q9ERG0 Gm45658-201ENSMUST00000209197 580 ntBASIC1.18□□□□□ -2.22
Lima1Q9ERG0 AC130829.3-201ENSMUST00000222735 154 ntBASIC1.18□□□□□ -2.22
Lima1Q9ERG0 CT025689.4-201ENSMUST00000225926 601 ntBASIC1.18□□□□□ -2.22
Lima1Q9ERG0 Gm22572-201ENSMUST00000082985 105 ntBASIC1.18□□□□□ -2.22
Lima1Q9ERG0 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Lima1Q9ERG0 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Lima1Q9ERG0 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
Lima1Q9ERG0 Gm23000-201ENSMUST00000157083 139 ntBASIC1.17□□□□□ -2.22
Lima1Q9ERG0 Gm24241-201ENSMUST00000157787 145 ntBASIC1.17□□□□□ -2.22
Lima1Q9ERG0 Gm24962-201ENSMUST00000157917 109 ntBASIC1.17□□□□□ -2.22
Lima1Q9ERG0 Gm23317-201ENSMUST00000157999 129 ntBASIC1.17□□□□□ -2.22
Lima1Q9ERG0 Gm24862-201ENSMUST00000179103 79 ntBASIC1.17□□□□□ -2.22
Lima1Q9ERG0 Gm23310-201ENSMUST00000179105 79 ntBASIC1.17□□□□□ -2.22
Lima1Q9ERG0 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
Lima1Q9ERG0 Gm25461-201ENSMUST00000179293 79 ntBASIC1.17□□□□□ -2.22
Lima1Q9ERG0 Gm28794-201ENSMUST00000185276 136 ntBASIC1.17□□□□□ -2.22
Lima1Q9ERG0 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC1.17□□□□□ -2.22
Lima1Q9ERG0 Trav5d-2-201ENSMUST00000196107 275 ntBASIC1.17□□□□□ -2.22
Lima1Q9ERG0 Trav5n-2-201ENSMUST00000197136 275 ntBASIC1.17□□□□□ -2.22
Lima1Q9ERG0 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.17□□□□□ -2.22
Lima1Q9ERG0 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC1.17□□□□□ -2.22
Lima1Q9ERG0 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.17□□□□□ -2.22
Lima1Q9ERG0 Gm25475-201ENSMUST00000082825 180 ntBASIC1.17□□□□□ -2.22
Lima1Q9ERG0 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Lima1Q9ERG0 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Lima1Q9ERG0 Gm25377-201ENSMUST00000104334 129 ntBASIC1.16□□□□□ -2.22
Lima1Q9ERG0 Gm23336-201ENSMUST00000117023 123 ntBASIC1.16□□□□□ -2.22
Lima1Q9ERG0 Gm11606-201ENSMUST00000120706 617 ntBASIC1.16□□□□□ -2.22
Lima1Q9ERG0 Gm5396-201ENSMUST00000121222 532 ntBASIC1.16□□□□□ -2.22
Lima1Q9ERG0 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.16□□□□□ -2.22
Lima1Q9ERG0 Gm24481-201ENSMUST00000157210 102 ntBASIC1.16□□□□□ -2.22
Lima1Q9ERG0 Gm24480-201ENSMUST00000157442 103 ntBASIC1.16□□□□□ -2.22
Lima1Q9ERG0 Traj60-201ENSMUST00000167781 54 ntBASIC1.16□□□□□ -2.22
Lima1Q9ERG0 Gm20613-201ENSMUST00000175828 345 ntBASIC1.16□□□□□ -2.22
Lima1Q9ERG0 Mir7063-201ENSMUST00000184158 91 ntBASIC1.16□□□□□ -2.22
Lima1Q9ERG0 Gm19123-201ENSMUST00000190716 651 ntBASIC1.16□□□□□ -2.22
Lima1Q9ERG0 Gm37641-201ENSMUST00000193837 239 ntBASIC1.16□□□□□ -2.22
Lima1Q9ERG0 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC1.16□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms