Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm24862-201ENSMUST00000179103 79 ntBASIC2.01□□□□□ -2.09
Scn4aQ9ER60 Gm23310-201ENSMUST00000179105 79 ntBASIC2.01□□□□□ -2.09
Scn4aQ9ER60 Gm25461-201ENSMUST00000179293 79 ntBASIC2.01□□□□□ -2.09
Scn4aQ9ER60 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Scn4aQ9ER60 Gm18185-201ENSMUST00000186725 667 ntBASIC2.01□□□□□ -2.09
Scn4aQ9ER60 Gm43431-201ENSMUST00000198577 340 ntBASIC2.01□□□□□ -2.09
Scn4aQ9ER60 Gm45375-201ENSMUST00000210338 280 ntBASIC2.01□□□□□ -2.09
Scn4aQ9ER60 CT010480.1-201ENSMUST00000223612 363 ntBASIC2.01□□□□□ -2.09
Scn4aQ9ER60 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC2□□□□□ -2.09
Scn4aQ9ER60 Gm17132-201ENSMUST00000109542 1158 ntBASIC2□□□□□ -2.09
Scn4aQ9ER60 Gm13331-201ENSMUST00000117500 448 ntBASIC2□□□□□ -2.09
Scn4aQ9ER60 AA413626-201ENSMUST00000121125 494 ntBASIC2□□□□□ -2.09
Scn4aQ9ER60 Gm15529-201ENSMUST00000121833 994 ntBASIC2□□□□□ -2.09
Scn4aQ9ER60 Gm22555-201ENSMUST00000157801 62 ntBASIC2□□□□□ -2.09
Scn4aQ9ER60 Gm24997-201ENSMUST00000157910 105 ntBASIC2□□□□□ -2.09
Scn4aQ9ER60 Gm25247-201ENSMUST00000175475 90 ntBASIC2□□□□□ -2.09
Scn4aQ9ER60 Gm23144-201ENSMUST00000180226 107 ntBASIC2□□□□□ -2.09
Scn4aQ9ER60 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC2□□□□□ -2.09
Scn4aQ9ER60 Gm44825-201ENSMUST00000207557 150 ntBASIC2□□□□□ -2.09
Scn4aQ9ER60 Gm44598-201ENSMUST00000207566 150 ntBASIC2□□□□□ -2.09
Scn4aQ9ER60 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC2□□□□□ -2.09
Scn4aQ9ER60 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC2□□□□□ -2.09
Scn4aQ9ER60 AC167192.2-201ENSMUST00000224794 198 ntBASIC2□□□□□ -2.09
Scn4aQ9ER60 Gm23462-201ENSMUST00000083264 104 ntBASIC2□□□□□ -2.09
Scn4aQ9ER60 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC2□□□□□ -2.09
Scn4aQ9ER60 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC2□□□□□ -2.09
Scn4aQ9ER60 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2□□□□□ -2.09
Scn4aQ9ER60 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Scn4aQ9ER60 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
Scn4aQ9ER60 Mir687-201ENSMUST00000102166 89 ntBASIC1.99□□□□□ -2.09
Scn4aQ9ER60 Gm14293-201ENSMUST00000118528 577 ntBASIC1.99□□□□□ -2.09
Scn4aQ9ER60 Gm25051-201ENSMUST00000158602 249 ntBASIC1.99□□□□□ -2.09
Scn4aQ9ER60 Gm25020-201ENSMUST00000178071 107 ntBASIC1.99□□□□□ -2.09
Scn4aQ9ER60 Gm27385-201ENSMUST00000184747 104 ntBASIC1.99□□□□□ -2.09
Scn4aQ9ER60 Mir6540-201ENSMUST00000184886 108 ntBASIC1.99□□□□□ -2.09
Scn4aQ9ER60 Gm45288-201ENSMUST00000210236 151 ntBASIC1.99□□□□□ -2.09
Scn4aQ9ER60 AC125020.2-201ENSMUST00000218894 348 ntBASIC1.99□□□□□ -2.09
Scn4aQ9ER60 AC124772.1-201ENSMUST00000221325 151 ntBASIC1.99□□□□□ -2.09
Scn4aQ9ER60 Gm23093-201ENSMUST00000083450 102 ntBASIC1.99□□□□□ -2.09
Scn4aQ9ER60 Mir30d-201ENSMUST00000083503 82 ntBASIC1.99□□□□□ -2.09
Scn4aQ9ER60 Gm23040-201ENSMUST00000083869 163 ntBASIC1.99□□□□□ -2.09
Scn4aQ9ER60 Olfr575-201ENSMUST00000084812 957 ntBASIC1.99□□□□□ -2.09
Scn4aQ9ER60 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Scn4aQ9ER60 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Scn4aQ9ER60 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Scn4aQ9ER60 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC1.98□□□□□ -2.09
Scn4aQ9ER60 AC122393.3-201ENSMUST00000226343 1059 ntBASIC1.98□□□□□ -2.09
Scn4aQ9ER60 Gm37761-201ENSMUST00000194989 2098 ntBASIC1.98□□□□□ -2.09
Scn4aQ9ER60 Gm23422-201ENSMUST00000102000 107 ntBASIC1.98□□□□□ -2.09
Scn4aQ9ER60 Gm14558-201ENSMUST00000117458 381 ntBASIC1.98□□□□□ -2.09
Scn4aQ9ER60 Gm7916-201ENSMUST00000120325 456 ntBASIC1.98□□□□□ -2.09
Scn4aQ9ER60 Gm23589-201ENSMUST00000157660 105 ntBASIC1.98□□□□□ -2.09
Scn4aQ9ER60 Gm23379-201ENSMUST00000180026 107 ntBASIC1.98□□□□□ -2.09
Scn4aQ9ER60 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Scn4aQ9ER60 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Scn4aQ9ER60 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.98□□□□□ -2.09
Scn4aQ9ER60 Gm45730-201ENSMUST00000212560 395 ntBASIC1.98□□□□□ -2.09
Scn4aQ9ER60 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.98□□□□□ -2.09
Scn4aQ9ER60 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC1.98□□□□□ -2.09
Scn4aQ9ER60 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Scn4aQ9ER60 Gm25506-201ENSMUST00000104339 70 ntBASIC1.97□□□□□ -2.09
Scn4aQ9ER60 Gm12646-201ENSMUST00000119144 238 ntBASIC1.97□□□□□ -2.09
Scn4aQ9ER60 Gm14785-201ENSMUST00000120185 539 ntBASIC1.97□□□□□ -2.09
Scn4aQ9ER60 Gm26278-201ENSMUST00000157098 132 ntBASIC1.97□□□□□ -2.09
Scn4aQ9ER60 Gm22328-201ENSMUST00000158074 112 ntBASIC1.97□□□□□ -2.09
Scn4aQ9ER60 Gm45791-201ENSMUST00000212908 352 ntBASIC1.97□□□□□ -2.09
Scn4aQ9ER60 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Scn4aQ9ER60 AC130222.1-201ENSMUST00000221198 256 ntBASIC1.97□□□□□ -2.09
Scn4aQ9ER60 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Scn4aQ9ER60 Gm8858-201ENSMUST00000118259 342 ntBASIC1.96□□□□□ -2.1
Scn4aQ9ER60 Gm11891-201ENSMUST00000121241 619 ntBASIC1.96□□□□□ -2.1
Scn4aQ9ER60 Gm26102-201ENSMUST00000157251 284 ntBASIC1.96□□□□□ -2.1
Scn4aQ9ER60 Gm37337-201ENSMUST00000192601 993 ntBASIC1.96□□□□□ -2.1
Scn4aQ9ER60 Gm43487-201ENSMUST00000200331 1031 ntBASIC1.96□□□□□ -2.1
Scn4aQ9ER60 Gm8940-201ENSMUST00000212585 219 ntBASIC1.96□□□□□ -2.1
Scn4aQ9ER60 AC124346.1-201ENSMUST00000218539 364 ntBASIC1.96□□□□□ -2.1
Scn4aQ9ER60 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1.96□□□□□ -2.1
Scn4aQ9ER60 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC1.96□□□□□ -2.1
Scn4aQ9ER60 Gm15497-201ENSMUST00000119137 551 ntBASIC1.96□□□□□ -2.1
Scn4aQ9ER60 Gm25321-201ENSMUST00000122558 102 ntBASIC1.96□□□□□ -2.1
Scn4aQ9ER60 Gm24085-201ENSMUST00000175172 116 ntBASIC1.96□□□□□ -2.1
Scn4aQ9ER60 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
Scn4aQ9ER60 Mir7215-201ENSMUST00000200383 51 ntBASIC1.96□□□□□ -2.1
Scn4aQ9ER60 Gm29848-201ENSMUST00000203107 295 ntBASIC1.96□□□□□ -2.1
Scn4aQ9ER60 AC164297.3-201ENSMUST00000224238 94 ntBASIC1.96□□□□□ -2.1
Scn4aQ9ER60 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Scn4aQ9ER60 n-R5s197-201ENSMUST00000083302 119 ntBASIC1.96□□□□□ -2.1
Scn4aQ9ER60 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Scn4aQ9ER60 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.95□□□□□ -2.1
Scn4aQ9ER60 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Scn4aQ9ER60 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Scn4aQ9ER60 Mir669p-2-201ENSMUST00000103868 87 ntBASIC1.95□□□□□ -2.1
Scn4aQ9ER60 Mir669p-1-201ENSMUST00000103884 87 ntBASIC1.95□□□□□ -2.1
Scn4aQ9ER60 Gm23126-201ENSMUST00000104260 134 ntBASIC1.95□□□□□ -2.1
Scn4aQ9ER60 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Scn4aQ9ER60 Gm18775-201ENSMUST00000190763 586 ntBASIC1.95□□□□□ -2.1
Scn4aQ9ER60 Gm38261-201ENSMUST00000192608 316 ntBASIC1.95□□□□□ -2.1
Scn4aQ9ER60 Gm37801-201ENSMUST00000194754 274 ntBASIC1.95□□□□□ -2.1
Scn4aQ9ER60 Gm43284-201ENSMUST00000200103 253 ntBASIC1.95□□□□□ -2.1
Scn4aQ9ER60 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms