Protein–RNA interactions for Protein: Q9DAL3

Ccdc54, Coiled-coil domain-containing protein 54, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54Q9DAL3 Trbv18-201ENSMUST00000194256 294 ntBASIC1.84□□□□□ -2.11
Ccdc54Q9DAL3 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.84□□□□□ -2.11
Ccdc54Q9DAL3 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC1.84□□□□□ -2.11
Ccdc54Q9DAL3 Gm45704-201ENSMUST00000212582 403 ntBASIC1.84□□□□□ -2.11
Ccdc54Q9DAL3 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC1.84□□□□□ -2.11
Ccdc54Q9DAL3 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.84□□□□□ -2.11
Ccdc54Q9DAL3 AC109214.2-201ENSMUST00000220089 358 ntBASIC1.84□□□□□ -2.11
Ccdc54Q9DAL3 Gm33654-201ENSMUST00000221704 215 ntBASIC1.84□□□□□ -2.11
Ccdc54Q9DAL3 Gm21937-201ENSMUST00000222825 218 ntBASIC1.84□□□□□ -2.11
Ccdc54Q9DAL3 CT030182.3-201ENSMUST00000225986 582 ntBASIC1.84□□□□□ -2.11
Ccdc54Q9DAL3 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Ccdc54Q9DAL3 Gm22364-201ENSMUST00000083097 98 ntBASIC1.84□□□□□ -2.11
Ccdc54Q9DAL3 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.83□□□□□ -2.12
Ccdc54Q9DAL3 Gm24282-201ENSMUST00000104232 66 ntBASIC1.83□□□□□ -2.12
Ccdc54Q9DAL3 Gm14574-201ENSMUST00000120644 279 ntBASIC1.83□□□□□ -2.12
Ccdc54Q9DAL3 Gm23557-201ENSMUST00000157820 138 ntBASIC1.83□□□□□ -2.12
Ccdc54Q9DAL3 Gm25454-201ENSMUST00000157947 315 ntBASIC1.83□□□□□ -2.12
Ccdc54Q9DAL3 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC1.83□□□□□ -2.12
Ccdc54Q9DAL3 Mir7081-201ENSMUST00000184490 75 ntBASIC1.83□□□□□ -2.12
Ccdc54Q9DAL3 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC1.83□□□□□ -2.12
Ccdc54Q9DAL3 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC1.83□□□□□ -2.12
Ccdc54Q9DAL3 Gm37399-201ENSMUST00000195224 416 ntBASIC1.83□□□□□ -2.12
Ccdc54Q9DAL3 Gm5023-201ENSMUST00000217442 587 ntBASIC1.83□□□□□ -2.12
Ccdc54Q9DAL3 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.83□□□□□ -2.12
Ccdc54Q9DAL3 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC1.83□□□□□ -2.12
Ccdc54Q9DAL3 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.83□□□□□ -2.12
Ccdc54Q9DAL3 Gm23404-201ENSMUST00000082543 97 ntBASIC1.83□□□□□ -2.12
Ccdc54Q9DAL3 Gm23242-201ENSMUST00000083055 107 ntBASIC1.83□□□□□ -2.12
Ccdc54Q9DAL3 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Ccdc54Q9DAL3 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Ccdc54Q9DAL3 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC1.83□□□□□ -2.12
Ccdc54Q9DAL3 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Ccdc54Q9DAL3 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
Ccdc54Q9DAL3 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.82□□□□□ -2.12
Ccdc54Q9DAL3 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Ccdc54Q9DAL3 Gm26249-201ENSMUST00000116708 118 ntBASIC1.82□□□□□ -2.12
Ccdc54Q9DAL3 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC1.82□□□□□ -2.12
Ccdc54Q9DAL3 Gm13518-201ENSMUST00000120018 233 ntBASIC1.82□□□□□ -2.12
Ccdc54Q9DAL3 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.82□□□□□ -2.12
Ccdc54Q9DAL3 Gm15281-201ENSMUST00000125181 351 ntBASIC1.82□□□□□ -2.12
Ccdc54Q9DAL3 Gm6956-201ENSMUST00000134724 546 ntBASIC1.82□□□□□ -2.12
Ccdc54Q9DAL3 Gm22654-201ENSMUST00000157874 105 ntBASIC1.82□□□□□ -2.12
Ccdc54Q9DAL3 Gm25121-201ENSMUST00000179846 79 ntBASIC1.82□□□□□ -2.12
Ccdc54Q9DAL3 Mir497-201ENSMUST00000200557 84 ntBASIC1.82□□□□□ -2.12
Ccdc54Q9DAL3 Gm45315-201ENSMUST00000209283 333 ntBASIC1.82□□□□□ -2.12
Ccdc54Q9DAL3 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.82□□□□□ -2.12
Ccdc54Q9DAL3 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
Ccdc54Q9DAL3 AC163646.2-201ENSMUST00000227962 141 ntBASIC1.82□□□□□ -2.12
Ccdc54Q9DAL3 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
Ccdc54Q9DAL3 Gm26164-201ENSMUST00000083793 104 ntBASIC1.82□□□□□ -2.12
Ccdc54Q9DAL3 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.82□□□□□ -2.12
Ccdc54Q9DAL3 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Ccdc54Q9DAL3 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
Ccdc54Q9DAL3 Gm22674-201ENSMUST00000104413 131 ntBASIC1.81□□□□□ -2.12
Ccdc54Q9DAL3 Gm15010-201ENSMUST00000117153 407 ntBASIC1.81□□□□□ -2.12
Ccdc54Q9DAL3 Gm25269-201ENSMUST00000122601 104 ntBASIC1.81□□□□□ -2.12
Ccdc54Q9DAL3 Gm23331-201ENSMUST00000157423 108 ntBASIC1.81□□□□□ -2.12
Ccdc54Q9DAL3 Gm29397-201ENSMUST00000185205 333 ntBASIC1.81□□□□□ -2.12
Ccdc54Q9DAL3 Gm2719-201ENSMUST00000191929 444 ntBASIC1.81□□□□□ -2.12
Ccdc54Q9DAL3 Gm43505-201ENSMUST00000200579 139 ntBASIC1.81□□□□□ -2.12
Ccdc54Q9DAL3 Gm44811-201ENSMUST00000209120 228 ntBASIC1.81□□□□□ -2.12
Ccdc54Q9DAL3 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.81□□□□□ -2.12
Ccdc54Q9DAL3 Gm7065-201ENSMUST00000222150 474 ntBASIC1.81□□□□□ -2.12
Ccdc54Q9DAL3 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.81□□□□□ -2.12
Ccdc54Q9DAL3 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.81□□□□□ -2.12
Ccdc54Q9DAL3 Gm22978-201ENSMUST00000082607 160 ntBASIC1.81□□□□□ -2.12
Ccdc54Q9DAL3 Gm25135-201ENSMUST00000082648 143 ntBASIC1.81□□□□□ -2.12
Ccdc54Q9DAL3 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Ccdc54Q9DAL3 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
Ccdc54Q9DAL3 Mir701-201ENSMUST00000102208 109 ntBASIC1.8□□□□□ -2.12
Ccdc54Q9DAL3 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Ccdc54Q9DAL3 Gm24984-201ENSMUST00000104454 133 ntBASIC1.8□□□□□ -2.12
Ccdc54Q9DAL3 Gm24068-201ENSMUST00000104513 132 ntBASIC1.8□□□□□ -2.12
Ccdc54Q9DAL3 Mir3096-201ENSMUST00000116685 71 ntBASIC1.8□□□□□ -2.12
Ccdc54Q9DAL3 Gm25509-201ENSMUST00000116985 106 ntBASIC1.8□□□□□ -2.12
Ccdc54Q9DAL3 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.8□□□□□ -2.12
Ccdc54Q9DAL3 Gm13396-201ENSMUST00000120617 271 ntBASIC1.8□□□□□ -2.12
Ccdc54Q9DAL3 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Ccdc54Q9DAL3 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Ccdc54Q9DAL3 Gm25827-201ENSMUST00000157089 107 ntBASIC1.8□□□□□ -2.12
Ccdc54Q9DAL3 Gm24770-201ENSMUST00000158505 92 ntBASIC1.8□□□□□ -2.12
Ccdc54Q9DAL3 Gm22527-201ENSMUST00000158816 106 ntBASIC1.8□□□□□ -2.12
Ccdc54Q9DAL3 Gm24737-201ENSMUST00000158861 100 ntBASIC1.8□□□□□ -2.12
Ccdc54Q9DAL3 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
Ccdc54Q9DAL3 Gm23793-201ENSMUST00000179396 117 ntBASIC1.8□□□□□ -2.12
Ccdc54Q9DAL3 Gm27399-201ENSMUST00000184250 78 ntBASIC1.8□□□□□ -2.12
Ccdc54Q9DAL3 Igkv12-49-201ENSMUST00000197714 278 ntBASIC1.8□□□□□ -2.12
Ccdc54Q9DAL3 Gm43587-201ENSMUST00000199590 204 ntBASIC1.8□□□□□ -2.12
Ccdc54Q9DAL3 Gm45119-201ENSMUST00000207612 199 ntBASIC1.8□□□□□ -2.12
Ccdc54Q9DAL3 Gm18991-201ENSMUST00000209225 746 ntBASIC1.8□□□□□ -2.12
Ccdc54Q9DAL3 Gm45652-201ENSMUST00000210926 3831 ntBASIC1.8□□□□□ -2.12
Ccdc54Q9DAL3 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.8□□□□□ -2.12
Ccdc54Q9DAL3 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC1.8□□□□□ -2.12
Ccdc54Q9DAL3 AC154521.1-201ENSMUST00000222635 330 ntBASIC1.8□□□□□ -2.12
Ccdc54Q9DAL3 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC1.8□□□□□ -2.12
Ccdc54Q9DAL3 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Ccdc54Q9DAL3 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.8□□□□□ -2.12
Ccdc54Q9DAL3 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Ccdc54Q9DAL3 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Ccdc54Q9DAL3 Gm42770-201ENSMUST00000199657 4155 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 154.3 ms