Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm22559-201ENSMUST00000157329 134 ntBASIC1.26□□□□□ -2.21
Ccdc3Q9D6Y1 Gm18357-201ENSMUST00000188184 580 ntBASIC1.26□□□□□ -2.21
Ccdc3Q9D6Y1 Gm21064-202ENSMUST00000190583 278 ntBASIC1.26□□□□□ -2.21
Ccdc3Q9D6Y1 Gm44990-201ENSMUST00000203922 217 ntBASIC1.26□□□□□ -2.21
Ccdc3Q9D6Y1 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC1.26□□□□□ -2.21
Ccdc3Q9D6Y1 AC102291.2-201ENSMUST00000228083 367 ntBASIC1.26□□□□□ -2.21
Ccdc3Q9D6Y1 Ear14-201ENSMUST00000049559 468 ntBASIC1.26□□□□□ -2.21
Ccdc3Q9D6Y1 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Ccdc3Q9D6Y1 Gm25853-201ENSMUST00000082793 132 ntBASIC1.26□□□□□ -2.21
Ccdc3Q9D6Y1 Gm24921-201ENSMUST00000083024 107 ntBASIC1.26□□□□□ -2.21
Ccdc3Q9D6Y1 Mir448-201ENSMUST00000083516 112 ntBASIC1.26□□□□□ -2.21
Ccdc3Q9D6Y1 Mir463-201ENSMUST00000093570 75 ntBASIC1.26□□□□□ -2.21
Ccdc3Q9D6Y1 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.25□□□□□ -2.21
Ccdc3Q9D6Y1 Gm14624-201ENSMUST00000117746 192 ntBASIC1.25□□□□□ -2.21
Ccdc3Q9D6Y1 Gm15659-201ENSMUST00000118881 341 ntBASIC1.25□□□□□ -2.21
Ccdc3Q9D6Y1 Gm14785-201ENSMUST00000120185 539 ntBASIC1.25□□□□□ -2.21
Ccdc3Q9D6Y1 Gm23184-201ENSMUST00000122594 131 ntBASIC1.25□□□□□ -2.21
Ccdc3Q9D6Y1 Gm22731-201ENSMUST00000158086 94 ntBASIC1.25□□□□□ -2.21
Ccdc3Q9D6Y1 Gm26173-201ENSMUST00000158416 136 ntBASIC1.25□□□□□ -2.21
Ccdc3Q9D6Y1 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC1.25□□□□□ -2.21
Ccdc3Q9D6Y1 Gm18396-201ENSMUST00000177095 361 ntBASIC1.25□□□□□ -2.21
Ccdc3Q9D6Y1 Gm23619-201ENSMUST00000178411 94 ntBASIC1.25□□□□□ -2.21
Ccdc3Q9D6Y1 Gm25670-201ENSMUST00000178423 107 ntBASIC1.25□□□□□ -2.21
Ccdc3Q9D6Y1 Gm26239-201ENSMUST00000178842 107 ntBASIC1.25□□□□□ -2.21
Ccdc3Q9D6Y1 Gm25474-201ENSMUST00000179052 94 ntBASIC1.25□□□□□ -2.21
Ccdc3Q9D6Y1 Gm22047-201ENSMUST00000179176 94 ntBASIC1.25□□□□□ -2.21
Ccdc3Q9D6Y1 Gm21894-201ENSMUST00000179631 546 ntBASIC1.25□□□□□ -2.21
Ccdc3Q9D6Y1 Mir7683-201ENSMUST00000183842 61 ntBASIC1.25□□□□□ -2.21
Ccdc3Q9D6Y1 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Ccdc3Q9D6Y1 Gm44482-201ENSMUST00000199232 103 ntBASIC1.25□□□□□ -2.21
Ccdc3Q9D6Y1 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
Ccdc3Q9D6Y1 AC157654.1-201ENSMUST00000224130 820 ntBASIC1.25□□□□□ -2.21
Ccdc3Q9D6Y1 AC120553.1-201ENSMUST00000227313 260 ntBASIC1.25□□□□□ -2.21
Ccdc3Q9D6Y1 Gm24292-201ENSMUST00000082888 107 ntBASIC1.25□□□□□ -2.21
Ccdc3Q9D6Y1 Gm24045-201ENSMUST00000083113 98 ntBASIC1.25□□□□□ -2.21
Ccdc3Q9D6Y1 Gm8858-201ENSMUST00000118259 342 ntBASIC1.24□□□□□ -2.21
Ccdc3Q9D6Y1 Gm13059-201ENSMUST00000119881 398 ntBASIC1.24□□□□□ -2.21
Ccdc3Q9D6Y1 Gm14638-201ENSMUST00000121338 216 ntBASIC1.24□□□□□ -2.21
Ccdc3Q9D6Y1 Gm24910-201ENSMUST00000157289 272 ntBASIC1.24□□□□□ -2.21
Ccdc3Q9D6Y1 Gm26029-201ENSMUST00000158659 132 ntBASIC1.24□□□□□ -2.21
Ccdc3Q9D6Y1 Gm20477-201ENSMUST00000174028 280 ntBASIC1.24□□□□□ -2.21
Ccdc3Q9D6Y1 Gm24863-201ENSMUST00000179499 107 ntBASIC1.24□□□□□ -2.21
Ccdc3Q9D6Y1 Gm27659-201ENSMUST00000183472 98 ntBASIC1.24□□□□□ -2.21
Ccdc3Q9D6Y1 Gm27656-201ENSMUST00000185055 80 ntBASIC1.24□□□□□ -2.21
Ccdc3Q9D6Y1 Gm44483-201ENSMUST00000197203 97 ntBASIC1.24□□□□□ -2.21
Ccdc3Q9D6Y1 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.24□□□□□ -2.21
Ccdc3Q9D6Y1 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.24□□□□□ -2.21
Ccdc3Q9D6Y1 Gm22831-201ENSMUST00000102473 109 ntBASIC1.23□□□□□ -2.21
Ccdc3Q9D6Y1 Mir190b-201ENSMUST00000104803 80 ntBASIC1.23□□□□□ -2.21
Ccdc3Q9D6Y1 Gm24517-201ENSMUST00000122560 107 ntBASIC1.23□□□□□ -2.21
Ccdc3Q9D6Y1 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Ccdc3Q9D6Y1 Gm25069-201ENSMUST00000175238 86 ntBASIC1.23□□□□□ -2.21
Ccdc3Q9D6Y1 Mir1954-201ENSMUST00000175595 86 ntBASIC1.23□□□□□ -2.21
Ccdc3Q9D6Y1 Gm25936-201ENSMUST00000179952 114 ntBASIC1.23□□□□□ -2.21
Ccdc3Q9D6Y1 Mir7063-201ENSMUST00000184158 91 ntBASIC1.23□□□□□ -2.21
Ccdc3Q9D6Y1 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.23□□□□□ -2.21
Ccdc3Q9D6Y1 Gm38333-201ENSMUST00000193608 604 ntBASIC1.23□□□□□ -2.21
Ccdc3Q9D6Y1 Gm43810-201ENSMUST00000201018 232 ntBASIC1.23□□□□□ -2.21
Ccdc3Q9D6Y1 Gm2829-201ENSMUST00000213121 499 ntBASIC1.23□□□□□ -2.21
Ccdc3Q9D6Y1 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC1.23□□□□□ -2.21
Ccdc3Q9D6Y1 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.23□□□□□ -2.21
Ccdc3Q9D6Y1 AC102352.1-201ENSMUST00000224187 582 ntBASIC1.23□□□□□ -2.21
Ccdc3Q9D6Y1 Gm25404-201ENSMUST00000082970 107 ntBASIC1.23□□□□□ -2.21
Ccdc3Q9D6Y1 Gm23462-201ENSMUST00000083264 104 ntBASIC1.23□□□□□ -2.21
Ccdc3Q9D6Y1 Gm24252-201ENSMUST00000083700 132 ntBASIC1.23□□□□□ -2.21
Ccdc3Q9D6Y1 Gm38388-201ENSMUST00000195569 1430 ntBASIC1.23□□□□□ -2.21
Ccdc3Q9D6Y1 Gm12102-201ENSMUST00000118251 604 ntBASIC1.22□□□□□ -2.21
Ccdc3Q9D6Y1 Gm11857-201ENSMUST00000119817 324 ntBASIC1.22□□□□□ -2.21
Ccdc3Q9D6Y1 Gm7916-201ENSMUST00000120325 456 ntBASIC1.22□□□□□ -2.21
Ccdc3Q9D6Y1 Gm24598-201ENSMUST00000122510 74 ntBASIC1.22□□□□□ -2.21
Ccdc3Q9D6Y1 Gm23317-201ENSMUST00000157999 129 ntBASIC1.22□□□□□ -2.21
Ccdc3Q9D6Y1 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.22□□□□□ -2.21
Ccdc3Q9D6Y1 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.22□□□□□ -2.21
Ccdc3Q9D6Y1 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
Ccdc3Q9D6Y1 Mir6355-201ENSMUST00000183687 106 ntBASIC1.22□□□□□ -2.21
Ccdc3Q9D6Y1 CT010506.2-201ENSMUST00000225618 183 ntBASIC1.22□□□□□ -2.21
Ccdc3Q9D6Y1 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.22□□□□□ -2.21
Ccdc3Q9D6Y1 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.21□□□□□ -2.22
Ccdc3Q9D6Y1 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Ccdc3Q9D6Y1 Mir653-201ENSMUST00000102402 85 ntBASIC1.21□□□□□ -2.22
Ccdc3Q9D6Y1 n-R5s202-201ENSMUST00000104517 114 ntBASIC1.21□□□□□ -2.22
Ccdc3Q9D6Y1 Gm6025-201ENSMUST00000121517 201 ntBASIC1.21□□□□□ -2.22
Ccdc3Q9D6Y1 Gm15365-201ENSMUST00000122392 300 ntBASIC1.21□□□□□ -2.22
Ccdc3Q9D6Y1 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.21□□□□□ -2.22
Ccdc3Q9D6Y1 Gm6956-201ENSMUST00000134724 546 ntBASIC1.21□□□□□ -2.22
Ccdc3Q9D6Y1 Gm24551-201ENSMUST00000158645 92 ntBASIC1.21□□□□□ -2.22
Ccdc3Q9D6Y1 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Ccdc3Q9D6Y1 Gm17990-201ENSMUST00000211728 553 ntBASIC1.21□□□□□ -2.22
Ccdc3Q9D6Y1 Gm2628-201ENSMUST00000218019 426 ntBASIC1.21□□□□□ -2.22
Ccdc3Q9D6Y1 Gm18188-201ENSMUST00000219386 478 ntBASIC1.21□□□□□ -2.22
Ccdc3Q9D6Y1 AC159203.2-201ENSMUST00000221326 193 ntBASIC1.21□□□□□ -2.22
Ccdc3Q9D6Y1 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
Ccdc3Q9D6Y1 Mir211-201ENSMUST00000083651 106 ntBASIC1.21□□□□□ -2.22
Ccdc3Q9D6Y1 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC1.21□□□□□ -2.22
Ccdc3Q9D6Y1 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Ccdc3Q9D6Y1 Gm23422-201ENSMUST00000102000 107 ntBASIC1.2□□□□□ -2.22
Ccdc3Q9D6Y1 Gm24865-201ENSMUST00000103246 96 ntBASIC1.2□□□□□ -2.22
Ccdc3Q9D6Y1 Gm25759-201ENSMUST00000103988 129 ntBASIC1.2□□□□□ -2.22
Ccdc3Q9D6Y1 Gm24079-201ENSMUST00000104352 132 ntBASIC1.2□□□□□ -2.22
Ccdc3Q9D6Y1 Snord71-201ENSMUST00000104361 85 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 109.4 ms