Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.39□□□□□ -2.03
Vps28Q9D1C8 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Vps28Q9D1C8 Gm14670-201ENSMUST00000117327 337 ntBASIC2.39□□□□□ -2.03
Vps28Q9D1C8 Gm14748-201ENSMUST00000119819 411 ntBASIC2.39□□□□□ -2.03
Vps28Q9D1C8 Gm14848-201ENSMUST00000121850 467 ntBASIC2.39□□□□□ -2.03
Vps28Q9D1C8 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Vps28Q9D1C8 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC2.39□□□□□ -2.03
Vps28Q9D1C8 Gm25827-201ENSMUST00000157089 107 ntBASIC2.39□□□□□ -2.03
Vps28Q9D1C8 Gm22791-201ENSMUST00000157232 145 ntBASIC2.39□□□□□ -2.03
Vps28Q9D1C8 Gm25909-201ENSMUST00000157619 121 ntBASIC2.39□□□□□ -2.03
Vps28Q9D1C8 Gm24853-201ENSMUST00000158026 121 ntBASIC2.39□□□□□ -2.03
Vps28Q9D1C8 Gm7592-201ENSMUST00000160674 627 ntBASIC2.39□□□□□ -2.03
Vps28Q9D1C8 Gm24573-201ENSMUST00000175499 112 ntBASIC2.39□□□□□ -2.03
Vps28Q9D1C8 Mir6346-201ENSMUST00000183982 81 ntBASIC2.39□□□□□ -2.03
Vps28Q9D1C8 Trbv7-201ENSMUST00000193339 402 ntBASIC2.39□□□□□ -2.03
Vps28Q9D1C8 Gm37399-201ENSMUST00000195224 416 ntBASIC2.39□□□□□ -2.03
Vps28Q9D1C8 Mir6925-201ENSMUST00000197857 70 ntBASIC2.39□□□□□ -2.03
Vps28Q9D1C8 Gm43431-201ENSMUST00000198577 340 ntBASIC2.39□□□□□ -2.03
Vps28Q9D1C8 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC2.39□□□□□ -2.03
Vps28Q9D1C8 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.39□□□□□ -2.03
Vps28Q9D1C8 Gm26126-201ENSMUST00000083188 164 ntBASIC2.39□□□□□ -2.03
Vps28Q9D1C8 Gm26164-201ENSMUST00000083793 104 ntBASIC2.39□□□□□ -2.03
Vps28Q9D1C8 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.39□□□□□ -2.03
Vps28Q9D1C8 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.39□□□□□ -2.03
Vps28Q9D1C8 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Vps28Q9D1C8 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Vps28Q9D1C8 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.38□□□□□ -2.03
Vps28Q9D1C8 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.38□□□□□ -2.03
Vps28Q9D1C8 Gm23642-201ENSMUST00000157858 258 ntBASIC2.38□□□□□ -2.03
Vps28Q9D1C8 Gm24857-201ENSMUST00000158061 310 ntBASIC2.38□□□□□ -2.03
Vps28Q9D1C8 Gm24358-201ENSMUST00000158424 288 ntBASIC2.38□□□□□ -2.03
Vps28Q9D1C8 Gm7953-201ENSMUST00000168278 469 ntBASIC2.38□□□□□ -2.03
Vps28Q9D1C8 Mir28b-201ENSMUST00000175399 80 ntBASIC2.38□□□□□ -2.03
Vps28Q9D1C8 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
Vps28Q9D1C8 Gm43238-201ENSMUST00000196463 359 ntBASIC2.38□□□□□ -2.03
Vps28Q9D1C8 Gm42807-201ENSMUST00000200141 329 ntBASIC2.38□□□□□ -2.03
Vps28Q9D1C8 Gm44256-201ENSMUST00000203304 335 ntBASIC2.38□□□□□ -2.03
Vps28Q9D1C8 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.38□□□□□ -2.03
Vps28Q9D1C8 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Vps28Q9D1C8 AC147240.1-201ENSMUST00000218767 431 ntBASIC2.38□□□□□ -2.03
Vps28Q9D1C8 AC133156.1-202ENSMUST00000227284 363 ntBASIC2.38□□□□□ -2.03
Vps28Q9D1C8 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Vps28Q9D1C8 n-R5s94-201ENSMUST00000082573 119 ntBASIC2.38□□□□□ -2.03
Vps28Q9D1C8 Gm23721-201ENSMUST00000083005 107 ntBASIC2.38□□□□□ -2.03
Vps28Q9D1C8 Gm26314-201ENSMUST00000083891 107 ntBASIC2.38□□□□□ -2.03
Vps28Q9D1C8 Gm37598-201ENSMUST00000194506 1301 ntBASIC2.38□□□□□ -2.03
Vps28Q9D1C8 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.37□□□□□ -2.03
Vps28Q9D1C8 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Vps28Q9D1C8 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC2.37□□□□□ -2.03
Vps28Q9D1C8 Mir3103-201ENSMUST00000175474 67 ntBASIC2.37□□□□□ -2.03
Vps28Q9D1C8 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Vps28Q9D1C8 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC2.37□□□□□ -2.03
Vps28Q9D1C8 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC2.37□□□□□ -2.03
Vps28Q9D1C8 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC2.37□□□□□ -2.03
Vps28Q9D1C8 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC2.37□□□□□ -2.03
Vps28Q9D1C8 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC2.37□□□□□ -2.03
Vps28Q9D1C8 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC2.37□□□□□ -2.03
Vps28Q9D1C8 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC2.37□□□□□ -2.03
Vps28Q9D1C8 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC2.37□□□□□ -2.03
Vps28Q9D1C8 Gm37162-201ENSMUST00000191708 551 ntBASIC2.37□□□□□ -2.03
Vps28Q9D1C8 Gm2719-201ENSMUST00000191929 444 ntBASIC2.37□□□□□ -2.03
Vps28Q9D1C8 Trav15n-3-201ENSMUST00000200498 168 ntBASIC2.37□□□□□ -2.03
Vps28Q9D1C8 Gm45013-201ENSMUST00000206883 178 ntBASIC2.37□□□□□ -2.03
Vps28Q9D1C8 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.37□□□□□ -2.03
Vps28Q9D1C8 Gm44666-201ENSMUST00000208544 391 ntBASIC2.37□□□□□ -2.03
Vps28Q9D1C8 Gm45445-201ENSMUST00000209586 232 ntBASIC2.37□□□□□ -2.03
Vps28Q9D1C8 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.37□□□□□ -2.03
Vps28Q9D1C8 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Vps28Q9D1C8 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Vps28Q9D1C8 Gm37096-201ENSMUST00000192317 2058 ntBASIC2.37□□□□□ -2.03
Vps28Q9D1C8 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.36□□□□□ -2.03
Vps28Q9D1C8 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
Vps28Q9D1C8 Gm13439-201ENSMUST00000117541 409 ntBASIC2.36□□□□□ -2.03
Vps28Q9D1C8 Gm14652-201ENSMUST00000118479 235 ntBASIC2.36□□□□□ -2.03
Vps28Q9D1C8 Gm13396-201ENSMUST00000120617 271 ntBASIC2.36□□□□□ -2.03
Vps28Q9D1C8 Gm23324-201ENSMUST00000157421 131 ntBASIC2.36□□□□□ -2.03
Vps28Q9D1C8 Gm24726-201ENSMUST00000158232 121 ntBASIC2.36□□□□□ -2.03
Vps28Q9D1C8 Gm21827-201ENSMUST00000178247 423 ntBASIC2.36□□□□□ -2.03
Vps28Q9D1C8 Gm43676-201ENSMUST00000197532 540 ntBASIC2.36□□□□□ -2.03
Vps28Q9D1C8 Mir7232-201ENSMUST00000197929 74 ntBASIC2.36□□□□□ -2.03
Vps28Q9D1C8 Gm44429-201ENSMUST00000203542 186 ntBASIC2.36□□□□□ -2.03
Vps28Q9D1C8 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.36□□□□□ -2.03
Vps28Q9D1C8 Gm7214-201ENSMUST00000222428 272 ntBASIC2.36□□□□□ -2.03
Vps28Q9D1C8 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.36□□□□□ -2.03
Vps28Q9D1C8 AC166830.2-201ENSMUST00000225821 196 ntBASIC2.36□□□□□ -2.03
Vps28Q9D1C8 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.36□□□□□ -2.03
Vps28Q9D1C8 Gm25589-201ENSMUST00000082502 166 ntBASIC2.36□□□□□ -2.03
Vps28Q9D1C8 Mir93-201ENSMUST00000083593 88 ntBASIC2.36□□□□□ -2.03
Vps28Q9D1C8 Mir29c-201ENSMUST00000083614 88 ntBASIC2.36□□□□□ -2.03
Vps28Q9D1C8 Gm23041-201ENSMUST00000083868 106 ntBASIC2.36□□□□□ -2.03
Vps28Q9D1C8 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Vps28Q9D1C8 Gm26154-201ENSMUST00000102339 96 ntBASIC2.35□□□□□ -2.03
Vps28Q9D1C8 Mir466f-2-201ENSMUST00000104805 94 ntBASIC2.35□□□□□ -2.03
Vps28Q9D1C8 Gm14296-202ENSMUST00000108931 750 ntBASIC2.35□□□□□ -2.03
Vps28Q9D1C8 Gm24480-201ENSMUST00000157442 103 ntBASIC2.35□□□□□ -2.03
Vps28Q9D1C8 Gm24837-201ENSMUST00000158683 81 ntBASIC2.35□□□□□ -2.03
Vps28Q9D1C8 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC2.35□□□□□ -2.03
Vps28Q9D1C8 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Vps28Q9D1C8 Gm20462-201ENSMUST00000172623 408 ntBASIC2.35□□□□□ -2.03
Vps28Q9D1C8 Mir7068-201ENSMUST00000183439 74 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 101.5 ms