Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm22622-201ENSMUST00000082870 129 ntBASIC2.28□□□□□ -2.04
Ddx28Q9CWT6 Gm23462-201ENSMUST00000083264 104 ntBASIC2.28□□□□□ -2.04
Ddx28Q9CWT6 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.28□□□□□ -2.04
Ddx28Q9CWT6 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Ddx28Q9CWT6 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Ddx28Q9CWT6 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.27□□□□□ -2.05
Ddx28Q9CWT6 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.27□□□□□ -2.05
Ddx28Q9CWT6 Mir466k-201ENSMUST00000116774 122 ntBASIC2.27□□□□□ -2.05
Ddx28Q9CWT6 Gm25808-201ENSMUST00000122784 284 ntBASIC2.27□□□□□ -2.05
Ddx28Q9CWT6 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.27□□□□□ -2.05
Ddx28Q9CWT6 Gm23642-201ENSMUST00000157858 258 ntBASIC2.27□□□□□ -2.05
Ddx28Q9CWT6 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.27□□□□□ -2.05
Ddx28Q9CWT6 Mir3076-201ENSMUST00000175415 60 ntBASIC2.27□□□□□ -2.05
Ddx28Q9CWT6 Mir7013-201ENSMUST00000183540 72 ntBASIC2.27□□□□□ -2.05
Ddx28Q9CWT6 Gm28169-201ENSMUST00000190342 345 ntBASIC2.27□□□□□ -2.05
Ddx28Q9CWT6 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Ddx28Q9CWT6 Gm44468-201ENSMUST00000199516 105 ntBASIC2.27□□□□□ -2.05
Ddx28Q9CWT6 AC166341.3-201ENSMUST00000221861 114 ntBASIC2.27□□□□□ -2.05
Ddx28Q9CWT6 AC130829.3-201ENSMUST00000222735 154 ntBASIC2.27□□□□□ -2.05
Ddx28Q9CWT6 AL590614.1-201ENSMUST00000226037 268 ntBASIC2.27□□□□□ -2.05
Ddx28Q9CWT6 AC133156.1-202ENSMUST00000227284 363 ntBASIC2.27□□□□□ -2.05
Ddx28Q9CWT6 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
Ddx28Q9CWT6 Snord68-201ENSMUST00000082516 86 ntBASIC2.27□□□□□ -2.05
Ddx28Q9CWT6 Gm23412-201ENSMUST00000083017 107 ntBASIC2.27□□□□□ -2.05
Ddx28Q9CWT6 Gm26314-201ENSMUST00000083891 107 ntBASIC2.27□□□□□ -2.05
Ddx28Q9CWT6 Gm25937-201ENSMUST00000083912 107 ntBASIC2.27□□□□□ -2.05
Ddx28Q9CWT6 Gm26111-201ENSMUST00000083969 106 ntBASIC2.27□□□□□ -2.05
Ddx28Q9CWT6 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Ddx28Q9CWT6 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
Ddx28Q9CWT6 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.27□□□□□ -2.05
Ddx28Q9CWT6 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.26□□□□□ -2.05
Ddx28Q9CWT6 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Ddx28Q9CWT6 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Ddx28Q9CWT6 Mir682-201ENSMUST00000102281 96 ntBASIC2.26□□□□□ -2.05
Ddx28Q9CWT6 Gm26154-201ENSMUST00000102339 96 ntBASIC2.26□□□□□ -2.05
Ddx28Q9CWT6 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.26□□□□□ -2.05
Ddx28Q9CWT6 Gm14678-201ENSMUST00000121396 482 ntBASIC2.26□□□□□ -2.05
Ddx28Q9CWT6 Gm23589-201ENSMUST00000157660 105 ntBASIC2.26□□□□□ -2.05
Ddx28Q9CWT6 Gm23779-201ENSMUST00000157938 64 ntBASIC2.26□□□□□ -2.05
Ddx28Q9CWT6 Gm24726-201ENSMUST00000158232 121 ntBASIC2.26□□□□□ -2.05
Ddx28Q9CWT6 Gm25956-201ENSMUST00000175115 217 ntBASIC2.26□□□□□ -2.05
Ddx28Q9CWT6 Gm21978-201ENSMUST00000179696 377 ntBASIC2.26□□□□□ -2.05
Ddx28Q9CWT6 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.26□□□□□ -2.05
Ddx28Q9CWT6 Gm28288-201ENSMUST00000191019 214 ntBASIC2.26□□□□□ -2.05
Ddx28Q9CWT6 Ighv1-46-201ENSMUST00000193988 351 ntBASIC2.26□□□□□ -2.05
Ddx28Q9CWT6 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.26□□□□□ -2.05
Ddx28Q9CWT6 Gm44063-201ENSMUST00000203307 376 ntBASIC2.26□□□□□ -2.05
Ddx28Q9CWT6 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC2.26□□□□□ -2.05
Ddx28Q9CWT6 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.26□□□□□ -2.05
Ddx28Q9CWT6 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Ddx28Q9CWT6 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.26□□□□□ -2.05
Ddx28Q9CWT6 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Ddx28Q9CWT6 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Ddx28Q9CWT6 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Ddx28Q9CWT6 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
Ddx28Q9CWT6 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
Ddx28Q9CWT6 Gm13581-201ENSMUST00000120675 278 ntBASIC2.25□□□□□ -2.05
Ddx28Q9CWT6 Gm24892-201ENSMUST00000122747 104 ntBASIC2.25□□□□□ -2.05
Ddx28Q9CWT6 Gm22598-201ENSMUST00000157600 127 ntBASIC2.25□□□□□ -2.05
Ddx28Q9CWT6 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Ddx28Q9CWT6 Gm44960-201ENSMUST00000207403 141 ntBASIC2.25□□□□□ -2.05
Ddx28Q9CWT6 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.25□□□□□ -2.05
Ddx28Q9CWT6 AC122905.2-201ENSMUST00000220325 269 ntBASIC2.25□□□□□ -2.05
Ddx28Q9CWT6 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.25□□□□□ -2.05
Ddx28Q9CWT6 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Ddx28Q9CWT6 Gm26265-201ENSMUST00000083277 135 ntBASIC2.25□□□□□ -2.05
Ddx28Q9CWT6 Gm23246-201ENSMUST00000083371 67 ntBASIC2.25□□□□□ -2.05
Ddx28Q9CWT6 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Ddx28Q9CWT6 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
Ddx28Q9CWT6 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Ddx28Q9CWT6 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Ddx28Q9CWT6 Mir669i-201ENSMUST00000117007 127 ntBASIC2.24□□□□□ -2.05
Ddx28Q9CWT6 Gm16362-201ENSMUST00000135189 214 ntBASIC2.24□□□□□ -2.05
Ddx28Q9CWT6 Gm16358-201ENSMUST00000146046 210 ntBASIC2.24□□□□□ -2.05
Ddx28Q9CWT6 Gm22316-201ENSMUST00000158012 216 ntBASIC2.24□□□□□ -2.05
Ddx28Q9CWT6 Gm22434-201ENSMUST00000158549 122 ntBASIC2.24□□□□□ -2.05
Ddx28Q9CWT6 Gm24388-201ENSMUST00000177872 107 ntBASIC2.24□□□□□ -2.05
Ddx28Q9CWT6 Gm24487-201ENSMUST00000178017 63 ntBASIC2.24□□□□□ -2.05
Ddx28Q9CWT6 Gm25457-201ENSMUST00000179509 107 ntBASIC2.24□□□□□ -2.05
Ddx28Q9CWT6 Gm27640-201ENSMUST00000184580 147 ntBASIC2.24□□□□□ -2.05
Ddx28Q9CWT6 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Ddx28Q9CWT6 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC2.24□□□□□ -2.05
Ddx28Q9CWT6 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC2.24□□□□□ -2.05
Ddx28Q9CWT6 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.24□□□□□ -2.05
Ddx28Q9CWT6 Gm19118-201ENSMUST00000222554 98 ntBASIC2.24□□□□□ -2.05
Ddx28Q9CWT6 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Ddx28Q9CWT6 Gm26494-201ENSMUST00000083154 143 ntBASIC2.24□□□□□ -2.05
Ddx28Q9CWT6 Gm24493-201ENSMUST00000083805 143 ntBASIC2.24□□□□□ -2.05
Ddx28Q9CWT6 Gm23345-201ENSMUST00000083817 150 ntBASIC2.24□□□□□ -2.05
Ddx28Q9CWT6 Gm25512-201ENSMUST00000083863 107 ntBASIC2.24□□□□□ -2.05
Ddx28Q9CWT6 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Ddx28Q9CWT6 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.24□□□□□ -2.05
Ddx28Q9CWT6 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.24□□□□□ -2.05
Ddx28Q9CWT6 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Ddx28Q9CWT6 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Ddx28Q9CWT6 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
Ddx28Q9CWT6 Gm11859-201ENSMUST00000118099 455 ntBASIC2.23□□□□□ -2.05
Ddx28Q9CWT6 Gm6574-201ENSMUST00000120037 362 ntBASIC2.23□□□□□ -2.05
Ddx28Q9CWT6 Gm14215-201ENSMUST00000120578 221 ntBASIC2.23□□□□□ -2.05
Ddx28Q9CWT6 Gm13862-201ENSMUST00000121220 197 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 104.8 ms