Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm21737-201ENSMUST00000178112 664 ntBASIC2.07□□□□□ -2.08
Ccdc43Q9CR29 Gm21729-201ENSMUST00000180058 664 ntBASIC2.07□□□□□ -2.08
Ccdc43Q9CR29 Gm21853-201ENSMUST00000180071 664 ntBASIC2.07□□□□□ -2.08
Ccdc43Q9CR29 Gm20901-201ENSMUST00000180177 664 ntBASIC2.07□□□□□ -2.08
Ccdc43Q9CR29 Mir7068-201ENSMUST00000183439 74 ntBASIC2.07□□□□□ -2.08
Ccdc43Q9CR29 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.07□□□□□ -2.08
Ccdc43Q9CR29 Gm29495-201ENSMUST00000189319 664 ntBASIC2.07□□□□□ -2.08
Ccdc43Q9CR29 Gm28090-201ENSMUST00000189458 664 ntBASIC2.07□□□□□ -2.08
Ccdc43Q9CR29 Gm21647-201ENSMUST00000189755 664 ntBASIC2.07□□□□□ -2.08
Ccdc43Q9CR29 Gm37550-201ENSMUST00000193230 463 ntBASIC2.07□□□□□ -2.08
Ccdc43Q9CR29 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Ccdc43Q9CR29 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC2.07□□□□□ -2.08
Ccdc43Q9CR29 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC2.07□□□□□ -2.08
Ccdc43Q9CR29 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC2.07□□□□□ -2.08
Ccdc43Q9CR29 AC144628.2-201ENSMUST00000227374 352 ntBASIC2.07□□□□□ -2.08
Ccdc43Q9CR29 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Ccdc43Q9CR29 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Ccdc43Q9CR29 Gm26457-201ENSMUST00000082678 78 ntBASIC2.07□□□□□ -2.08
Ccdc43Q9CR29 Gm23515-201ENSMUST00000082829 107 ntBASIC2.07□□□□□ -2.08
Ccdc43Q9CR29 AC163660.3-201ENSMUST00000224253 1563 ntBASIC2.06□□□□□ -2.08
Ccdc43Q9CR29 Gm37642-201ENSMUST00000193166 1735 ntBASIC2.06□□□□□ -2.08
Ccdc43Q9CR29 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC2.06□□□□□ -2.08
Ccdc43Q9CR29 Gm24282-201ENSMUST00000104232 66 ntBASIC2.06□□□□□ -2.08
Ccdc43Q9CR29 Gm12255-201ENSMUST00000117184 284 ntBASIC2.06□□□□□ -2.08
Ccdc43Q9CR29 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Ccdc43Q9CR29 Gm22768-201ENSMUST00000158366 153 ntBASIC2.06□□□□□ -2.08
Ccdc43Q9CR29 Gm25051-201ENSMUST00000158602 249 ntBASIC2.06□□□□□ -2.08
Ccdc43Q9CR29 Gm25707-201ENSMUST00000175120 96 ntBASIC2.06□□□□□ -2.08
Ccdc43Q9CR29 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC2.06□□□□□ -2.08
Ccdc43Q9CR29 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.06□□□□□ -2.08
Ccdc43Q9CR29 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Ccdc43Q9CR29 Gm5034-201ENSMUST00000199115 634 ntBASIC2.06□□□□□ -2.08
Ccdc43Q9CR29 Gm44256-201ENSMUST00000203304 335 ntBASIC2.06□□□□□ -2.08
Ccdc43Q9CR29 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC2.06□□□□□ -2.08
Ccdc43Q9CR29 Gm44533-201ENSMUST00000207782 268 ntBASIC2.06□□□□□ -2.08
Ccdc43Q9CR29 Gm45344-201ENSMUST00000211610 341 ntBASIC2.06□□□□□ -2.08
Ccdc43Q9CR29 AC147101.1-201ENSMUST00000217964 312 ntBASIC2.06□□□□□ -2.08
Ccdc43Q9CR29 AC132954.1-201ENSMUST00000221017 342 ntBASIC2.06□□□□□ -2.08
Ccdc43Q9CR29 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.06□□□□□ -2.08
Ccdc43Q9CR29 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Ccdc43Q9CR29 Gm24623-201ENSMUST00000082616 194 ntBASIC2.06□□□□□ -2.08
Ccdc43Q9CR29 Gm23097-201ENSMUST00000083448 105 ntBASIC2.06□□□□□ -2.08
Ccdc43Q9CR29 Mir429-201ENSMUST00000083493 83 ntBASIC2.06□□□□□ -2.08
Ccdc43Q9CR29 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Ccdc43Q9CR29 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Ccdc43Q9CR29 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Ccdc43Q9CR29 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
Ccdc43Q9CR29 Gm22217-201ENSMUST00000157556 313 ntBASIC2.05□□□□□ -2.08
Ccdc43Q9CR29 Gm23557-201ENSMUST00000157820 138 ntBASIC2.05□□□□□ -2.08
Ccdc43Q9CR29 Gm23548-201ENSMUST00000158963 106 ntBASIC2.05□□□□□ -2.08
Ccdc43Q9CR29 Snord87-201ENSMUST00000175437 87 ntBASIC2.05□□□□□ -2.08
Ccdc43Q9CR29 Gm18588-201ENSMUST00000177308 492 ntBASIC2.05□□□□□ -2.08
Ccdc43Q9CR29 Mir6901-201ENSMUST00000185062 62 ntBASIC2.05□□□□□ -2.08
Ccdc43Q9CR29 Gm28506-201ENSMUST00000189937 150 ntBASIC2.05□□□□□ -2.08
Ccdc43Q9CR29 Gm32175-201ENSMUST00000193641 346 ntBASIC2.05□□□□□ -2.08
Ccdc43Q9CR29 Gm34073-201ENSMUST00000195736 212 ntBASIC2.05□□□□□ -2.08
Ccdc43Q9CR29 Gm45315-201ENSMUST00000209283 333 ntBASIC2.05□□□□□ -2.08
Ccdc43Q9CR29 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.05□□□□□ -2.08
Ccdc43Q9CR29 Gm24150-201ENSMUST00000082759 104 ntBASIC2.05□□□□□ -2.08
Ccdc43Q9CR29 Gm10360-201ENSMUST00000097219 272 ntBASIC2.05□□□□□ -2.08
Ccdc43Q9CR29 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Ccdc43Q9CR29 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Ccdc43Q9CR29 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Ccdc43Q9CR29 Gm24984-201ENSMUST00000104454 133 ntBASIC2.04□□□□□ -2.08
Ccdc43Q9CR29 Gm23858-201ENSMUST00000158384 106 ntBASIC2.04□□□□□ -2.08
Ccdc43Q9CR29 Gm23181-201ENSMUST00000158685 110 ntBASIC2.04□□□□□ -2.08
Ccdc43Q9CR29 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Ccdc43Q9CR29 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC2.04□□□□□ -2.08
Ccdc43Q9CR29 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.04□□□□□ -2.08
Ccdc43Q9CR29 Gm44337-201ENSMUST00000196553 114 ntBASIC2.04□□□□□ -2.08
Ccdc43Q9CR29 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC2.04□□□□□ -2.08
Ccdc43Q9CR29 AC167192.2-201ENSMUST00000224794 198 ntBASIC2.04□□□□□ -2.08
Ccdc43Q9CR29 AC112972.1-201ENSMUST00000227329 365 ntBASIC2.04□□□□□ -2.08
Ccdc43Q9CR29 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.04□□□□□ -2.08
Ccdc43Q9CR29 Gm25896-201ENSMUST00000083713 136 ntBASIC2.04□□□□□ -2.08
Ccdc43Q9CR29 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
Ccdc43Q9CR29 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
Ccdc43Q9CR29 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
Ccdc43Q9CR29 Gm22713-201ENSMUST00000116895 130 ntBASIC2.03□□□□□ -2.08
Ccdc43Q9CR29 Gm12225-201ENSMUST00000117995 298 ntBASIC2.03□□□□□ -2.08
Ccdc43Q9CR29 Gm24409-201ENSMUST00000157881 152 ntBASIC2.03□□□□□ -2.08
Ccdc43Q9CR29 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC2.03□□□□□ -2.08
Ccdc43Q9CR29 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC2.03□□□□□ -2.08
Ccdc43Q9CR29 Gm9830-201ENSMUST00000178509 357 ntBASIC2.03□□□□□ -2.08
Ccdc43Q9CR29 Gm27313-201ENSMUST00000183500 142 ntBASIC2.03□□□□□ -2.08
Ccdc43Q9CR29 Mir7678-201ENSMUST00000185076 71 ntBASIC2.03□□□□□ -2.08
Ccdc43Q9CR29 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
Ccdc43Q9CR29 Gm18775-201ENSMUST00000190763 586 ntBASIC2.03□□□□□ -2.08
Ccdc43Q9CR29 Gm44181-201ENSMUST00000203106 483 ntBASIC2.03□□□□□ -2.08
Ccdc43Q9CR29 AC069074.1-201ENSMUST00000220048 381 ntBASIC2.03□□□□□ -2.08
Ccdc43Q9CR29 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC2.03□□□□□ -2.09
Ccdc43Q9CR29 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Ccdc43Q9CR29 Gm6806-201ENSMUST00000120092 1006 ntBASIC2.02□□□□□ -2.09
Ccdc43Q9CR29 Gm13433-201ENSMUST00000121701 240 ntBASIC2.02□□□□□ -2.09
Ccdc43Q9CR29 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Ccdc43Q9CR29 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC2.02□□□□□ -2.09
Ccdc43Q9CR29 Gm22316-201ENSMUST00000158012 216 ntBASIC2.02□□□□□ -2.09
Ccdc43Q9CR29 Gm24577-201ENSMUST00000158580 63 ntBASIC2.02□□□□□ -2.09
Ccdc43Q9CR29 Gm16162-201ENSMUST00000162296 297 ntBASIC2.02□□□□□ -2.09
Ccdc43Q9CR29 Mir3103-201ENSMUST00000175474 67 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms