Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
RTRAFQ9CQE8 Gm29657-201ENSMUST00000189807 342 ntBASIC1.25□□□□□ -2.21
RTRAFQ9CQE8 Gm28437-201ENSMUST00000190277 783 ntBASIC1.25□□□□□ -2.21
RTRAFQ9CQE8 Gm44181-201ENSMUST00000203106 483 ntBASIC1.25□□□□□ -2.21
RTRAFQ9CQE8 Gm45375-201ENSMUST00000210338 280 ntBASIC1.25□□□□□ -2.21
RTRAFQ9CQE8 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.25□□□□□ -2.21
RTRAFQ9CQE8 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.25□□□□□ -2.21
RTRAFQ9CQE8 Gm24805-201ENSMUST00000082931 104 ntBASIC1.25□□□□□ -2.21
RTRAFQ9CQE8 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.25□□□□□ -2.21
RTRAFQ9CQE8 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
RTRAFQ9CQE8 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
RTRAFQ9CQE8 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.24□□□□□ -2.21
RTRAFQ9CQE8 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC1.24□□□□□ -2.21
RTRAFQ9CQE8 Gm13457-201ENSMUST00000117885 267 ntBASIC1.24□□□□□ -2.21
RTRAFQ9CQE8 Gm13341-201ENSMUST00000120780 672 ntBASIC1.24□□□□□ -2.21
RTRAFQ9CQE8 Gm24896-201ENSMUST00000122741 135 ntBASIC1.24□□□□□ -2.21
RTRAFQ9CQE8 Gm24480-201ENSMUST00000157442 103 ntBASIC1.24□□□□□ -2.21
RTRAFQ9CQE8 Gm23589-201ENSMUST00000157660 105 ntBASIC1.24□□□□□ -2.21
RTRAFQ9CQE8 Gm23548-201ENSMUST00000158963 106 ntBASIC1.24□□□□□ -2.21
RTRAFQ9CQE8 Gm20613-201ENSMUST00000175828 345 ntBASIC1.24□□□□□ -2.21
RTRAFQ9CQE8 Mir6341-201ENSMUST00000183490 121 ntBASIC1.24□□□□□ -2.21
RTRAFQ9CQE8 Gm29352-201ENSMUST00000188054 544 ntBASIC1.24□□□□□ -2.21
RTRAFQ9CQE8 Gm37658-201ENSMUST00000192672 315 ntBASIC1.24□□□□□ -2.21
RTRAFQ9CQE8 Gm44446-201ENSMUST00000204864 255 ntBASIC1.24□□□□□ -2.21
RTRAFQ9CQE8 AL772265.1-201ENSMUST00000214379 305 ntBASIC1.24□□□□□ -2.21
RTRAFQ9CQE8 Gm18113-201ENSMUST00000220630 303 ntBASIC1.24□□□□□ -2.21
RTRAFQ9CQE8 Gm26457-201ENSMUST00000082678 78 ntBASIC1.24□□□□□ -2.21
RTRAFQ9CQE8 Gm24035-201ENSMUST00000082867 107 ntBASIC1.24□□□□□ -2.21
RTRAFQ9CQE8 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
RTRAFQ9CQE8 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.24□□□□□ -2.21
RTRAFQ9CQE8 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
RTRAFQ9CQE8 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
RTRAFQ9CQE8 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
RTRAFQ9CQE8 Gm24172-201ENSMUST00000104127 117 ntBASIC1.23□□□□□ -2.21
RTRAFQ9CQE8 Gm25541-201ENSMUST00000116888 126 ntBASIC1.23□□□□□ -2.21
RTRAFQ9CQE8 Gm24481-201ENSMUST00000157210 102 ntBASIC1.23□□□□□ -2.21
RTRAFQ9CQE8 Gm26393-201ENSMUST00000157625 129 ntBASIC1.23□□□□□ -2.21
RTRAFQ9CQE8 Gm23043-201ENSMUST00000157890 109 ntBASIC1.23□□□□□ -2.21
RTRAFQ9CQE8 Gm25224-201ENSMUST00000158195 68 ntBASIC1.23□□□□□ -2.21
RTRAFQ9CQE8 Gm21827-201ENSMUST00000178247 423 ntBASIC1.23□□□□□ -2.21
RTRAFQ9CQE8 Gm26501-201ENSMUST00000178307 107 ntBASIC1.23□□□□□ -2.21
RTRAFQ9CQE8 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
RTRAFQ9CQE8 Gm27957-201ENSMUST00000184054 127 ntBASIC1.23□□□□□ -2.21
RTRAFQ9CQE8 Gm8151-201ENSMUST00000184817 871 ntBASIC1.23□□□□□ -2.21
RTRAFQ9CQE8 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.23□□□□□ -2.21
RTRAFQ9CQE8 Gm37533-201ENSMUST00000193848 545 ntBASIC1.23□□□□□ -2.21
RTRAFQ9CQE8 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.23□□□□□ -2.21
RTRAFQ9CQE8 Gm45013-201ENSMUST00000206883 178 ntBASIC1.23□□□□□ -2.21
RTRAFQ9CQE8 Gm45116-201ENSMUST00000207392 275 ntBASIC1.23□□□□□ -2.21
RTRAFQ9CQE8 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.23□□□□□ -2.21
RTRAFQ9CQE8 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.23□□□□□ -2.21
RTRAFQ9CQE8 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
RTRAFQ9CQE8 Gm25589-201ENSMUST00000082502 166 ntBASIC1.23□□□□□ -2.21
RTRAFQ9CQE8 Gm26108-201ENSMUST00000083973 191 ntBASIC1.23□□□□□ -2.21
RTRAFQ9CQE8 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
RTRAFQ9CQE8 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
RTRAFQ9CQE8 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
RTRAFQ9CQE8 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
RTRAFQ9CQE8 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
RTRAFQ9CQE8 Gm26249-201ENSMUST00000116708 118 ntBASIC1.22□□□□□ -2.21
RTRAFQ9CQE8 Gm23551-201ENSMUST00000116852 121 ntBASIC1.22□□□□□ -2.21
RTRAFQ9CQE8 Gm11410-201ENSMUST00000120053 1143 ntBASIC1.22□□□□□ -2.21
RTRAFQ9CQE8 Gm22559-201ENSMUST00000157329 134 ntBASIC1.22□□□□□ -2.21
RTRAFQ9CQE8 Gm26149-201ENSMUST00000157432 108 ntBASIC1.22□□□□□ -2.21
RTRAFQ9CQE8 Gm24438-201ENSMUST00000157893 115 ntBASIC1.22□□□□□ -2.21
RTRAFQ9CQE8 Gm23411-201ENSMUST00000157988 62 ntBASIC1.22□□□□□ -2.21
RTRAFQ9CQE8 Gm24901-201ENSMUST00000158125 110 ntBASIC1.22□□□□□ -2.21
RTRAFQ9CQE8 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC1.22□□□□□ -2.21
RTRAFQ9CQE8 Gm22862-201ENSMUST00000178593 121 ntBASIC1.22□□□□□ -2.21
RTRAFQ9CQE8 Gm23379-201ENSMUST00000180026 107 ntBASIC1.22□□□□□ -2.21
RTRAFQ9CQE8 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
RTRAFQ9CQE8 Gm18357-201ENSMUST00000188184 580 ntBASIC1.22□□□□□ -2.21
RTRAFQ9CQE8 Gm34073-201ENSMUST00000195736 212 ntBASIC1.22□□□□□ -2.21
RTRAFQ9CQE8 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.22□□□□□ -2.21
RTRAFQ9CQE8 AC155839.1-201ENSMUST00000200105 147 ntBASIC1.22□□□□□ -2.21
RTRAFQ9CQE8 Gm43914-201ENSMUST00000203592 594 ntBASIC1.22□□□□□ -2.21
RTRAFQ9CQE8 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.22□□□□□ -2.21
RTRAFQ9CQE8 Gm40810-201ENSMUST00000219149 253 ntBASIC1.22□□□□□ -2.21
RTRAFQ9CQE8 Gm22299-201ENSMUST00000082663 136 ntBASIC1.22□□□□□ -2.21
RTRAFQ9CQE8 Mir340-201ENSMUST00000083483 98 ntBASIC1.22□□□□□ -2.21
RTRAFQ9CQE8 Gm25859-201ENSMUST00000083710 91 ntBASIC1.22□□□□□ -2.21
RTRAFQ9CQE8 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
RTRAFQ9CQE8 Gm42770-201ENSMUST00000199657 4155 ntBASIC1.21□□□□□ -2.22
RTRAFQ9CQE8 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
RTRAFQ9CQE8 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.21□□□□□ -2.22
RTRAFQ9CQE8 Gm22488-201ENSMUST00000116811 127 ntBASIC1.21□□□□□ -2.22
RTRAFQ9CQE8 Gm15536-201ENSMUST00000121411 114 ntBASIC1.21□□□□□ -2.22
RTRAFQ9CQE8 Gm22328-201ENSMUST00000158074 112 ntBASIC1.21□□□□□ -2.22
RTRAFQ9CQE8 Gm26214-201ENSMUST00000158581 107 ntBASIC1.21□□□□□ -2.22
RTRAFQ9CQE8 Gm24551-201ENSMUST00000158645 92 ntBASIC1.21□□□□□ -2.22
RTRAFQ9CQE8 Gm24174-201ENSMUST00000158933 111 ntBASIC1.21□□□□□ -2.22
RTRAFQ9CQE8 Gm23090-201ENSMUST00000177331 78 ntBASIC1.21□□□□□ -2.22
RTRAFQ9CQE8 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.21□□□□□ -2.22
RTRAFQ9CQE8 Gm43245-201ENSMUST00000197603 468 ntBASIC1.21□□□□□ -2.22
RTRAFQ9CQE8 AC162387.1-201ENSMUST00000213369 213 ntBASIC1.21□□□□□ -2.22
RTRAFQ9CQE8 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.21□□□□□ -2.22
RTRAFQ9CQE8 Gm45815-201ENSMUST00000220241 146 ntBASIC1.21□□□□□ -2.22
RTRAFQ9CQE8 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.21□□□□□ -2.22
RTRAFQ9CQE8 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.21□□□□□ -2.22
RTRAFQ9CQE8 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.21□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms