Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm23002-201ENSMUST00000179221 107 ntBASIC3.21□□□□□ -1.9
Trim8Q99PJ2 Gm29597-201ENSMUST00000188035 308 ntBASIC3.21□□□□□ -1.9
Trim8Q99PJ2 Gm37763-201ENSMUST00000193445 120 ntBASIC3.21□□□□□ -1.9
Trim8Q99PJ2 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.21□□□□□ -1.9
Trim8Q99PJ2 Gm6796-201ENSMUST00000211919 243 ntBASIC3.21□□□□□ -1.9
Trim8Q99PJ2 AC155715.1-201ENSMUST00000213575 463 ntBASIC3.21□□□□□ -1.9
Trim8Q99PJ2 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Trim8Q99PJ2 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.21□□□□□ -1.9
Trim8Q99PJ2 Gm22443-201ENSMUST00000082890 107 ntBASIC3.21□□□□□ -1.9
Trim8Q99PJ2 Gm25199-201ENSMUST00000083095 104 ntBASIC3.21□□□□□ -1.9
Trim8Q99PJ2 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Trim8Q99PJ2 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Trim8Q99PJ2 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Trim8Q99PJ2 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Trim8Q99PJ2 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Trim8Q99PJ2 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Trim8Q99PJ2 Gm24172-201ENSMUST00000104127 117 ntBASIC3.2□□□□□ -1.9
Trim8Q99PJ2 Gm25272-201ENSMUST00000104293 128 ntBASIC3.2□□□□□ -1.9
Trim8Q99PJ2 Gm24911-201ENSMUST00000157292 136 ntBASIC3.2□□□□□ -1.9
Trim8Q99PJ2 Gm23588-201ENSMUST00000157659 99 ntBASIC3.2□□□□□ -1.9
Trim8Q99PJ2 Gm22315-201ENSMUST00000158010 143 ntBASIC3.2□□□□□ -1.9
Trim8Q99PJ2 Gm24878-201ENSMUST00000158782 104 ntBASIC3.2□□□□□ -1.9
Trim8Q99PJ2 Gm26005-201ENSMUST00000158802 134 ntBASIC3.2□□□□□ -1.9
Trim8Q99PJ2 Gm26141-201ENSMUST00000175299 126 ntBASIC3.2□□□□□ -1.9
Trim8Q99PJ2 Gm22118-201ENSMUST00000175593 171 ntBASIC3.2□□□□□ -1.9
Trim8Q99PJ2 Ighv1-46-201ENSMUST00000193988 351 ntBASIC3.2□□□□□ -1.9
Trim8Q99PJ2 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC3.2□□□□□ -1.9
Trim8Q99PJ2 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC3.2□□□□□ -1.9
Trim8Q99PJ2 Gm45778-201ENSMUST00000211959 153 ntBASIC3.2□□□□□ -1.9
Trim8Q99PJ2 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC3.2□□□□□ -1.9
Trim8Q99PJ2 Mir32-201ENSMUST00000083610 70 ntBASIC3.2□□□□□ -1.9
Trim8Q99PJ2 Gm25896-201ENSMUST00000083713 136 ntBASIC3.2□□□□□ -1.9
Trim8Q99PJ2 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
Trim8Q99PJ2 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Trim8Q99PJ2 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.19□□□□□ -1.9
Trim8Q99PJ2 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trim8Q99PJ2 Gm24282-201ENSMUST00000104232 66 ntBASIC3.19□□□□□ -1.9
Trim8Q99PJ2 Snord19-201ENSMUST00000104609 76 ntBASIC3.19□□□□□ -1.9
Trim8Q99PJ2 Gm14803-201ENSMUST00000117163 361 ntBASIC3.19□□□□□ -1.9
Trim8Q99PJ2 Gm13581-201ENSMUST00000120675 278 ntBASIC3.19□□□□□ -1.9
Trim8Q99PJ2 Gm23640-201ENSMUST00000157860 104 ntBASIC3.19□□□□□ -1.9
Trim8Q99PJ2 Mir1934-201ENSMUST00000158127 83 ntBASIC3.19□□□□□ -1.9
Trim8Q99PJ2 Gm22450-201ENSMUST00000179641 107 ntBASIC3.19□□□□□ -1.9
Trim8Q99PJ2 Gm25024-201ENSMUST00000179667 104 ntBASIC3.19□□□□□ -1.9
Trim8Q99PJ2 Gm25473-201ENSMUST00000180191 107 ntBASIC3.19□□□□□ -1.9
Trim8Q99PJ2 Gm17966-201ENSMUST00000193453 594 ntBASIC3.19□□□□□ -1.9
Trim8Q99PJ2 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.19□□□□□ -1.9
Trim8Q99PJ2 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Trim8Q99PJ2 Gm32222-201ENSMUST00000203296 298 ntBASIC3.19□□□□□ -1.9
Trim8Q99PJ2 Gm36189-201ENSMUST00000204113 523 ntBASIC3.19□□□□□ -1.9
Trim8Q99PJ2 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC3.19□□□□□ -1.9
Trim8Q99PJ2 Gm18188-201ENSMUST00000219386 478 ntBASIC3.19□□□□□ -1.9
Trim8Q99PJ2 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.19□□□□□ -1.9
Trim8Q99PJ2 AC165106.2-201ENSMUST00000226749 97 ntBASIC3.19□□□□□ -1.9
Trim8Q99PJ2 Gm26071-201ENSMUST00000083261 107 ntBASIC3.19□□□□□ -1.9
Trim8Q99PJ2 Gm24521-201ENSMUST00000083958 107 ntBASIC3.19□□□□□ -1.9
Trim8Q99PJ2 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.19□□□□□ -1.9
Trim8Q99PJ2 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Trim8Q99PJ2 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Gm12025-201ENSMUST00000117768 144 ntBASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Gm13076-201ENSMUST00000118041 204 ntBASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Gm27592-201ENSMUST00000157729 126 ntBASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Gm25599-201ENSMUST00000157816 103 ntBASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Gm24601-201ENSMUST00000157970 143 ntBASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Gm24314-201ENSMUST00000158274 123 ntBASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Gm24006-201ENSMUST00000158462 132 ntBASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Gm22174-201ENSMUST00000175050 125 ntBASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Gm22692-201ENSMUST00000175055 125 ntBASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Gm27634-201ENSMUST00000175060 126 ntBASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Gm22460-201ENSMUST00000175269 124 ntBASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Gm25535-201ENSMUST00000175364 125 ntBASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Gm24365-201ENSMUST00000175384 125 ntBASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Gm44310-201ENSMUST00000175424 126 ntBASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Gm22639-201ENSMUST00000175591 125 ntBASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Gm20651-201ENSMUST00000177219 329 ntBASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Gm24979-201ENSMUST00000178626 126 ntBASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Gm23571-201ENSMUST00000180073 127 ntBASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Gm23190-201ENSMUST00000180307 64 ntBASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Gm28002-201ENSMUST00000184832 100 ntBASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Mir6540-201ENSMUST00000184886 108 ntBASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Gm27743-201ENSMUST00000185136 126 ntBASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Gm43427-201ENSMUST00000198188 331 ntBASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Igkv1-108-201ENSMUST00000198926 298 ntBASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Gm43680-201ENSMUST00000199466 340 ntBASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Gm15235-201ENSMUST00000200572 194 ntBASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Gm45080-201ENSMUST00000206648 283 ntBASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Gm5002-201ENSMUST00000207145 223 ntBASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Gm9174-201ENSMUST00000078149 255 ntBASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Gm18751-201ENSMUST00000185777 2013 ntBASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Gm36944-201ENSMUST00000192257 2759 ntBASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trim8Q99PJ2 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trim8Q99PJ2 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 188.1 ms