Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Gm23629-201ENSMUST00000082465 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm23924-201ENSMUST00000082474 108 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm22246-201ENSMUST00000082478 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm22749-201ENSMUST00000082490 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm22747-201ENSMUST00000082495 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm22063-201ENSMUST00000082560 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm23057-201ENSMUST00000082801 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm26331-201ENSMUST00000082824 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm23377-201ENSMUST00000082943 126 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm24205-201ENSMUST00000082953 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm25405-201ENSMUST00000082973 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm22628-201ENSMUST00000082988 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm26324-201ENSMUST00000083073 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm24535-201ENSMUST00000083140 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm26496-201ENSMUST00000083150 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm26127-201ENSMUST00000083193 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm24456-201ENSMUST00000083198 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm24458-201ENSMUST00000083204 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm24018-201ENSMUST00000083232 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm25790-201ENSMUST00000083293 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm22295-201ENSMUST00000083311 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm25127-201ENSMUST00000083336 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm25583-201ENSMUST00000083413 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm25577-201ENSMUST00000083414 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm24414-201ENSMUST00000083434 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm24861-201ENSMUST00000083459 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm24803-201ENSMUST00000083693 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm23103-201ENSMUST00000083725 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm22580-201ENSMUST00000083727 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm24260-201ENSMUST00000083741 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm23732-201ENSMUST00000083751 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm22682-201ENSMUST00000083854 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm25869-201ENSMUST00000083855 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm24693-201ENSMUST00000083885 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm26317-201ENSMUST00000083894 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm22352-201ENSMUST00000083917 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm24448-201ENSMUST00000083979 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm22798-201ENSMUST00000083992 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm26427-201ENSMUST00000093648 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm22886-201ENSMUST00000093714 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Gm22170-201ENSMUST00000097247 107 ntBASIC1.85□□□□□ -2.11
Sf3b1Q99NB9 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Sf3b1Q99NB9 Gm13672-201ENSMUST00000117554 459 ntBASIC1.84□□□□□ -2.12
Sf3b1Q99NB9 Gm23589-201ENSMUST00000157660 105 ntBASIC1.84□□□□□ -2.12
Sf3b1Q99NB9 Gm7592-201ENSMUST00000160674 627 ntBASIC1.84□□□□□ -2.12
Sf3b1Q99NB9 Gm24572-201ENSMUST00000175505 88 ntBASIC1.84□□□□□ -2.12
Sf3b1Q99NB9 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC1.84□□□□□ -2.12
Sf3b1Q99NB9 Gm27013-201ENSMUST00000182441 1024 ntBASIC1.84□□□□□ -2.12
Sf3b1Q99NB9 Gm28740-201ENSMUST00000186142 215 ntBASIC1.84□□□□□ -2.12
Sf3b1Q99NB9 Gm29134-201ENSMUST00000186579 126 ntBASIC1.84□□□□□ -2.12
Sf3b1Q99NB9 Gm28337-201ENSMUST00000190425 666 ntBASIC1.84□□□□□ -2.12
Sf3b1Q99NB9 Gm31123-201ENSMUST00000192094 666 ntBASIC1.84□□□□□ -2.12
Sf3b1Q99NB9 Gm37054-201ENSMUST00000193481 543 ntBASIC1.84□□□□□ -2.12
Sf3b1Q99NB9 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Sf3b1Q99NB9 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
Sf3b1Q99NB9 Gm43676-201ENSMUST00000197532 540 ntBASIC1.84□□□□□ -2.12
Sf3b1Q99NB9 Gm43431-201ENSMUST00000198577 340 ntBASIC1.84□□□□□ -2.12
Sf3b1Q99NB9 Snord43-201ENSMUST00000199549 108 ntBASIC1.84□□□□□ -2.12
Sf3b1Q99NB9 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
Sf3b1Q99NB9 Gm40810-201ENSMUST00000219149 253 ntBASIC1.84□□□□□ -2.12
Sf3b1Q99NB9 Mir148b-201ENSMUST00000083626 97 ntBASIC1.84□□□□□ -2.12
Sf3b1Q99NB9 Gm11935-201ENSMUST00000118608 399 ntBASIC1.83□□□□□ -2.12
Sf3b1Q99NB9 Gm26149-201ENSMUST00000157432 108 ntBASIC1.83□□□□□ -2.12
Sf3b1Q99NB9 Gm27722-201ENSMUST00000183908 76 ntBASIC1.83□□□□□ -2.12
Sf3b1Q99NB9 Mir195b-201ENSMUST00000184814 97 ntBASIC1.83□□□□□ -2.12
Sf3b1Q99NB9 Gm43914-201ENSMUST00000203592 594 ntBASIC1.83□□□□□ -2.12
Sf3b1Q99NB9 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC1.83□□□□□ -2.12
Sf3b1Q99NB9 Gm18696-201ENSMUST00000220103 274 ntBASIC1.83□□□□□ -2.12
Sf3b1Q99NB9 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Sf3b1Q99NB9 Mir107-201ENSMUST00000083660 87 ntBASIC1.83□□□□□ -2.12
Sf3b1Q99NB9 Gm26175-201ENSMUST00000083794 131 ntBASIC1.83□□□□□ -2.12
Sf3b1Q99NB9 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.83□□□□□ -2.12
Sf3b1Q99NB9 Gm22843-201ENSMUST00000157710 134 ntBASIC1.82□□□□□ -2.12
Sf3b1Q99NB9 Gm22665-201ENSMUST00000158720 275 ntBASIC1.82□□□□□ -2.12
Sf3b1Q99NB9 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.82□□□□□ -2.12
Sf3b1Q99NB9 AC130829.3-201ENSMUST00000222735 154 ntBASIC1.82□□□□□ -2.12
Sf3b1Q99NB9 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Sf3b1Q99NB9 Gm24165-201ENSMUST00000082718 128 ntBASIC1.82□□□□□ -2.12
Sf3b1Q99NB9 Gm24150-201ENSMUST00000082759 104 ntBASIC1.82□□□□□ -2.12
Sf3b1Q99NB9 Gm24412-201ENSMUST00000083426 109 ntBASIC1.82□□□□□ -2.12
Sf3b1Q99NB9 Snora33-201ENSMUST00000093556 129 ntBASIC1.82□□□□□ -2.12
Sf3b1Q99NB9 Gm25832-201ENSMUST00000104140 130 ntBASIC1.81□□□□□ -2.12
Sf3b1Q99NB9 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Sf3b1Q99NB9 Gm12225-201ENSMUST00000117995 298 ntBASIC1.81□□□□□ -2.12
Sf3b1Q99NB9 Gm15365-201ENSMUST00000122392 300 ntBASIC1.81□□□□□ -2.12
Sf3b1Q99NB9 Gm23411-201ENSMUST00000157988 62 ntBASIC1.81□□□□□ -2.12
Sf3b1Q99NB9 Gm27510-201ENSMUST00000158214 64 ntBASIC1.81□□□□□ -2.12
Sf3b1Q99NB9 Gm25956-201ENSMUST00000175115 217 ntBASIC1.81□□□□□ -2.12
Sf3b1Q99NB9 Gm43583-201ENSMUST00000199235 303 ntBASIC1.81□□□□□ -2.12
Sf3b1Q99NB9 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.81□□□□□ -2.12
Sf3b1Q99NB9 Gm23453-201ENSMUST00000083326 106 ntBASIC1.81□□□□□ -2.12
Sf3b1Q99NB9 Gm23097-201ENSMUST00000083448 105 ntBASIC1.81□□□□□ -2.12
Sf3b1Q99NB9 Mir151-201ENSMUST00000083678 68 ntBASIC1.81□□□□□ -2.12
Sf3b1Q99NB9 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.81□□□□□ -2.12
Sf3b1Q99NB9 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Sf3b1Q99NB9 Gm13153-201ENSMUST00000120969 637 ntBASIC1.8□□□□□ -2.12
Sf3b1Q99NB9 Gm25559-201ENSMUST00000157182 74 ntBASIC1.8□□□□□ -2.12
Sf3b1Q99NB9 Gm25994-201ENSMUST00000175392 101 ntBASIC1.8□□□□□ -2.12
Sf3b1Q99NB9 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC1.8□□□□□ -2.12
Sf3b1Q99NB9 Gm26335-201ENSMUST00000178449 107 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms