Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.17□□□□□ -1.9
Lims1Q99JW4 Gm44429-201ENSMUST00000203542 186 ntBASIC3.17□□□□□ -1.9
Lims1Q99JW4 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.17□□□□□ -1.9
Lims1Q99JW4 AC124739.2-201ENSMUST00000222201 109 ntBASIC3.17□□□□□ -1.9
Lims1Q99JW4 Gm23925-201ENSMUST00000082471 132 ntBASIC3.17□□□□□ -1.9
Lims1Q99JW4 Snora7a-201ENSMUST00000082629 140 ntBASIC3.17□□□□□ -1.9
Lims1Q99JW4 AF357341-201ENSMUST00000083088 75 ntBASIC3.17□□□□□ -1.9
Lims1Q99JW4 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.17□□□□□ -1.9
Lims1Q99JW4 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Lims1Q99JW4 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Lims1Q99JW4 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Lims1Q99JW4 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Lims1Q99JW4 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.16□□□□□ -1.9
Lims1Q99JW4 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Lims1Q99JW4 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.16□□□□□ -1.9
Lims1Q99JW4 Gm12897-201ENSMUST00000120341 250 ntBASIC3.16□□□□□ -1.9
Lims1Q99JW4 Gm24314-201ENSMUST00000158274 123 ntBASIC3.16□□□□□ -1.9
Lims1Q99JW4 Gm24053-201ENSMUST00000158620 105 ntBASIC3.16□□□□□ -1.9
Lims1Q99JW4 Gm16162-201ENSMUST00000162296 297 ntBASIC3.16□□□□□ -1.9
Lims1Q99JW4 Gm17067-202ENSMUST00000180131 123 ntBASIC3.16□□□□□ -1.9
Lims1Q99JW4 Mir21b-201ENSMUST00000184317 108 ntBASIC3.16□□□□□ -1.9
Lims1Q99JW4 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.16□□□□□ -1.9
Lims1Q99JW4 Gm6003-201ENSMUST00000187903 463 ntBASIC3.16□□□□□ -1.9
Lims1Q99JW4 Gm29167-201ENSMUST00000190024 377 ntBASIC3.16□□□□□ -1.9
Lims1Q99JW4 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Lims1Q99JW4 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.16□□□□□ -1.9
Lims1Q99JW4 CU062626.2-201ENSMUST00000223953 274 ntBASIC3.16□□□□□ -1.9
Lims1Q99JW4 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Lims1Q99JW4 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Lims1Q99JW4 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Lims1Q99JW4 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.15□□□□□ -1.9
Lims1Q99JW4 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.15□□□□□ -1.9
Lims1Q99JW4 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.15□□□□□ -1.9
Lims1Q99JW4 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Lims1Q99JW4 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
Lims1Q99JW4 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.15□□□□□ -1.91
Lims1Q99JW4 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
Lims1Q99JW4 Mir466b-3-201ENSMUST00000103806 81 ntBASIC3.15□□□□□ -1.91
Lims1Q99JW4 Gm25938-201ENSMUST00000104139 166 ntBASIC3.15□□□□□ -1.91
Lims1Q99JW4 Gm23175-201ENSMUST00000104371 132 ntBASIC3.15□□□□□ -1.91
Lims1Q99JW4 Gm12449-201ENSMUST00000117572 234 ntBASIC3.15□□□□□ -1.91
Lims1Q99JW4 Gm23183-201ENSMUST00000122595 323 ntBASIC3.15□□□□□ -1.91
Lims1Q99JW4 Gm23716-201ENSMUST00000157348 144 ntBASIC3.15□□□□□ -1.91
Lims1Q99JW4 Gm23391-201ENSMUST00000157579 104 ntBASIC3.15□□□□□ -1.91
Lims1Q99JW4 Gm22349-201ENSMUST00000157864 107 ntBASIC3.15□□□□□ -1.91
Lims1Q99JW4 Gm23044-201ENSMUST00000157891 100 ntBASIC3.15□□□□□ -1.91
Lims1Q99JW4 Gm27648-201ENSMUST00000184315 107 ntBASIC3.15□□□□□ -1.91
Lims1Q99JW4 Gm28650-201ENSMUST00000188413 411 ntBASIC3.15□□□□□ -1.91
Lims1Q99JW4 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.15□□□□□ -1.91
Lims1Q99JW4 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.15□□□□□ -1.91
Lims1Q99JW4 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.15□□□□□ -1.91
Lims1Q99JW4 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC3.15□□□□□ -1.91
Lims1Q99JW4 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.15□□□□□ -1.91
Lims1Q99JW4 Gm23736-201ENSMUST00000082553 75 ntBASIC3.15□□□□□ -1.91
Lims1Q99JW4 Gm25634-201ENSMUST00000082667 105 ntBASIC3.15□□□□□ -1.91
Lims1Q99JW4 Snord35b-201ENSMUST00000082833 87 ntBASIC3.15□□□□□ -1.91
Lims1Q99JW4 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.15□□□□□ -1.91
Lims1Q99JW4 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.15□□□□□ -1.91
Lims1Q99JW4 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.15□□□□□ -1.91
Lims1Q99JW4 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
Lims1Q99JW4 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Lims1Q99JW4 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Lims1Q99JW4 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Lims1Q99JW4 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Lims1Q99JW4 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Lims1Q99JW4 Gm11704-201ENSMUST00000120031 214 ntBASIC3.14□□□□□ -1.91
Lims1Q99JW4 Gm6762-201ENSMUST00000121769 289 ntBASIC3.14□□□□□ -1.91
Lims1Q99JW4 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.14□□□□□ -1.91
Lims1Q99JW4 Gm22476-201ENSMUST00000158902 100 ntBASIC3.14□□□□□ -1.91
Lims1Q99JW4 Gm29452-201ENSMUST00000187996 313 ntBASIC3.14□□□□□ -1.91
Lims1Q99JW4 Gm18433-202ENSMUST00000195682 196 ntBASIC3.14□□□□□ -1.91
Lims1Q99JW4 Gm18502-201ENSMUST00000218679 199 ntBASIC3.14□□□□□ -1.91
Lims1Q99JW4 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
Lims1Q99JW4 Gm24147-201ENSMUST00000082763 144 ntBASIC3.14□□□□□ -1.91
Lims1Q99JW4 Gm24355-201ENSMUST00000082858 122 ntBASIC3.14□□□□□ -1.91
Lims1Q99JW4 Gm25480-201ENSMUST00000083217 133 ntBASIC3.14□□□□□ -1.91
Lims1Q99JW4 Gm22970-201ENSMUST00000083304 186 ntBASIC3.14□□□□□ -1.91
Lims1Q99JW4 Gm24163-201ENSMUST00000093660 132 ntBASIC3.14□□□□□ -1.91
Lims1Q99JW4 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Lims1Q99JW4 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.14□□□□□ -1.91
Lims1Q99JW4 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.14□□□□□ -1.91
Lims1Q99JW4 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Lims1Q99JW4 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.14□□□□□ -1.91
Lims1Q99JW4 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.13□□□□□ -1.91
Lims1Q99JW4 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.13□□□□□ -1.91
Lims1Q99JW4 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Lims1Q99JW4 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Lims1Q99JW4 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Lims1Q99JW4 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.13□□□□□ -1.91
Lims1Q99JW4 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.13□□□□□ -1.91
Lims1Q99JW4 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
Lims1Q99JW4 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.13□□□□□ -1.91
Lims1Q99JW4 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Lims1Q99JW4 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.13□□□□□ -1.91
Lims1Q99JW4 Gm13167-201ENSMUST00000118554 578 ntBASIC3.13□□□□□ -1.91
Lims1Q99JW4 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.13□□□□□ -1.91
Lims1Q99JW4 Gm23865-201ENSMUST00000157723 97 ntBASIC3.13□□□□□ -1.91
Lims1Q99JW4 Gm17113-201ENSMUST00000170118 171 ntBASIC3.13□□□□□ -1.91
Lims1Q99JW4 Gm23053-201ENSMUST00000175136 96 ntBASIC3.13□□□□□ -1.91
Lims1Q99JW4 Gm28030-201ENSMUST00000184987 138 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms