Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
Cspg4Q8VHY0 Gm15861-201ENSMUST00000120979 339 ntBASIC0.21□□□□□ -2.38
Cspg4Q8VHY0 Gm24598-201ENSMUST00000122510 74 ntBASIC0.21□□□□□ -2.38
Cspg4Q8VHY0 Gm22226-201ENSMUST00000157355 109 ntBASIC0.21□□□□□ -2.38
Cspg4Q8VHY0 Gm22731-201ENSMUST00000158086 94 ntBASIC0.21□□□□□ -2.38
Cspg4Q8VHY0 Gm22668-201ENSMUST00000158716 260 ntBASIC0.21□□□□□ -2.38
Cspg4Q8VHY0 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
Cspg4Q8VHY0 Mir28b-201ENSMUST00000175399 80 ntBASIC0.21□□□□□ -2.38
Cspg4Q8VHY0 Gm42509-201ENSMUST00000197390 781 ntBASIC0.21□□□□□ -2.38
Cspg4Q8VHY0 Gm45965-201ENSMUST00000221192 1284 ntBASIC0.21□□□□□ -2.38
Cspg4Q8VHY0 Gm25851-201ENSMUST00000082794 107 ntBASIC0.21□□□□□ -2.38
Cspg4Q8VHY0 Gm25411-201ENSMUST00000083760 151 ntBASIC0.21□□□□□ -2.38
Cspg4Q8VHY0 Gm26074-201ENSMUST00000104063 129 ntBASIC0.21□□□□□ -2.38
Cspg4Q8VHY0 Gm12370-201ENSMUST00000117809 604 ntBASIC0.21□□□□□ -2.38
Cspg4Q8VHY0 Gm15214-201ENSMUST00000122155 470 ntBASIC0.21□□□□□ -2.38
Cspg4Q8VHY0 Gm14530-201ENSMUST00000122391 333 ntBASIC0.21□□□□□ -2.38
Cspg4Q8VHY0 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC0.21□□□□□ -2.38
Cspg4Q8VHY0 Gm25393-201ENSMUST00000157336 285 ntBASIC0.21□□□□□ -2.38
Cspg4Q8VHY0 Gm26152-201ENSMUST00000157427 101 ntBASIC0.21□□□□□ -2.38
Cspg4Q8VHY0 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC0.21□□□□□ -2.38
Cspg4Q8VHY0 Mir8106-201ENSMUST00000184520 139 ntBASIC0.21□□□□□ -2.38
Cspg4Q8VHY0 Gm38208-201ENSMUST00000192476 114 ntBASIC0.21□□□□□ -2.38
Cspg4Q8VHY0 Gm42924-201ENSMUST00000197261 185 ntBASIC0.21□□□□□ -2.38
Cspg4Q8VHY0 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC0.21□□□□□ -2.38
Cspg4Q8VHY0 AC157017.2-201ENSMUST00000218354 777 ntBASIC0.21□□□□□ -2.38
Cspg4Q8VHY0 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
Cspg4Q8VHY0 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
Cspg4Q8VHY0 Gm24622-201ENSMUST00000082619 162 ntBASIC0.21□□□□□ -2.38
Cspg4Q8VHY0 Gm22685-201ENSMUST00000082848 106 ntBASIC0.21□□□□□ -2.38
Cspg4Q8VHY0 Gm22091-201ENSMUST00000116908 127 ntBASIC0.2□□□□□ -2.38
Cspg4Q8VHY0 Gm14972-201ENSMUST00000121780 364 ntBASIC0.2□□□□□ -2.38
Cspg4Q8VHY0 Gm23208-201ENSMUST00000158666 127 ntBASIC0.2□□□□□ -2.38
Cspg4Q8VHY0 Ear-ps8-201ENSMUST00000161935 354 ntBASIC0.2□□□□□ -2.38
Cspg4Q8VHY0 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC0.2□□□□□ -2.38
Cspg4Q8VHY0 Gm18252-203ENSMUST00000215855 757 ntBASIC0.2□□□□□ -2.38
Cspg4Q8VHY0 Gm25703-201ENSMUST00000083123 151 ntBASIC0.2□□□□□ -2.38
Cspg4Q8VHY0 Snord1a-201ENSMUST00000083160 74 ntBASIC0.2□□□□□ -2.38
Cspg4Q8VHY0 Gm23431-201ENSMUST00000104006 107 ntBASIC0.2□□□□□ -2.38
Cspg4Q8VHY0 Gm23202-201ENSMUST00000104376 129 ntBASIC0.2□□□□□ -2.38
Cspg4Q8VHY0 Gm13454-201ENSMUST00000118166 483 ntBASIC0.2□□□□□ -2.38
Cspg4Q8VHY0 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC0.2□□□□□ -2.38
Cspg4Q8VHY0 Gm22522-201ENSMUST00000158271 151 ntBASIC0.2□□□□□ -2.38
Cspg4Q8VHY0 Gm22527-201ENSMUST00000158816 106 ntBASIC0.2□□□□□ -2.38
Cspg4Q8VHY0 Mir5104-201ENSMUST00000175319 94 ntBASIC0.2□□□□□ -2.38
Cspg4Q8VHY0 Gm28838-201ENSMUST00000186338 315 ntBASIC0.2□□□□□ -2.38
Cspg4Q8VHY0 Gm29635-201ENSMUST00000187221 315 ntBASIC0.2□□□□□ -2.38
Cspg4Q8VHY0 Gm29026-201ENSMUST00000187787 315 ntBASIC0.2□□□□□ -2.38
Cspg4Q8VHY0 Gm28797-201ENSMUST00000188543 315 ntBASIC0.2□□□□□ -2.38
Cspg4Q8VHY0 Gm28855-201ENSMUST00000188680 315 ntBASIC0.2□□□□□ -2.38
Cspg4Q8VHY0 Gm28705-201ENSMUST00000189548 315 ntBASIC0.2□□□□□ -2.38
Cspg4Q8VHY0 Gm28939-201ENSMUST00000190351 315 ntBASIC0.2□□□□□ -2.38
Cspg4Q8VHY0 Gm28223-201ENSMUST00000190469 315 ntBASIC0.2□□□□□ -2.38
Cspg4Q8VHY0 Gm29092-201ENSMUST00000190768 315 ntBASIC0.2□□□□□ -2.38
Cspg4Q8VHY0 Gm43432-201ENSMUST00000196352 121 ntBASIC0.2□□□□□ -2.38
Cspg4Q8VHY0 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC0.2□□□□□ -2.38
Cspg4Q8VHY0 AC122901.2-201ENSMUST00000216926 285 ntBASIC0.2□□□□□ -2.38
Cspg4Q8VHY0 AC114010.1-201ENSMUST00000222060 379 ntBASIC0.2□□□□□ -2.38
Cspg4Q8VHY0 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
Cspg4Q8VHY0 Gm15176-201ENSMUST00000117734 135 ntBASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 Gm13482-201ENSMUST00000119842 254 ntBASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 Gm12837-201ENSMUST00000120131 373 ntBASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 Gm7350-201ENSMUST00000120964 636 ntBASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 Gm25243-201ENSMUST00000174912 207 ntBASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 Gm18397-201ENSMUST00000176704 587 ntBASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 Gm29005-201ENSMUST00000186773 320 ntBASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 Gm44050-201ENSMUST00000204263 527 ntBASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 AC170810.3-201ENSMUST00000226177 374 ntBASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 AC166344.2-201ENSMUST00000226747 374 ntBASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 Gm24861-201ENSMUST00000083459 107 ntBASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 Gm25647-201ENSMUST00000101832 78 ntBASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 Gm25823-201ENSMUST00000101995 78 ntBASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 Gm14554-201ENSMUST00000119548 661 ntBASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 Gm12044-201ENSMUST00000120335 213 ntBASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 Gm11904-201ENSMUST00000120562 248 ntBASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 Gm15213-201ENSMUST00000122098 216 ntBASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 Gm23170-201ENSMUST00000157158 106 ntBASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 Gm26038-201ENSMUST00000158151 106 ntBASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 Gm25898-201ENSMUST00000158303 106 ntBASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 Gm24875-201ENSMUST00000158888 104 ntBASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 Gm15508-201ENSMUST00000160330 325 ntBASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 Gm24220-201ENSMUST00000177753 79 ntBASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 Gm25988-201ENSMUST00000177759 79 ntBASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 Gm23471-201ENSMUST00000177886 79 ntBASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 Gm26488-201ENSMUST00000178225 79 ntBASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 Gm23449-201ENSMUST00000179208 79 ntBASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 Gm25221-201ENSMUST00000180051 79 ntBASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 Gm28000-201ENSMUST00000184380 85 ntBASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 Gm36966-201ENSMUST00000192217 413 ntBASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 Gm37771-201ENSMUST00000193121 265 ntBASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 AC154257.2-201ENSMUST00000224166 340 ntBASIC0.19□□□□□ -2.38
Cspg4Q8VHY0 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
Cspg4Q8VHY0 Gm23528-201ENSMUST00000104571 132 ntBASIC0.18□□□□□ -2.38
Cspg4Q8VHY0 Gm11358-201ENSMUST00000122310 373 ntBASIC0.18□□□□□ -2.38
Cspg4Q8VHY0 Gm25598-201ENSMUST00000179031 107 ntBASIC0.18□□□□□ -2.38
Cspg4Q8VHY0 Gm5116-201ENSMUST00000187732 463 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms