Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Prpf39Q8K2Z2 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Prpf39Q8K2Z2 Gm44881-201ENSMUST00000205425 367 ntBASIC2.17□□□□□ -2.06
Prpf39Q8K2Z2 Gm18453-201ENSMUST00000208000 626 ntBASIC2.17□□□□□ -2.06
Prpf39Q8K2Z2 Gm45315-201ENSMUST00000209283 333 ntBASIC2.17□□□□□ -2.06
Prpf39Q8K2Z2 Gm45386-201ENSMUST00000210194 218 ntBASIC2.17□□□□□ -2.06
Prpf39Q8K2Z2 AC147240.1-201ENSMUST00000218767 431 ntBASIC2.17□□□□□ -2.06
Prpf39Q8K2Z2 Gm24623-201ENSMUST00000082616 194 ntBASIC2.17□□□□□ -2.06
Prpf39Q8K2Z2 Gm25130-201ENSMUST00000082650 156 ntBASIC2.17□□□□□ -2.06
Prpf39Q8K2Z2 Snora69-201ENSMUST00000083708 131 ntBASIC2.17□□□□□ -2.06
Prpf39Q8K2Z2 Snord7-201ENSMUST00000083781 97 ntBASIC2.17□□□□□ -2.06
Prpf39Q8K2Z2 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Prpf39Q8K2Z2 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Prpf39Q8K2Z2 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Prpf39Q8K2Z2 Gm14624-201ENSMUST00000117746 192 ntBASIC2.16□□□□□ -2.06
Prpf39Q8K2Z2 Gm15844-201ENSMUST00000118016 576 ntBASIC2.16□□□□□ -2.06
Prpf39Q8K2Z2 Gm14269-201ENSMUST00000120455 306 ntBASIC2.16□□□□□ -2.06
Prpf39Q8K2Z2 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Prpf39Q8K2Z2 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Prpf39Q8K2Z2 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Prpf39Q8K2Z2 Gm25933-201ENSMUST00000178943 108 ntBASIC2.16□□□□□ -2.06
Prpf39Q8K2Z2 Gm23963-201ENSMUST00000179603 77 ntBASIC2.16□□□□□ -2.06
Prpf39Q8K2Z2 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC2.16□□□□□ -2.06
Prpf39Q8K2Z2 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC2.16□□□□□ -2.06
Prpf39Q8K2Z2 Gm43976-201ENSMUST00000203637 235 ntBASIC2.16□□□□□ -2.06
Prpf39Q8K2Z2 Gm44687-201ENSMUST00000204975 235 ntBASIC2.16□□□□□ -2.06
Prpf39Q8K2Z2 Gm40810-201ENSMUST00000219149 253 ntBASIC2.16□□□□□ -2.06
Prpf39Q8K2Z2 AC126554.1-201ENSMUST00000222161 271 ntBASIC2.16□□□□□ -2.06
Prpf39Q8K2Z2 CT009713.9-201ENSMUST00000223604 389 ntBASIC2.16□□□□□ -2.06
Prpf39Q8K2Z2 AC166830.2-201ENSMUST00000225821 196 ntBASIC2.16□□□□□ -2.06
Prpf39Q8K2Z2 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Prpf39Q8K2Z2 Gm22978-201ENSMUST00000082607 160 ntBASIC2.16□□□□□ -2.06
Prpf39Q8K2Z2 Gm26457-201ENSMUST00000082678 78 ntBASIC2.16□□□□□ -2.06
Prpf39Q8K2Z2 Mir300-201ENSMUST00000083485 79 ntBASIC2.16□□□□□ -2.06
Prpf39Q8K2Z2 Mir29c-201ENSMUST00000083614 88 ntBASIC2.16□□□□□ -2.06
Prpf39Q8K2Z2 Mir181a-1-201ENSMUST00000083631 87 ntBASIC2.16□□□□□ -2.06
Prpf39Q8K2Z2 Gm42536-201ENSMUST00000197562 1613 ntBASIC2.16□□□□□ -2.06
Prpf39Q8K2Z2 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Prpf39Q8K2Z2 Gm26342-201ENSMUST00000104557 129 ntBASIC2.15□□□□□ -2.07
Prpf39Q8K2Z2 Mir344e-201ENSMUST00000104677 66 ntBASIC2.15□□□□□ -2.07
Prpf39Q8K2Z2 Snord98-201ENSMUST00000116819 65 ntBASIC2.15□□□□□ -2.07
Prpf39Q8K2Z2 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC2.15□□□□□ -2.07
Prpf39Q8K2Z2 Gm22654-201ENSMUST00000157874 105 ntBASIC2.15□□□□□ -2.07
Prpf39Q8K2Z2 Gm22800-201ENSMUST00000175627 94 ntBASIC2.15□□□□□ -2.07
Prpf39Q8K2Z2 Mir7093-201ENSMUST00000184195 101 ntBASIC2.15□□□□□ -2.07
Prpf39Q8K2Z2 Gm37054-201ENSMUST00000193481 543 ntBASIC2.15□□□□□ -2.07
Prpf39Q8K2Z2 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC2.15□□□□□ -2.07
Prpf39Q8K2Z2 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.15□□□□□ -2.07
Prpf39Q8K2Z2 Gm44149-201ENSMUST00000204256 226 ntBASIC2.15□□□□□ -2.07
Prpf39Q8K2Z2 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.15□□□□□ -2.07
Prpf39Q8K2Z2 Gm2829-201ENSMUST00000213121 499 ntBASIC2.15□□□□□ -2.07
Prpf39Q8K2Z2 Gm23453-201ENSMUST00000083326 106 ntBASIC2.15□□□□□ -2.07
Prpf39Q8K2Z2 Gm25651-201ENSMUST00000083782 119 ntBASIC2.15□□□□□ -2.07
Prpf39Q8K2Z2 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.15□□□□□ -2.07
Prpf39Q8K2Z2 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.15□□□□□ -2.07
Prpf39Q8K2Z2 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Prpf39Q8K2Z2 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Gm24098-201ENSMUST00000102075 109 ntBASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Gm25381-201ENSMUST00000102078 109 ntBASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Gm15281-201ENSMUST00000125181 351 ntBASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Gm22791-201ENSMUST00000157232 145 ntBASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Gm22080-201ENSMUST00000157591 106 ntBASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Gm24857-201ENSMUST00000158061 310 ntBASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Gm24358-201ENSMUST00000158424 288 ntBASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Gm23342-201ENSMUST00000158958 115 ntBASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Gm21737-201ENSMUST00000178112 664 ntBASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Gm20874-201ENSMUST00000178356 663 ntBASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Gm23191-201ENSMUST00000179147 107 ntBASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Gm20901-201ENSMUST00000180177 664 ntBASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Mir6917-201ENSMUST00000184111 61 ntBASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Mir7016-201ENSMUST00000184308 72 ntBASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Gm28058-201ENSMUST00000186421 264 ntBASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Gm28090-201ENSMUST00000189458 664 ntBASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Gm21647-201ENSMUST00000189755 664 ntBASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Gm43723-201ENSMUST00000196886 189 ntBASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Gm43865-201ENSMUST00000204721 127 ntBASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Gm44564-201ENSMUST00000207985 180 ntBASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Gm34783-201ENSMUST00000209159 303 ntBASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 AC154296.2-201ENSMUST00000214696 545 ntBASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 CT030182.3-201ENSMUST00000225986 582 ntBASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Gm25135-201ENSMUST00000082648 143 ntBASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Gm26126-201ENSMUST00000083188 164 ntBASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Gm23462-201ENSMUST00000083264 104 ntBASIC2.14□□□□□ -2.07
Prpf39Q8K2Z2 Gm25578-201ENSMUST00000083406 104 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms