Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm24997-201ENSMUST00000157910 105 ntBASIC2.27□□□□□ -2.05
Ccdc28bQ8CEG5 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.27□□□□□ -2.05
Ccdc28bQ8CEG5 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC2.27□□□□□ -2.05
Ccdc28bQ8CEG5 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC2.27□□□□□ -2.05
Ccdc28bQ8CEG5 Gm19202-201ENSMUST00000198096 808 ntBASIC2.27□□□□□ -2.05
Ccdc28bQ8CEG5 Gm45207-201ENSMUST00000207469 145 ntBASIC2.27□□□□□ -2.05
Ccdc28bQ8CEG5 n-R5s166-201ENSMUST00000082898 121 ntBASIC2.27□□□□□ -2.05
Ccdc28bQ8CEG5 Gm23723-201ENSMUST00000082996 132 ntBASIC2.27□□□□□ -2.05
Ccdc28bQ8CEG5 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Ccdc28bQ8CEG5 Gm42755-201ENSMUST00000198533 1493 ntBASIC2.26□□□□□ -2.05
Ccdc28bQ8CEG5 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Ccdc28bQ8CEG5 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Ccdc28bQ8CEG5 Mir682-201ENSMUST00000102281 96 ntBASIC2.26□□□□□ -2.05
Ccdc28bQ8CEG5 Mir466k-201ENSMUST00000116774 122 ntBASIC2.26□□□□□ -2.05
Ccdc28bQ8CEG5 Gm26156-201ENSMUST00000116999 123 ntBASIC2.26□□□□□ -2.05
Ccdc28bQ8CEG5 Gm22554-201ENSMUST00000157798 147 ntBASIC2.26□□□□□ -2.05
Ccdc28bQ8CEG5 Gm17100-201ENSMUST00000168963 272 ntBASIC2.26□□□□□ -2.05
Ccdc28bQ8CEG5 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Ccdc28bQ8CEG5 Trav5d-2-201ENSMUST00000196107 275 ntBASIC2.26□□□□□ -2.05
Ccdc28bQ8CEG5 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Ccdc28bQ8CEG5 Trav5n-2-201ENSMUST00000197136 275 ntBASIC2.26□□□□□ -2.05
Ccdc28bQ8CEG5 Gm32222-201ENSMUST00000203296 298 ntBASIC2.26□□□□□ -2.05
Ccdc28bQ8CEG5 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC2.26□□□□□ -2.05
Ccdc28bQ8CEG5 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.26□□□□□ -2.05
Ccdc28bQ8CEG5 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC2.26□□□□□ -2.05
Ccdc28bQ8CEG5 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.26□□□□□ -2.05
Ccdc28bQ8CEG5 Gm10025-201ENSMUST00000079568 372 ntBASIC2.26□□□□□ -2.05
Ccdc28bQ8CEG5 Gm22620-201ENSMUST00000082700 133 ntBASIC2.26□□□□□ -2.05
Ccdc28bQ8CEG5 Gm26107-201ENSMUST00000083972 107 ntBASIC2.26□□□□□ -2.05
Ccdc28bQ8CEG5 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC2.26□□□□□ -2.05
Ccdc28bQ8CEG5 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
Ccdc28bQ8CEG5 Gm37143-201ENSMUST00000195180 3259 ntBASIC2.25□□□□□ -2.05
Ccdc28bQ8CEG5 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Ccdc28bQ8CEG5 Gm24282-201ENSMUST00000104232 66 ntBASIC2.25□□□□□ -2.05
Ccdc28bQ8CEG5 Gm22023-201ENSMUST00000104354 130 ntBASIC2.25□□□□□ -2.05
Ccdc28bQ8CEG5 Gm14973-201ENSMUST00000117248 255 ntBASIC2.25□□□□□ -2.05
Ccdc28bQ8CEG5 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
Ccdc28bQ8CEG5 Gm23469-201ENSMUST00000157131 104 ntBASIC2.25□□□□□ -2.05
Ccdc28bQ8CEG5 Gm25910-201ENSMUST00000157620 140 ntBASIC2.25□□□□□ -2.05
Ccdc28bQ8CEG5 Gm26468-201ENSMUST00000158644 106 ntBASIC2.25□□□□□ -2.05
Ccdc28bQ8CEG5 Gm25956-201ENSMUST00000175115 217 ntBASIC2.25□□□□□ -2.05
Ccdc28bQ8CEG5 Gm37557-201ENSMUST00000191640 139 ntBASIC2.25□□□□□ -2.05
Ccdc28bQ8CEG5 Mir6375-201ENSMUST00000197176 95 ntBASIC2.25□□□□□ -2.05
Ccdc28bQ8CEG5 Gm18341-201ENSMUST00000197538 622 ntBASIC2.25□□□□□ -2.05
Ccdc28bQ8CEG5 Gm43739-201ENSMUST00000198294 307 ntBASIC2.25□□□□□ -2.05
Ccdc28bQ8CEG5 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC2.25□□□□□ -2.05
Ccdc28bQ8CEG5 AC122225.1-201ENSMUST00000215641 369 ntBASIC2.25□□□□□ -2.05
Ccdc28bQ8CEG5 AC154552.1-201ENSMUST00000222969 202 ntBASIC2.25□□□□□ -2.05
Ccdc28bQ8CEG5 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
Ccdc28bQ8CEG5 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Ccdc28bQ8CEG5 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.25□□□□□ -2.05
Ccdc28bQ8CEG5 Gm24044-201ENSMUST00000083107 156 ntBASIC2.25□□□□□ -2.05
Ccdc28bQ8CEG5 Snord14d-201ENSMUST00000083424 86 ntBASIC2.25□□□□□ -2.05
Ccdc28bQ8CEG5 Gm26329-201ENSMUST00000093723 110 ntBASIC2.25□□□□□ -2.05
Ccdc28bQ8CEG5 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
Ccdc28bQ8CEG5 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Ccdc28bQ8CEG5 Gm23142-201ENSMUST00000101848 105 ntBASIC2.24□□□□□ -2.05
Ccdc28bQ8CEG5 Gm26240-201ENSMUST00000101893 105 ntBASIC2.24□□□□□ -2.05
Ccdc28bQ8CEG5 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Ccdc28bQ8CEG5 Mir669g-201ENSMUST00000116809 123 ntBASIC2.24□□□□□ -2.05
Ccdc28bQ8CEG5 Gm14894-201ENSMUST00000117170 270 ntBASIC2.24□□□□□ -2.05
Ccdc28bQ8CEG5 Gm13439-201ENSMUST00000117541 409 ntBASIC2.24□□□□□ -2.05
Ccdc28bQ8CEG5 Gm13756-201ENSMUST00000117618 222 ntBASIC2.24□□□□□ -2.05
Ccdc28bQ8CEG5 Gm26256-201ENSMUST00000122499 186 ntBASIC2.24□□□□□ -2.05
Ccdc28bQ8CEG5 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Ccdc28bQ8CEG5 Gm24900-201ENSMUST00000158128 134 ntBASIC2.24□□□□□ -2.05
Ccdc28bQ8CEG5 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Ccdc28bQ8CEG5 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC2.24□□□□□ -2.05
Ccdc28bQ8CEG5 Gm5224-201ENSMUST00000183060 350 ntBASIC2.24□□□□□ -2.05
Ccdc28bQ8CEG5 Mir7013-201ENSMUST00000183540 72 ntBASIC2.24□□□□□ -2.05
Ccdc28bQ8CEG5 Gm27379-201ENSMUST00000183730 123 ntBASIC2.24□□□□□ -2.05
Ccdc28bQ8CEG5 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Ccdc28bQ8CEG5 Gm29665-201ENSMUST00000191457 528 ntBASIC2.24□□□□□ -2.05
Ccdc28bQ8CEG5 Gm37449-201ENSMUST00000193016 270 ntBASIC2.24□□□□□ -2.05
Ccdc28bQ8CEG5 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Ccdc28bQ8CEG5 Gm18658-201ENSMUST00000195558 270 ntBASIC2.24□□□□□ -2.05
Ccdc28bQ8CEG5 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC2.24□□□□□ -2.05
Ccdc28bQ8CEG5 Gm44524-201ENSMUST00000203899 271 ntBASIC2.24□□□□□ -2.05
Ccdc28bQ8CEG5 Gm44959-201ENSMUST00000209127 231 ntBASIC2.24□□□□□ -2.05
Ccdc28bQ8CEG5 Gm9318-201ENSMUST00000222444 438 ntBASIC2.24□□□□□ -2.05
Ccdc28bQ8CEG5 Snora69-201ENSMUST00000083708 131 ntBASIC2.24□□□□□ -2.05
Ccdc28bQ8CEG5 Gm25896-201ENSMUST00000083713 136 ntBASIC2.24□□□□□ -2.05
Ccdc28bQ8CEG5 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Ccdc28bQ8CEG5 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Ccdc28bQ8CEG5 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.23□□□□□ -2.05
Ccdc28bQ8CEG5 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Ccdc28bQ8CEG5 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Ccdc28bQ8CEG5 Gm22494-201ENSMUST00000104495 128 ntBASIC2.23□□□□□ -2.05
Ccdc28bQ8CEG5 Gm15714-201ENSMUST00000117168 250 ntBASIC2.23□□□□□ -2.05
Ccdc28bQ8CEG5 Gm24385-201ENSMUST00000122694 350 ntBASIC2.23□□□□□ -2.05
Ccdc28bQ8CEG5 Gm24905-201ENSMUST00000158129 104 ntBASIC2.23□□□□□ -2.05
Ccdc28bQ8CEG5 Gm23759-201ENSMUST00000158351 268 ntBASIC2.23□□□□□ -2.05
Ccdc28bQ8CEG5 Gm24769-201ENSMUST00000158506 129 ntBASIC2.23□□□□□ -2.05
Ccdc28bQ8CEG5 Gm44960-201ENSMUST00000207403 141 ntBASIC2.23□□□□□ -2.05
Ccdc28bQ8CEG5 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.23□□□□□ -2.05
Ccdc28bQ8CEG5 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.23□□□□□ -2.05
Ccdc28bQ8CEG5 AC133156.1-202ENSMUST00000227284 363 ntBASIC2.23□□□□□ -2.05
Ccdc28bQ8CEG5 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Ccdc28bQ8CEG5 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.23□□□□□ -2.05
Ccdc28bQ8CEG5 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms