Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm25651-201ENSMUST00000083782 119 ntBASIC2.5□□□□□ -2.01
Nup88Q8CEC0 Gm26164-201ENSMUST00000083793 104 ntBASIC2.5□□□□□ -2.01
Nup88Q8CEC0 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Nup88Q8CEC0 Gm23950-201ENSMUST00000104026 129 ntBASIC2.49□□□□□ -2.01
Nup88Q8CEC0 Gm42606-201ENSMUST00000114209 239 ntBASIC2.49□□□□□ -2.01
Nup88Q8CEC0 Gm15844-201ENSMUST00000118016 576 ntBASIC2.49□□□□□ -2.01
Nup88Q8CEC0 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.49□□□□□ -2.01
Nup88Q8CEC0 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.49□□□□□ -2.01
Nup88Q8CEC0 Gm25625-201ENSMUST00000157221 96 ntBASIC2.49□□□□□ -2.01
Nup88Q8CEC0 Gm25012-201ENSMUST00000158396 164 ntBASIC2.49□□□□□ -2.01
Nup88Q8CEC0 Gm20874-201ENSMUST00000178356 663 ntBASIC2.49□□□□□ -2.01
Nup88Q8CEC0 Gm23660-201ENSMUST00000178362 79 ntBASIC2.49□□□□□ -2.01
Nup88Q8CEC0 Gm24088-201ENSMUST00000179100 79 ntBASIC2.49□□□□□ -2.01
Nup88Q8CEC0 Gm25457-201ENSMUST00000179509 107 ntBASIC2.49□□□□□ -2.01
Nup88Q8CEC0 Mir6997-201ENSMUST00000184313 71 ntBASIC2.49□□□□□ -2.01
Nup88Q8CEC0 Gm27753-201ENSMUST00000184742 203 ntBASIC2.49□□□□□ -2.01
Nup88Q8CEC0 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC2.49□□□□□ -2.01
Nup88Q8CEC0 AC126267.1-201ENSMUST00000214282 284 ntBASIC2.49□□□□□ -2.01
Nup88Q8CEC0 Gm23453-201ENSMUST00000083326 106 ntBASIC2.49□□□□□ -2.01
Nup88Q8CEC0 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Nup88Q8CEC0 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Nup88Q8CEC0 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.48□□□□□ -2.01
Nup88Q8CEC0 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.48□□□□□ -2.01
Nup88Q8CEC0 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Nup88Q8CEC0 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.48□□□□□ -2.01
Nup88Q8CEC0 Gm14296-202ENSMUST00000108931 750 ntBASIC2.48□□□□□ -2.01
Nup88Q8CEC0 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Nup88Q8CEC0 Gm22151-201ENSMUST00000116963 58 ntBASIC2.48□□□□□ -2.01
Nup88Q8CEC0 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.48□□□□□ -2.01
Nup88Q8CEC0 Gm22099-201ENSMUST00000157925 123 ntBASIC2.48□□□□□ -2.01
Nup88Q8CEC0 Gm22803-201ENSMUST00000158049 283 ntBASIC2.48□□□□□ -2.01
Nup88Q8CEC0 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC2.48□□□□□ -2.01
Nup88Q8CEC0 Gm29604-201ENSMUST00000187176 163 ntBASIC2.48□□□□□ -2.01
Nup88Q8CEC0 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.48□□□□□ -2.01
Nup88Q8CEC0 Gm45791-201ENSMUST00000212908 352 ntBASIC2.48□□□□□ -2.01
Nup88Q8CEC0 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC2.48□□□□□ -2.01
Nup88Q8CEC0 AC164117.2-201ENSMUST00000222090 327 ntBASIC2.48□□□□□ -2.01
Nup88Q8CEC0 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.48□□□□□ -2.01
Nup88Q8CEC0 Gm26056-201ENSMUST00000083043 104 ntBASIC2.48□□□□□ -2.01
Nup88Q8CEC0 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.48□□□□□ -2.01
Nup88Q8CEC0 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Nup88Q8CEC0 Gm45557-201ENSMUST00000210004 1651 ntBASIC2.47□□□□□ -2.01
Nup88Q8CEC0 Mir701-201ENSMUST00000102208 109 ntBASIC2.47□□□□□ -2.01
Nup88Q8CEC0 Gm24857-201ENSMUST00000158061 310 ntBASIC2.47□□□□□ -2.01
Nup88Q8CEC0 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Nup88Q8CEC0 Mir7026-201ENSMUST00000184384 67 ntBASIC2.47□□□□□ -2.01
Nup88Q8CEC0 Gm28169-201ENSMUST00000190342 345 ntBASIC2.47□□□□□ -2.01
Nup88Q8CEC0 Gm44337-201ENSMUST00000196553 114 ntBASIC2.47□□□□□ -2.01
Nup88Q8CEC0 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC2.47□□□□□ -2.01
Nup88Q8CEC0 Gm45403-201ENSMUST00000209453 276 ntBASIC2.47□□□□□ -2.01
Nup88Q8CEC0 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.47□□□□□ -2.01
Nup88Q8CEC0 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.47□□□□□ -2.01
Nup88Q8CEC0 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.47□□□□□ -2.01
Nup88Q8CEC0 Gm5396-201ENSMUST00000121222 532 ntBASIC2.46□□□□□ -2.02
Nup88Q8CEC0 Gm22159-201ENSMUST00000158412 130 ntBASIC2.46□□□□□ -2.02
Nup88Q8CEC0 Gm24499-201ENSMUST00000158446 104 ntBASIC2.46□□□□□ -2.02
Nup88Q8CEC0 Gm24085-201ENSMUST00000175172 116 ntBASIC2.46□□□□□ -2.02
Nup88Q8CEC0 Mir7009-201ENSMUST00000184519 64 ntBASIC2.46□□□□□ -2.02
Nup88Q8CEC0 Gm18356-201ENSMUST00000185677 623 ntBASIC2.46□□□□□ -2.02
Nup88Q8CEC0 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.46□□□□□ -2.02
Nup88Q8CEC0 Gm42570-201ENSMUST00000195937 292 ntBASIC2.46□□□□□ -2.02
Nup88Q8CEC0 Gm45119-201ENSMUST00000207612 199 ntBASIC2.46□□□□□ -2.02
Nup88Q8CEC0 Gm45704-201ENSMUST00000212582 403 ntBASIC2.46□□□□□ -2.02
Nup88Q8CEC0 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.46□□□□□ -2.02
Nup88Q8CEC0 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC2.46□□□□□ -2.02
Nup88Q8CEC0 AC164297.3-201ENSMUST00000224238 94 ntBASIC2.46□□□□□ -2.02
Nup88Q8CEC0 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.46□□□□□ -2.02
Nup88Q8CEC0 Mir222-201ENSMUST00000083537 79 ntBASIC2.46□□□□□ -2.02
Nup88Q8CEC0 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
Nup88Q8CEC0 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Nup88Q8CEC0 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Nup88Q8CEC0 Gm37598-201ENSMUST00000194506 1301 ntBASIC2.45□□□□□ -2.02
Nup88Q8CEC0 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Nup88Q8CEC0 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Nup88Q8CEC0 Gm14906-201ENSMUST00000119265 390 ntBASIC2.45□□□□□ -2.02
Nup88Q8CEC0 Gm25269-201ENSMUST00000122601 104 ntBASIC2.45□□□□□ -2.02
Nup88Q8CEC0 Gm23381-201ENSMUST00000157676 94 ntBASIC2.45□□□□□ -2.02
Nup88Q8CEC0 Gm22435-201ENSMUST00000158552 128 ntBASIC2.45□□□□□ -2.02
Nup88Q8CEC0 Gm25020-201ENSMUST00000178071 107 ntBASIC2.45□□□□□ -2.02
Nup88Q8CEC0 Ighv2-8-201ENSMUST00000193935 262 ntBASIC2.45□□□□□ -2.02
Nup88Q8CEC0 Gm43978-201ENSMUST00000203491 451 ntBASIC2.45□□□□□ -2.02
Nup88Q8CEC0 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC2.45□□□□□ -2.02
Nup88Q8CEC0 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.45□□□□□ -2.02
Nup88Q8CEC0 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.45□□□□□ -2.02
Nup88Q8CEC0 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.45□□□□□ -2.02
Nup88Q8CEC0 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC2.45□□□□□ -2.02
Nup88Q8CEC0 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Nup88Q8CEC0 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.45□□□□□ -2.02
Nup88Q8CEC0 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.44□□□□□ -2.02
Nup88Q8CEC0 Gm24049-201ENSMUST00000102409 100 ntBASIC2.44□□□□□ -2.02
Nup88Q8CEC0 Gm14215-201ENSMUST00000120578 221 ntBASIC2.44□□□□□ -2.02
Nup88Q8CEC0 Gm22073-201ENSMUST00000122668 189 ntBASIC2.44□□□□□ -2.02
Nup88Q8CEC0 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.44□□□□□ -2.02
Nup88Q8CEC0 Gm25982-201ENSMUST00000157920 101 ntBASIC2.44□□□□□ -2.02
Nup88Q8CEC0 Gm24192-201ENSMUST00000157978 145 ntBASIC2.44□□□□□ -2.02
Nup88Q8CEC0 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Nup88Q8CEC0 Gm22308-201ENSMUST00000177609 107 ntBASIC2.44□□□□□ -2.02
Nup88Q8CEC0 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC2.44□□□□□ -2.02
Nup88Q8CEC0 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC2.44□□□□□ -2.02
Nup88Q8CEC0 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC2.44□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms