Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm24084-201ENSMUST00000175173 137 ntBASIC2.55□□□□□ -2
Atg4aQ8C9S8 Gm23963-201ENSMUST00000179603 77 ntBASIC2.55□□□□□ -2
Atg4aQ8C9S8 Mir6402-201ENSMUST00000183406 80 ntBASIC2.55□□□□□ -2
Atg4aQ8C9S8 Gm28825-201ENSMUST00000186233 238 ntBASIC2.55□□□□□ -2
Atg4aQ8C9S8 Gm5329-201ENSMUST00000186898 463 ntBASIC2.55□□□□□ -2
Atg4aQ8C9S8 Gm44476-201ENSMUST00000196225 91 ntBASIC2.55□□□□□ -2
Atg4aQ8C9S8 Gm43739-201ENSMUST00000198294 307 ntBASIC2.55□□□□□ -2
Atg4aQ8C9S8 Gm44419-201ENSMUST00000203338 229 ntBASIC2.55□□□□□ -2
Atg4aQ8C9S8 Gm44794-201ENSMUST00000206550 411 ntBASIC2.55□□□□□ -2
Atg4aQ8C9S8 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Atg4aQ8C9S8 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.55□□□□□ -2
Atg4aQ8C9S8 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC2.55□□□□□ -2
Atg4aQ8C9S8 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC2.55□□□□□ -2
Atg4aQ8C9S8 Gm26327-201ENSMUST00000093724 111 ntBASIC2.55□□□□□ -2
Atg4aQ8C9S8 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC2.55□□□□□ -2
Atg4aQ8C9S8 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Atg4aQ8C9S8 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.55□□□□□ -2
Atg4aQ8C9S8 Gm15183-201ENSMUST00000118933 348 ntBASIC2.54□□□□□ -2
Atg4aQ8C9S8 Gm12785-201ENSMUST00000122052 172 ntBASIC2.54□□□□□ -2
Atg4aQ8C9S8 Gm23829-201ENSMUST00000157392 270 ntBASIC2.54□□□□□ -2
Atg4aQ8C9S8 Gm22101-201ENSMUST00000157928 103 ntBASIC2.54□□□□□ -2
Atg4aQ8C9S8 Gm22389-201ENSMUST00000158193 301 ntBASIC2.54□□□□□ -2
Atg4aQ8C9S8 Mir6917-201ENSMUST00000184111 61 ntBASIC2.54□□□□□ -2
Atg4aQ8C9S8 Gm27753-201ENSMUST00000184742 203 ntBASIC2.54□□□□□ -2
Atg4aQ8C9S8 Gm27332-201ENSMUST00000184893 112 ntBASIC2.54□□□□□ -2
Atg4aQ8C9S8 Gm29397-201ENSMUST00000185205 333 ntBASIC2.54□□□□□ -2
Atg4aQ8C9S8 Gm20058-201ENSMUST00000186939 284 ntBASIC2.54□□□□□ -2
Atg4aQ8C9S8 Gm37338-201ENSMUST00000191986 127 ntBASIC2.54□□□□□ -2
Atg4aQ8C9S8 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.54□□□□□ -2
Atg4aQ8C9S8 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.54□□□□□ -2
Atg4aQ8C9S8 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.54□□□□□ -2
Atg4aQ8C9S8 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.54□□□□□ -2
Atg4aQ8C9S8 AC130829.3-201ENSMUST00000222735 154 ntBASIC2.54□□□□□ -2
Atg4aQ8C9S8 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.54□□□□□ -2
Atg4aQ8C9S8 Gm24764-201ENSMUST00000083686 199 ntBASIC2.54□□□□□ -2
Atg4aQ8C9S8 Gm23041-201ENSMUST00000083868 106 ntBASIC2.54□□□□□ -2
Atg4aQ8C9S8 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.54□□□□□ -2
Atg4aQ8C9S8 CT030170.3-201ENSMUST00000221205 1815 ntBASIC2.54□□□□□ -2
Atg4aQ8C9S8 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.54□□□□□ -2
Atg4aQ8C9S8 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Atg4aQ8C9S8 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.53□□□□□ -2
Atg4aQ8C9S8 Gm25094-201ENSMUST00000103992 131 ntBASIC2.53□□□□□ -2
Atg4aQ8C9S8 Mir878-201ENSMUST00000104680 78 ntBASIC2.53□□□□□ -2
Atg4aQ8C9S8 Gm13439-201ENSMUST00000117541 409 ntBASIC2.53□□□□□ -2
Atg4aQ8C9S8 Gm12934-201ENSMUST00000119221 343 ntBASIC2.53□□□□□ -2
Atg4aQ8C9S8 Gm26406-201ENSMUST00000158503 124 ntBASIC2.53□□□□□ -2
Atg4aQ8C9S8 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Atg4aQ8C9S8 Mir5624-201ENSMUST00000176635 61 ntBASIC2.53□□□□□ -2
Atg4aQ8C9S8 Mir6370-201ENSMUST00000183510 120 ntBASIC2.53□□□□□ -2
Atg4aQ8C9S8 Gm37037-201ENSMUST00000194475 424 ntBASIC2.53□□□□□ -2
Atg4aQ8C9S8 Gm43510-201ENSMUST00000197922 353 ntBASIC2.53□□□□□ -2
Atg4aQ8C9S8 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.53□□□□□ -2
Atg4aQ8C9S8 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC2.53□□□□□ -2
Atg4aQ8C9S8 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.53□□□□□ -2
Atg4aQ8C9S8 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC2.53□□□□□ -2
Atg4aQ8C9S8 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.53□□□□□ -2
Atg4aQ8C9S8 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Atg4aQ8C9S8 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Atg4aQ8C9S8 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.52□□□□□ -2.01
Atg4aQ8C9S8 Gm42755-201ENSMUST00000198533 1493 ntBASIC2.52□□□□□ -2.01
Atg4aQ8C9S8 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
Atg4aQ8C9S8 Gm23142-201ENSMUST00000101848 105 ntBASIC2.52□□□□□ -2.01
Atg4aQ8C9S8 Gm26240-201ENSMUST00000101893 105 ntBASIC2.52□□□□□ -2.01
Atg4aQ8C9S8 Gm12924-201ENSMUST00000121747 318 ntBASIC2.52□□□□□ -2.01
Atg4aQ8C9S8 Gm24716-201ENSMUST00000157524 104 ntBASIC2.52□□□□□ -2.01
Atg4aQ8C9S8 Gm25460-201ENSMUST00000157954 127 ntBASIC2.52□□□□□ -2.01
Atg4aQ8C9S8 Gm22113-201ENSMUST00000158343 104 ntBASIC2.52□□□□□ -2.01
Atg4aQ8C9S8 Gm27443-201ENSMUST00000184660 98 ntBASIC2.52□□□□□ -2.01
Atg4aQ8C9S8 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.52□□□□□ -2.01
Atg4aQ8C9S8 Gm45445-201ENSMUST00000209586 232 ntBASIC2.52□□□□□ -2.01
Atg4aQ8C9S8 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.52□□□□□ -2.01
Atg4aQ8C9S8 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.52□□□□□ -2.01
Atg4aQ8C9S8 AC135292.1-201ENSMUST00000227665 204 ntBASIC2.52□□□□□ -2.01
Atg4aQ8C9S8 Gm22443-201ENSMUST00000082890 107 ntBASIC2.52□□□□□ -2.01
Atg4aQ8C9S8 Gm23579-201ENSMUST00000158528 103 ntBASIC2.51□□□□□ -2.01
Atg4aQ8C9S8 Gm23342-201ENSMUST00000158958 115 ntBASIC2.51□□□□□ -2.01
Atg4aQ8C9S8 Gm17065-201ENSMUST00000165245 239 ntBASIC2.51□□□□□ -2.01
Atg4aQ8C9S8 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Atg4aQ8C9S8 Gm22853-201ENSMUST00000174974 131 ntBASIC2.51□□□□□ -2.01
Atg4aQ8C9S8 Gm24618-201ENSMUST00000177718 94 ntBASIC2.51□□□□□ -2.01
Atg4aQ8C9S8 Gm23953-201ENSMUST00000178214 94 ntBASIC2.51□□□□□ -2.01
Atg4aQ8C9S8 Gm26332-201ENSMUST00000179813 94 ntBASIC2.51□□□□□ -2.01
Atg4aQ8C9S8 Gm22863-201ENSMUST00000180265 94 ntBASIC2.51□□□□□ -2.01
Atg4aQ8C9S8 Gm29658-201ENSMUST00000185404 230 ntBASIC2.51□□□□□ -2.01
Atg4aQ8C9S8 Gm20257-202ENSMUST00000188643 130 ntBASIC2.51□□□□□ -2.01
Atg4aQ8C9S8 Gm28288-201ENSMUST00000191019 214 ntBASIC2.51□□□□□ -2.01
Atg4aQ8C9S8 Ighv1-46-201ENSMUST00000193988 351 ntBASIC2.51□□□□□ -2.01
Atg4aQ8C9S8 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.51□□□□□ -2.01
Atg4aQ8C9S8 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC2.51□□□□□ -2.01
Atg4aQ8C9S8 Gm25896-201ENSMUST00000083713 136 ntBASIC2.51□□□□□ -2.01
Atg4aQ8C9S8 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Atg4aQ8C9S8 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC2.5□□□□□ -2.01
Atg4aQ8C9S8 AC121844.2-201ENSMUST00000219067 2066 ntBASIC2.5□□□□□ -2.01
Atg4aQ8C9S8 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.5□□□□□ -2.01
Atg4aQ8C9S8 Gm11935-201ENSMUST00000118608 399 ntBASIC2.5□□□□□ -2.01
Atg4aQ8C9S8 Gm22598-201ENSMUST00000157600 127 ntBASIC2.5□□□□□ -2.01
Atg4aQ8C9S8 Mir5118-201ENSMUST00000175551 67 ntBASIC2.5□□□□□ -2.01
Atg4aQ8C9S8 Gm23933-201ENSMUST00000178405 79 ntBASIC2.5□□□□□ -2.01
Atg4aQ8C9S8 Mir7667-201ENSMUST00000183866 63 ntBASIC2.5□□□□□ -2.01
Atg4aQ8C9S8 Gm27582-201ENSMUST00000184084 126 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 104.7 ms