Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm42805-201ENSMUST00000196158 276 ntBASIC1.23□□□□□ -2.21
Usp47Q8BY87 Gm42925-201ENSMUST00000197359 285 ntBASIC1.23□□□□□ -2.21
Usp47Q8BY87 Mir219b-201ENSMUST00000198317 65 ntBASIC1.23□□□□□ -2.21
Usp47Q8BY87 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Usp47Q8BY87 Gm44615-201ENSMUST00000206548 358 ntBASIC1.23□□□□□ -2.21
Usp47Q8BY87 Gm18774-201ENSMUST00000218269 601 ntBASIC1.23□□□□□ -2.21
Usp47Q8BY87 AC153522.1-201ENSMUST00000220047 1090 ntBASIC1.23□□□□□ -2.21
Usp47Q8BY87 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC1.23□□□□□ -2.21
Usp47Q8BY87 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.23□□□□□ -2.21
Usp47Q8BY87 Gm22299-201ENSMUST00000082663 136 ntBASIC1.23□□□□□ -2.21
Usp47Q8BY87 Gm25853-201ENSMUST00000082793 132 ntBASIC1.23□□□□□ -2.21
Usp47Q8BY87 Gm23100-201ENSMUST00000083455 141 ntBASIC1.23□□□□□ -2.21
Usp47Q8BY87 Mir350-201ENSMUST00000083639 99 ntBASIC1.23□□□□□ -2.21
Usp47Q8BY87 Gm26175-201ENSMUST00000083794 131 ntBASIC1.23□□□□□ -2.21
Usp47Q8BY87 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Usp47Q8BY87 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC1.23□□□□□ -2.21
Usp47Q8BY87 Gm14013-201ENSMUST00000119006 270 ntBASIC1.22□□□□□ -2.21
Usp47Q8BY87 Gm23429-201ENSMUST00000122486 149 ntBASIC1.22□□□□□ -2.21
Usp47Q8BY87 Gm22731-201ENSMUST00000158086 94 ntBASIC1.22□□□□□ -2.21
Usp47Q8BY87 Gm22800-201ENSMUST00000175627 94 ntBASIC1.22□□□□□ -2.21
Usp47Q8BY87 Mir7079-201ENSMUST00000184697 69 ntBASIC1.22□□□□□ -2.21
Usp47Q8BY87 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC1.22□□□□□ -2.21
Usp47Q8BY87 Gm38268-201ENSMUST00000195813 193 ntBASIC1.22□□□□□ -2.21
Usp47Q8BY87 Gm44462-201ENSMUST00000199696 129 ntBASIC1.22□□□□□ -2.21
Usp47Q8BY87 Gm19032-201ENSMUST00000208584 592 ntBASIC1.22□□□□□ -2.21
Usp47Q8BY87 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.22□□□□□ -2.21
Usp47Q8BY87 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.22□□□□□ -2.21
Usp47Q8BY87 CT485612.4-201ENSMUST00000223405 250 ntBASIC1.22□□□□□ -2.21
Usp47Q8BY87 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
Usp47Q8BY87 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.22□□□□□ -2.21
Usp47Q8BY87 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.22□□□□□ -2.21
Usp47Q8BY87 Mir687-201ENSMUST00000102166 89 ntBASIC1.21□□□□□ -2.21
Usp47Q8BY87 Gm6568-201ENSMUST00000122274 697 ntBASIC1.21□□□□□ -2.21
Usp47Q8BY87 Gm23829-201ENSMUST00000157392 270 ntBASIC1.21□□□□□ -2.21
Usp47Q8BY87 Gm20477-201ENSMUST00000174028 280 ntBASIC1.21□□□□□ -2.21
Usp47Q8BY87 Gm25451-201ENSMUST00000177832 121 ntBASIC1.21□□□□□ -2.21
Usp47Q8BY87 Gm22633-201ENSMUST00000179834 107 ntBASIC1.21□□□□□ -2.21
Usp47Q8BY87 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.21□□□□□ -2.21
Usp47Q8BY87 Gm10193-201ENSMUST00000188288 231 ntBASIC1.21□□□□□ -2.21
Usp47Q8BY87 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.21□□□□□ -2.21
Usp47Q8BY87 Gm43529-201ENSMUST00000199178 412 ntBASIC1.21□□□□□ -2.21
Usp47Q8BY87 Gm44052-201ENSMUST00000203382 396 ntBASIC1.21□□□□□ -2.21
Usp47Q8BY87 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC1.21□□□□□ -2.21
Usp47Q8BY87 Gm17991-201ENSMUST00000208139 297 ntBASIC1.21□□□□□ -2.21
Usp47Q8BY87 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.21□□□□□ -2.21
Usp47Q8BY87 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC1.21□□□□□ -2.21
Usp47Q8BY87 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.21□□□□□ -2.21
Usp47Q8BY87 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC1.21□□□□□ -2.21
Usp47Q8BY87 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC1.21□□□□□ -2.21
Usp47Q8BY87 Gm23126-201ENSMUST00000104260 134 ntBASIC1.21□□□□□ -2.22
Usp47Q8BY87 Gm14551-201ENSMUST00000120802 256 ntBASIC1.21□□□□□ -2.22
Usp47Q8BY87 Gm13368-201ENSMUST00000122443 430 ntBASIC1.21□□□□□ -2.22
Usp47Q8BY87 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Usp47Q8BY87 Gm26358-201ENSMUST00000158215 97 ntBASIC1.21□□□□□ -2.22
Usp47Q8BY87 Gm24111-201ENSMUST00000175491 97 ntBASIC1.21□□□□□ -2.22
Usp47Q8BY87 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC1.21□□□□□ -2.22
Usp47Q8BY87 Gm42533-201ENSMUST00000196247 157 ntBASIC1.21□□□□□ -2.22
Usp47Q8BY87 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC1.21□□□□□ -2.22
Usp47Q8BY87 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC1.21□□□□□ -2.22
Usp47Q8BY87 AC156574.2-201ENSMUST00000228023 282 ntBASIC1.21□□□□□ -2.22
Usp47Q8BY87 Ear14-201ENSMUST00000049559 468 ntBASIC1.21□□□□□ -2.22
Usp47Q8BY87 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Usp47Q8BY87 Gm26263-201ENSMUST00000083281 164 ntBASIC1.21□□□□□ -2.22
Usp47Q8BY87 Gm24579-201ENSMUST00000103964 144 ntBASIC1.2□□□□□ -2.22
Usp47Q8BY87 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Usp47Q8BY87 Gm25541-201ENSMUST00000116888 126 ntBASIC1.2□□□□□ -2.22
Usp47Q8BY87 Gm13577-201ENSMUST00000121365 205 ntBASIC1.2□□□□□ -2.22
Usp47Q8BY87 Gm6025-201ENSMUST00000121517 201 ntBASIC1.2□□□□□ -2.22
Usp47Q8BY87 Gm6956-201ENSMUST00000134724 546 ntBASIC1.2□□□□□ -2.22
Usp47Q8BY87 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC1.2□□□□□ -2.22
Usp47Q8BY87 Gm22768-201ENSMUST00000158366 153 ntBASIC1.2□□□□□ -2.22
Usp47Q8BY87 Gm37757-201ENSMUST00000193072 210 ntBASIC1.2□□□□□ -2.22
Usp47Q8BY87 AC154506.3-201ENSMUST00000225417 213 ntBASIC1.2□□□□□ -2.22
Usp47Q8BY87 Snora3-201ENSMUST00000083082 132 ntBASIC1.2□□□□□ -2.22
Usp47Q8BY87 Mir429-201ENSMUST00000083493 83 ntBASIC1.2□□□□□ -2.22
Usp47Q8BY87 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Usp47Q8BY87 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.19□□□□□ -2.22
Usp47Q8BY87 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.19□□□□□ -2.22
Usp47Q8BY87 Mir223-201ENSMUST00000102112 110 ntBASIC1.19□□□□□ -2.22
Usp47Q8BY87 Gm12370-201ENSMUST00000117809 604 ntBASIC1.19□□□□□ -2.22
Usp47Q8BY87 Gm23752-201ENSMUST00000157584 115 ntBASIC1.19□□□□□ -2.22
Usp47Q8BY87 Gm24439-201ENSMUST00000157894 117 ntBASIC1.19□□□□□ -2.22
Usp47Q8BY87 Gm18357-201ENSMUST00000188184 580 ntBASIC1.19□□□□□ -2.22
Usp47Q8BY87 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC1.19□□□□□ -2.22
Usp47Q8BY87 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC1.19□□□□□ -2.22
Usp47Q8BY87 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC1.19□□□□□ -2.22
Usp47Q8BY87 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.19□□□□□ -2.22
Usp47Q8BY87 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Usp47Q8BY87 Gm24079-201ENSMUST00000104352 132 ntBASIC1.18□□□□□ -2.22
Usp47Q8BY87 Gm22236-201ENSMUST00000157093 106 ntBASIC1.18□□□□□ -2.22
Usp47Q8BY87 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC1.18□□□□□ -2.22
Usp47Q8BY87 Mir3057-201ENSMUST00000175040 91 ntBASIC1.18□□□□□ -2.22
Usp47Q8BY87 Gm23355-201ENSMUST00000177614 107 ntBASIC1.18□□□□□ -2.22
Usp47Q8BY87 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
Usp47Q8BY87 Mir7683-201ENSMUST00000183842 61 ntBASIC1.18□□□□□ -2.22
Usp47Q8BY87 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC1.18□□□□□ -2.22
Usp47Q8BY87 Gm44482-201ENSMUST00000199232 103 ntBASIC1.18□□□□□ -2.22
Usp47Q8BY87 AC153957.1-201ENSMUST00000215235 229 ntBASIC1.18□□□□□ -2.22
Usp47Q8BY87 Gm22508-201ENSMUST00000082772 110 ntBASIC1.18□□□□□ -2.22
Usp47Q8BY87 Gm23721-201ENSMUST00000083005 107 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms