Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Usp40Q8BWR4 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
Usp40Q8BWR4 Gm24122-201ENSMUST00000104107 132 ntBASIC4□□□□□ -1.77
Usp40Q8BWR4 Gm24172-201ENSMUST00000104127 117 ntBASIC4□□□□□ -1.77
Usp40Q8BWR4 Gm24234-201ENSMUST00000104316 107 ntBASIC4□□□□□ -1.77
Usp40Q8BWR4 Gm22496-201ENSMUST00000104493 88 ntBASIC4□□□□□ -1.77
Usp40Q8BWR4 Gm22321-201ENSMUST00000157152 104 ntBASIC4□□□□□ -1.77
Usp40Q8BWR4 Gm23585-201ENSMUST00000157656 102 ntBASIC4□□□□□ -1.77
Usp40Q8BWR4 Gm25528-201ENSMUST00000180264 132 ntBASIC4□□□□□ -1.77
Usp40Q8BWR4 Gm29005-201ENSMUST00000186773 320 ntBASIC4□□□□□ -1.77
Usp40Q8BWR4 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC4□□□□□ -1.77
Usp40Q8BWR4 Gm38356-201ENSMUST00000194313 408 ntBASIC4□□□□□ -1.77
Usp40Q8BWR4 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC4□□□□□ -1.77
Usp40Q8BWR4 AC173345.2-201ENSMUST00000222795 153 ntBASIC4□□□□□ -1.77
Usp40Q8BWR4 AC183092.1-201ENSMUST00000224301 153 ntBASIC4□□□□□ -1.77
Usp40Q8BWR4 Gm23932-201ENSMUST00000082914 107 ntBASIC4□□□□□ -1.77
Usp40Q8BWR4 Gm24204-201ENSMUST00000082950 107 ntBASIC4□□□□□ -1.77
Usp40Q8BWR4 Gm22970-201ENSMUST00000083304 186 ntBASIC4□□□□□ -1.77
Usp40Q8BWR4 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC4□□□□□ -1.77
Usp40Q8BWR4 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
Usp40Q8BWR4 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Usp40Q8BWR4 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Usp40Q8BWR4 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
Usp40Q8BWR4 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC3.99□□□□□ -1.77
Usp40Q8BWR4 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
Usp40Q8BWR4 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.99□□□□□ -1.77
Usp40Q8BWR4 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Usp40Q8BWR4 Gm11429-201ENSMUST00000119089 144 ntBASIC3.99□□□□□ -1.77
Usp40Q8BWR4 Defa-ps8-201ENSMUST00000120972 279 ntBASIC3.99□□□□□ -1.77
Usp40Q8BWR4 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC3.99□□□□□ -1.77
Usp40Q8BWR4 Gm25637-201ENSMUST00000157529 107 ntBASIC3.99□□□□□ -1.77
Usp40Q8BWR4 Gm26187-201ENSMUST00000157693 101 ntBASIC3.99□□□□□ -1.77
Usp40Q8BWR4 Mir1967-201ENSMUST00000157789 82 ntBASIC3.99□□□□□ -1.77
Usp40Q8BWR4 Gm26001-201ENSMUST00000157989 103 ntBASIC3.99□□□□□ -1.77
Usp40Q8BWR4 Gm26157-201ENSMUST00000158974 126 ntBASIC3.99□□□□□ -1.77
Usp40Q8BWR4 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Usp40Q8BWR4 Gm28598-201ENSMUST00000186490 615 ntBASIC3.99□□□□□ -1.77
Usp40Q8BWR4 Gm28828-201ENSMUST00000186601 696 ntBASIC3.99□□□□□ -1.77
Usp40Q8BWR4 Gm29268-201ENSMUST00000188669 615 ntBASIC3.99□□□□□ -1.77
Usp40Q8BWR4 Gm37172-201ENSMUST00000191926 615 ntBASIC3.99□□□□□ -1.77
Usp40Q8BWR4 Gm37693-201ENSMUST00000194562 234 ntBASIC3.99□□□□□ -1.77
Usp40Q8BWR4 Gm19620-201ENSMUST00000195972 434 ntBASIC3.99□□□□□ -1.77
Usp40Q8BWR4 Gm43704-201ENSMUST00000196164 496 ntBASIC3.99□□□□□ -1.77
Usp40Q8BWR4 Gm45013-201ENSMUST00000206883 178 ntBASIC3.99□□□□□ -1.77
Usp40Q8BWR4 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.99□□□□□ -1.77
Usp40Q8BWR4 Gm18502-201ENSMUST00000218679 199 ntBASIC3.99□□□□□ -1.77
Usp40Q8BWR4 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC3.99□□□□□ -1.77
Usp40Q8BWR4 Gm23264-201ENSMUST00000083372 107 ntBASIC3.99□□□□□ -1.77
Usp40Q8BWR4 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Usp40Q8BWR4 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.99□□□□□ -1.77
Usp40Q8BWR4 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Usp40Q8BWR4 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Usp40Q8BWR4 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
Usp40Q8BWR4 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Usp40Q8BWR4 Gm15497-201ENSMUST00000119137 551 ntBASIC3.98□□□□□ -1.77
Usp40Q8BWR4 Gm15760-201ENSMUST00000119553 283 ntBASIC3.98□□□□□ -1.77
Usp40Q8BWR4 Gm25270-201ENSMUST00000122606 138 ntBASIC3.98□□□□□ -1.77
Usp40Q8BWR4 Gm25985-201ENSMUST00000122677 107 ntBASIC3.98□□□□□ -1.77
Usp40Q8BWR4 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC3.98□□□□□ -1.77
Usp40Q8BWR4 Gm25621-201ENSMUST00000157223 114 ntBASIC3.98□□□□□ -1.77
Usp40Q8BWR4 Gm25283-201ENSMUST00000157272 77 ntBASIC3.98□□□□□ -1.77
Usp40Q8BWR4 Mir21b-201ENSMUST00000184317 108 ntBASIC3.98□□□□□ -1.77
Usp40Q8BWR4 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Usp40Q8BWR4 Mir721-201ENSMUST00000200230 88 ntBASIC3.98□□□□□ -1.77
Usp40Q8BWR4 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC3.98□□□□□ -1.77
Usp40Q8BWR4 AC154527.5-201ENSMUST00000224448 496 ntBASIC3.98□□□□□ -1.77
Usp40Q8BWR4 AC165415.1-201ENSMUST00000228924 273 ntBASIC3.98□□□□□ -1.77
Usp40Q8BWR4 Gm23650-201ENSMUST00000083355 70 ntBASIC3.98□□□□□ -1.77
Usp40Q8BWR4 Mir21a-201ENSMUST00000083521 92 ntBASIC3.98□□□□□ -1.77
Usp40Q8BWR4 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Usp40Q8BWR4 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Usp40Q8BWR4 Gm19428-201ENSMUST00000220512 1995 ntBASIC3.98□□□□□ -1.77
Usp40Q8BWR4 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Usp40Q8BWR4 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Usp40Q8BWR4 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Usp40Q8BWR4 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.97□□□□□ -1.77
Usp40Q8BWR4 DQ267100-201ENSMUST00000122600 72 ntBASIC3.97□□□□□ -1.77
Usp40Q8BWR4 Gm24879-201ENSMUST00000158386 143 ntBASIC3.97□□□□□ -1.77
Usp40Q8BWR4 Gm27733-201ENSMUST00000184803 68 ntBASIC3.97□□□□□ -1.77
Usp40Q8BWR4 Gm29603-201ENSMUST00000186792 334 ntBASIC3.97□□□□□ -1.77
Usp40Q8BWR4 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC3.97□□□□□ -1.77
Usp40Q8BWR4 Gm43978-201ENSMUST00000203491 451 ntBASIC3.97□□□□□ -1.77
Usp40Q8BWR4 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Usp40Q8BWR4 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.97□□□□□ -1.77
Usp40Q8BWR4 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Usp40Q8BWR4 Gm21940-201ENSMUST00000204940 2278 ntBASIC3.96□□□□□ -1.78
Usp40Q8BWR4 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
Usp40Q8BWR4 Gm11471-201ENSMUST00000121824 198 ntBASIC3.96□□□□□ -1.78
Usp40Q8BWR4 Gm26275-201ENSMUST00000157101 268 ntBASIC3.96□□□□□ -1.78
Usp40Q8BWR4 Gm25115-201ENSMUST00000157187 140 ntBASIC3.96□□□□□ -1.78
Usp40Q8BWR4 Mir5129-201ENSMUST00000174938 78 ntBASIC3.96□□□□□ -1.78
Usp40Q8BWR4 Gm26097-201ENSMUST00000179642 93 ntBASIC3.96□□□□□ -1.78
Usp40Q8BWR4 Mir6372-201ENSMUST00000185114 109 ntBASIC3.96□□□□□ -1.78
Usp40Q8BWR4 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC3.96□□□□□ -1.78
Usp40Q8BWR4 Gm34314-201ENSMUST00000203622 367 ntBASIC3.96□□□□□ -1.78
Usp40Q8BWR4 AC154213.2-201ENSMUST00000227138 187 ntBASIC3.96□□□□□ -1.78
Usp40Q8BWR4 Gm10025-201ENSMUST00000079568 372 ntBASIC3.96□□□□□ -1.78
Usp40Q8BWR4 Gm23517-201ENSMUST00000082830 192 ntBASIC3.96□□□□□ -1.78
Usp40Q8BWR4 Gm26314-201ENSMUST00000083891 107 ntBASIC3.96□□□□□ -1.78
Usp40Q8BWR4 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC3.96□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 148.5 ms