Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm18296-201ENSMUST00000192475 783 ntBASIC1.82□□□□□ -2.12
Ccdc40Q8BI79 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Ccdc40Q8BI79 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC1.82□□□□□ -2.12
Ccdc40Q8BI79 AC134334.1-201ENSMUST00000214277 255 ntBASIC1.82□□□□□ -2.12
Ccdc40Q8BI79 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.82□□□□□ -2.12
Ccdc40Q8BI79 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Ccdc40Q8BI79 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC1.82□□□□□ -2.12
Ccdc40Q8BI79 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Ccdc40Q8BI79 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
Ccdc40Q8BI79 Gm25421-201ENSMUST00000104218 164 ntBASIC1.81□□□□□ -2.12
Ccdc40Q8BI79 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC1.81□□□□□ -2.12
Ccdc40Q8BI79 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC1.81□□□□□ -2.12
Ccdc40Q8BI79 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC1.81□□□□□ -2.12
Ccdc40Q8BI79 Gm21737-201ENSMUST00000178112 664 ntBASIC1.81□□□□□ -2.12
Ccdc40Q8BI79 Gm21815-201ENSMUST00000178213 664 ntBASIC1.81□□□□□ -2.12
Ccdc40Q8BI79 Gm22166-201ENSMUST00000178419 121 ntBASIC1.81□□□□□ -2.12
Ccdc40Q8BI79 Gm23288-201ENSMUST00000179213 121 ntBASIC1.81□□□□□ -2.12
Ccdc40Q8BI79 Gm21729-201ENSMUST00000180058 664 ntBASIC1.81□□□□□ -2.12
Ccdc40Q8BI79 Gm21853-201ENSMUST00000180071 664 ntBASIC1.81□□□□□ -2.12
Ccdc40Q8BI79 Gm20901-201ENSMUST00000180177 664 ntBASIC1.81□□□□□ -2.12
Ccdc40Q8BI79 Gm29073-201ENSMUST00000185563 664 ntBASIC1.81□□□□□ -2.12
Ccdc40Q8BI79 Gm29640-201ENSMUST00000187972 278 ntBASIC1.81□□□□□ -2.12
Ccdc40Q8BI79 Gm29352-201ENSMUST00000188054 544 ntBASIC1.81□□□□□ -2.12
Ccdc40Q8BI79 Gm29350-201ENSMUST00000189141 541 ntBASIC1.81□□□□□ -2.12
Ccdc40Q8BI79 Gm29495-201ENSMUST00000189319 664 ntBASIC1.81□□□□□ -2.12
Ccdc40Q8BI79 Gm28151-201ENSMUST00000189404 951 ntBASIC1.81□□□□□ -2.12
Ccdc40Q8BI79 Gm28090-201ENSMUST00000189458 664 ntBASIC1.81□□□□□ -2.12
Ccdc40Q8BI79 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.81□□□□□ -2.12
Ccdc40Q8BI79 Gm21647-201ENSMUST00000189755 664 ntBASIC1.81□□□□□ -2.12
Ccdc40Q8BI79 Gm29165-201ENSMUST00000190655 664 ntBASIC1.81□□□□□ -2.12
Ccdc40Q8BI79 Gm29211-201ENSMUST00000191470 664 ntBASIC1.81□□□□□ -2.12
Ccdc40Q8BI79 Gm36891-201ENSMUST00000191995 655 ntBASIC1.81□□□□□ -2.12
Ccdc40Q8BI79 Gm44655-201ENSMUST00000207768 423 ntBASIC1.81□□□□□ -2.12
Ccdc40Q8BI79 Gm45365-201ENSMUST00000209489 256 ntBASIC1.81□□□□□ -2.12
Ccdc40Q8BI79 CT009718.4-201ENSMUST00000221881 109 ntBASIC1.81□□□□□ -2.12
Ccdc40Q8BI79 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.81□□□□□ -2.12
Ccdc40Q8BI79 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Ccdc40Q8BI79 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Ccdc40Q8BI79 Gm24172-201ENSMUST00000104127 117 ntBASIC1.8□□□□□ -2.12
Ccdc40Q8BI79 Gm24079-201ENSMUST00000104352 132 ntBASIC1.8□□□□□ -2.12
Ccdc40Q8BI79 Gm11854-201ENSMUST00000117839 446 ntBASIC1.8□□□□□ -2.12
Ccdc40Q8BI79 Gm26278-201ENSMUST00000157098 132 ntBASIC1.8□□□□□ -2.12
Ccdc40Q8BI79 Gm25054-201ENSMUST00000157370 97 ntBASIC1.8□□□□□ -2.12
Ccdc40Q8BI79 Gm27510-201ENSMUST00000158214 64 ntBASIC1.8□□□□□ -2.12
Ccdc40Q8BI79 Mir3103-201ENSMUST00000175474 67 ntBASIC1.8□□□□□ -2.12
Ccdc40Q8BI79 Gm37658-201ENSMUST00000192672 315 ntBASIC1.8□□□□□ -2.12
Ccdc40Q8BI79 Gm42857-201ENSMUST00000200823 339 ntBASIC1.8□□□□□ -2.12
Ccdc40Q8BI79 Gm44336-201ENSMUST00000203696 468 ntBASIC1.8□□□□□ -2.12
Ccdc40Q8BI79 AC122393.1-201ENSMUST00000226570 319 ntBASIC1.8□□□□□ -2.12
Ccdc40Q8BI79 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.8□□□□□ -2.12
Ccdc40Q8BI79 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Ccdc40Q8BI79 Gm22713-201ENSMUST00000116895 130 ntBASIC1.79□□□□□ -2.12
Ccdc40Q8BI79 Gm11407-201ENSMUST00000120362 1058 ntBASIC1.79□□□□□ -2.12
Ccdc40Q8BI79 Gm11389-201ENSMUST00000121407 430 ntBASIC1.79□□□□□ -2.12
Ccdc40Q8BI79 Gm24262-201ENSMUST00000157431 144 ntBASIC1.79□□□□□ -2.12
Ccdc40Q8BI79 Gm26149-201ENSMUST00000157432 108 ntBASIC1.79□□□□□ -2.12
Ccdc40Q8BI79 Gm24851-201ENSMUST00000158028 103 ntBASIC1.79□□□□□ -2.12
Ccdc40Q8BI79 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Ccdc40Q8BI79 Gm24084-201ENSMUST00000175173 137 ntBASIC1.79□□□□□ -2.12
Ccdc40Q8BI79 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.79□□□□□ -2.12
Ccdc40Q8BI79 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.79□□□□□ -2.12
Ccdc40Q8BI79 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Ccdc40Q8BI79 Mir6997-201ENSMUST00000184313 71 ntBASIC1.79□□□□□ -2.12
Ccdc40Q8BI79 Gm27385-201ENSMUST00000184747 104 ntBASIC1.79□□□□□ -2.12
Ccdc40Q8BI79 Mir7226-201ENSMUST00000184953 60 ntBASIC1.79□□□□□ -2.12
Ccdc40Q8BI79 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Ccdc40Q8BI79 Ighv1-46-201ENSMUST00000193988 351 ntBASIC1.79□□□□□ -2.12
Ccdc40Q8BI79 Gm18546-201ENSMUST00000197245 676 ntBASIC1.79□□□□□ -2.12
Ccdc40Q8BI79 Mir1291-201ENSMUST00000199842 117 ntBASIC1.79□□□□□ -2.12
Ccdc40Q8BI79 Gm44754-201ENSMUST00000208155 400 ntBASIC1.79□□□□□ -2.12
Ccdc40Q8BI79 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Ccdc40Q8BI79 Snora34-201ENSMUST00000083402 138 ntBASIC1.79□□□□□ -2.12
Ccdc40Q8BI79 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Ccdc40Q8BI79 Gm6956-201ENSMUST00000134724 546 ntBASIC1.78□□□□□ -2.12
Ccdc40Q8BI79 Gm24858-201ENSMUST00000158058 323 ntBASIC1.78□□□□□ -2.12
Ccdc40Q8BI79 Gm22510-201ENSMUST00000179304 79 ntBASIC1.78□□□□□ -2.12
Ccdc40Q8BI79 Gm26336-201ENSMUST00000179449 79 ntBASIC1.78□□□□□ -2.12
Ccdc40Q8BI79 Gm26390-201ENSMUST00000179628 79 ntBASIC1.78□□□□□ -2.12
Ccdc40Q8BI79 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC1.78□□□□□ -2.12
Ccdc40Q8BI79 AC153541.1-201ENSMUST00000213786 294 ntBASIC1.78□□□□□ -2.12
Ccdc40Q8BI79 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.78□□□□□ -2.12
Ccdc40Q8BI79 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.78□□□□□ -2.12
Ccdc40Q8BI79 CT025538.2-201ENSMUST00000226083 772 ntBASIC1.78□□□□□ -2.12
Ccdc40Q8BI79 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.78□□□□□ -2.12
Ccdc40Q8BI79 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Ccdc40Q8BI79 Mir669d-201ENSMUST00000104644 121 ntBASIC1.77□□□□□ -2.13
Ccdc40Q8BI79 Gm20438-201ENSMUST00000174441 329 ntBASIC1.77□□□□□ -2.13
Ccdc40Q8BI79 Gm23523-201ENSMUST00000180190 107 ntBASIC1.77□□□□□ -2.13
Ccdc40Q8BI79 Mir6388-201ENSMUST00000184417 75 ntBASIC1.77□□□□□ -2.13
Ccdc40Q8BI79 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.77□□□□□ -2.13
Ccdc40Q8BI79 Gm44337-201ENSMUST00000196553 114 ntBASIC1.77□□□□□ -2.13
Ccdc40Q8BI79 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.77□□□□□ -2.13
Ccdc40Q8BI79 Gm25896-201ENSMUST00000083713 136 ntBASIC1.77□□□□□ -2.13
Ccdc40Q8BI79 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Ccdc40Q8BI79 Gm24282-201ENSMUST00000104232 66 ntBASIC1.76□□□□□ -2.13
Ccdc40Q8BI79 Gm6444-201ENSMUST00000119611 458 ntBASIC1.76□□□□□ -2.13
Ccdc40Q8BI79 Gm6025-201ENSMUST00000121517 201 ntBASIC1.76□□□□□ -2.13
Ccdc40Q8BI79 Gm23212-201ENSMUST00000122718 60 ntBASIC1.76□□□□□ -2.13
Ccdc40Q8BI79 Gm16584-201ENSMUST00000159267 189 ntBASIC1.76□□□□□ -2.13
Ccdc40Q8BI79 Gm21754-201ENSMUST00000177550 479 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms