Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 n-R5s189-201ENSMUST00000122675 114 ntBASIC3.26□□□□□ -1.89
Pif1Q80SX8 Gm22984-201ENSMUST00000122751 122 ntBASIC3.26□□□□□ -1.89
Pif1Q80SX8 Gm22215-201ENSMUST00000157558 96 ntBASIC3.26□□□□□ -1.89
Pif1Q80SX8 Gm24138-201ENSMUST00000157572 114 ntBASIC3.26□□□□□ -1.89
Pif1Q80SX8 Gm22315-201ENSMUST00000158010 143 ntBASIC3.26□□□□□ -1.89
Pif1Q80SX8 Gm22537-201ENSMUST00000158172 199 ntBASIC3.26□□□□□ -1.89
Pif1Q80SX8 Gm35857-201ENSMUST00000212739 178 ntBASIC3.26□□□□□ -1.89
Pif1Q80SX8 AC239878.2-201ENSMUST00000224048 464 ntBASIC3.26□□□□□ -1.89
Pif1Q80SX8 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.26□□□□□ -1.89
Pif1Q80SX8 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.26□□□□□ -1.89
Pif1Q80SX8 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Pif1Q80SX8 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Pif1Q80SX8 Gm37096-201ENSMUST00000192317 2058 ntBASIC3.26□□□□□ -1.89
Pif1Q80SX8 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Pif1Q80SX8 Gm14811-201ENSMUST00000117070 117 ntBASIC3.25□□□□□ -1.89
Pif1Q80SX8 Gm6829-201ENSMUST00000119858 360 ntBASIC3.25□□□□□ -1.89
Pif1Q80SX8 Gm11786-201ENSMUST00000120799 155 ntBASIC3.25□□□□□ -1.89
Pif1Q80SX8 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
Pif1Q80SX8 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Pif1Q80SX8 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC3.25□□□□□ -1.89
Pif1Q80SX8 Gm28921-201ENSMUST00000190219 378 ntBASIC3.25□□□□□ -1.89
Pif1Q80SX8 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC3.25□□□□□ -1.89
Pif1Q80SX8 Gm43217-201ENSMUST00000199513 367 ntBASIC3.25□□□□□ -1.89
Pif1Q80SX8 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.25□□□□□ -1.89
Pif1Q80SX8 AC115735.2-201ENSMUST00000227135 351 ntBASIC3.25□□□□□ -1.89
Pif1Q80SX8 Gm24977-201ENSMUST00000083106 163 ntBASIC3.25□□□□□ -1.89
Pif1Q80SX8 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Pif1Q80SX8 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.25□□□□□ -1.89
Pif1Q80SX8 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Pif1Q80SX8 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Pif1Q80SX8 Gm22023-201ENSMUST00000104354 130 ntBASIC3.24□□□□□ -1.89
Pif1Q80SX8 Gm5762-201ENSMUST00000119204 258 ntBASIC3.24□□□□□ -1.89
Pif1Q80SX8 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.24□□□□□ -1.89
Pif1Q80SX8 Gm12412-201ENSMUST00000121867 328 ntBASIC3.24□□□□□ -1.89
Pif1Q80SX8 Gm25711-201ENSMUST00000158633 128 ntBASIC3.24□□□□□ -1.89
Pif1Q80SX8 Gm23047-201ENSMUST00000177661 94 ntBASIC3.24□□□□□ -1.89
Pif1Q80SX8 Gm27793-201ENSMUST00000183405 76 ntBASIC3.24□□□□□ -1.89
Pif1Q80SX8 Gm42621-201ENSMUST00000198114 275 ntBASIC3.24□□□□□ -1.89
Pif1Q80SX8 Gm20144-201ENSMUST00000203031 165 ntBASIC3.24□□□□□ -1.89
Pif1Q80SX8 Gm44182-201ENSMUST00000204052 115 ntBASIC3.24□□□□□ -1.89
Pif1Q80SX8 Gm44666-201ENSMUST00000208544 391 ntBASIC3.24□□□□□ -1.89
Pif1Q80SX8 AC125374.2-201ENSMUST00000214278 162 ntBASIC3.24□□□□□ -1.89
Pif1Q80SX8 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.24□□□□□ -1.89
Pif1Q80SX8 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Pif1Q80SX8 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Pif1Q80SX8 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
Pif1Q80SX8 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Pif1Q80SX8 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Pif1Q80SX8 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Pif1Q80SX8 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Pif1Q80SX8 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Pif1Q80SX8 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.23□□□□□ -1.89
Pif1Q80SX8 Gm9009-201ENSMUST00000117321 326 ntBASIC3.23□□□□□ -1.89
Pif1Q80SX8 Gm24896-201ENSMUST00000122741 135 ntBASIC3.23□□□□□ -1.89
Pif1Q80SX8 Gm2830-201ENSMUST00000140330 385 ntBASIC3.23□□□□□ -1.89
Pif1Q80SX8 Gm23982-201ENSMUST00000157141 106 ntBASIC3.23□□□□□ -1.89
Pif1Q80SX8 Gm23775-201ENSMUST00000158991 249 ntBASIC3.23□□□□□ -1.89
Pif1Q80SX8 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC3.23□□□□□ -1.89
Pif1Q80SX8 Mir1291-201ENSMUST00000199842 117 ntBASIC3.23□□□□□ -1.89
Pif1Q80SX8 Gm15235-201ENSMUST00000200572 194 ntBASIC3.23□□□□□ -1.89
Pif1Q80SX8 AC159709.1-201ENSMUST00000220445 349 ntBASIC3.23□□□□□ -1.89
Pif1Q80SX8 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.23□□□□□ -1.89
Pif1Q80SX8 Snora34-201ENSMUST00000083402 138 ntBASIC3.23□□□□□ -1.89
Pif1Q80SX8 Gm24164-201ENSMUST00000093663 104 ntBASIC3.23□□□□□ -1.89
Pif1Q80SX8 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC3.23□□□□□ -1.89
Pif1Q80SX8 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Pif1Q80SX8 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.22□□□□□ -1.89
Pif1Q80SX8 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.22□□□□□ -1.89
Pif1Q80SX8 Gm12417-201ENSMUST00000119153 403 ntBASIC3.22□□□□□ -1.89
Pif1Q80SX8 Gm23257-201ENSMUST00000158322 132 ntBASIC3.22□□□□□ -1.89
Pif1Q80SX8 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC3.22□□□□□ -1.89
Pif1Q80SX8 Mir6993-201ENSMUST00000184912 65 ntBASIC3.22□□□□□ -1.89
Pif1Q80SX8 Gm37479-201ENSMUST00000194169 3841 ntBASIC3.22□□□□□ -1.89
Pif1Q80SX8 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC3.22□□□□□ -1.89
Pif1Q80SX8 Mir376a-201ENSMUST00000197584 68 ntBASIC3.22□□□□□ -1.89
Pif1Q80SX8 Gm45543-201ENSMUST00000209327 88 ntBASIC3.22□□□□□ -1.89
Pif1Q80SX8 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC3.22□□□□□ -1.89
Pif1Q80SX8 Gm35405-201ENSMUST00000218754 400 ntBASIC3.22□□□□□ -1.89
Pif1Q80SX8 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.22□□□□□ -1.89
Pif1Q80SX8 AC154527.5-201ENSMUST00000224448 496 ntBASIC3.22□□□□□ -1.89
Pif1Q80SX8 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.22□□□□□ -1.89
Pif1Q80SX8 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.22□□□□□ -1.89
Pif1Q80SX8 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.22□□□□□ -1.89
Pif1Q80SX8 Gm26126-201ENSMUST00000083188 164 ntBASIC3.22□□□□□ -1.89
Pif1Q80SX8 Gm25789-201ENSMUST00000083294 76 ntBASIC3.22□□□□□ -1.89
Pif1Q80SX8 Gm22972-201ENSMUST00000083297 131 ntBASIC3.22□□□□□ -1.89
Pif1Q80SX8 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Pif1Q80SX8 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Pif1Q80SX8 AL645643.1-201ENSMUST00000222438 3897 ntBASIC3.22□□□□□ -1.89
Pif1Q80SX8 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.21□□□□□ -1.89
Pif1Q80SX8 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.21□□□□□ -1.9
Pif1Q80SX8 Gm26027-201ENSMUST00000122725 268 ntBASIC3.21□□□□□ -1.9
Pif1Q80SX8 Gm22535-201ENSMUST00000158174 119 ntBASIC3.21□□□□□ -1.9
Pif1Q80SX8 Gm25476-201ENSMUST00000175125 185 ntBASIC3.21□□□□□ -1.9
Pif1Q80SX8 Snord92-201ENSMUST00000175548 85 ntBASIC3.21□□□□□ -1.9
Pif1Q80SX8 Gm5829-201ENSMUST00000191383 351 ntBASIC3.21□□□□□ -1.9
Pif1Q80SX8 Gm42774-201ENSMUST00000198854 283 ntBASIC3.21□□□□□ -1.9
Pif1Q80SX8 AC165157.3-201ENSMUST00000220815 103 ntBASIC3.21□□□□□ -1.9
Pif1Q80SX8 CT033785.1-201ENSMUST00000224872 272 ntBASIC3.21□□□□□ -1.9
Pif1Q80SX8 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 146.2 ms