Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm24152-201ENSMUST00000082764 163 ntBASIC2.79□□□□□ -1.96
Ubfd1Q78JW9 Gm23738-201ENSMUST00000082828 171 ntBASIC2.79□□□□□ -1.96
Ubfd1Q78JW9 Gm25258-201ENSMUST00000083049 107 ntBASIC2.79□□□□□ -1.96
Ubfd1Q78JW9 Gm22154-201ENSMUST00000083844 131 ntBASIC2.79□□□□□ -1.96
Ubfd1Q78JW9 Gm23040-201ENSMUST00000083869 163 ntBASIC2.79□□□□□ -1.96
Ubfd1Q78JW9 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Ubfd1Q78JW9 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
Ubfd1Q78JW9 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Ubfd1Q78JW9 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Ubfd1Q78JW9 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.78□□□□□ -1.96
Ubfd1Q78JW9 Gm42639-201ENSMUST00000197061 1871 ntBASIC2.78□□□□□ -1.96
Ubfd1Q78JW9 Mir872-201ENSMUST00000104728 81 ntBASIC2.78□□□□□ -1.96
Ubfd1Q78JW9 Gm6954-201ENSMUST00000117416 225 ntBASIC2.78□□□□□ -1.96
Ubfd1Q78JW9 Gm5396-201ENSMUST00000121222 532 ntBASIC2.78□□□□□ -1.96
Ubfd1Q78JW9 Gm24629-201ENSMUST00000122762 89 ntBASIC2.78□□□□□ -1.96
Ubfd1Q78JW9 Gm24879-201ENSMUST00000158386 143 ntBASIC2.78□□□□□ -1.96
Ubfd1Q78JW9 Gm23474-201ENSMUST00000158884 75 ntBASIC2.78□□□□□ -1.96
Ubfd1Q78JW9 Mir3092-201ENSMUST00000174954 96 ntBASIC2.78□□□□□ -1.96
Ubfd1Q78JW9 Gm20660-201ENSMUST00000177515 289 ntBASIC2.78□□□□□ -1.96
Ubfd1Q78JW9 Gm25450-201ENSMUST00000179144 107 ntBASIC2.78□□□□□ -1.96
Ubfd1Q78JW9 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.78□□□□□ -1.96
Ubfd1Q78JW9 Gm34314-201ENSMUST00000203622 367 ntBASIC2.78□□□□□ -1.96
Ubfd1Q78JW9 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.78□□□□□ -1.96
Ubfd1Q78JW9 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.78□□□□□ -1.96
Ubfd1Q78JW9 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Ubfd1Q78JW9 Gm25141-201ENSMUST00000083177 107 ntBASIC2.78□□□□□ -1.96
Ubfd1Q78JW9 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.78□□□□□ -1.96
Ubfd1Q78JW9 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Ubfd1Q78JW9 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Ubfd1Q78JW9 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.78□□□□□ -1.96
Ubfd1Q78JW9 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
Ubfd1Q78JW9 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
Ubfd1Q78JW9 Gm38382-201ENSMUST00000193790 2499 ntBASIC2.77□□□□□ -1.97
Ubfd1Q78JW9 Gm25466-201ENSMUST00000103995 132 ntBASIC2.77□□□□□ -1.97
Ubfd1Q78JW9 Gm12954-201ENSMUST00000118610 611 ntBASIC2.77□□□□□ -1.97
Ubfd1Q78JW9 Gm15272-201ENSMUST00000120865 233 ntBASIC2.77□□□□□ -1.97
Ubfd1Q78JW9 Gm15213-201ENSMUST00000122098 216 ntBASIC2.77□□□□□ -1.97
Ubfd1Q78JW9 Gm24892-201ENSMUST00000122747 104 ntBASIC2.77□□□□□ -1.97
Ubfd1Q78JW9 Gm25280-201ENSMUST00000157269 101 ntBASIC2.77□□□□□ -1.97
Ubfd1Q78JW9 Gm24911-201ENSMUST00000157292 136 ntBASIC2.77□□□□□ -1.97
Ubfd1Q78JW9 Gm24858-201ENSMUST00000158058 323 ntBASIC2.77□□□□□ -1.97
Ubfd1Q78JW9 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.77□□□□□ -1.97
Ubfd1Q78JW9 Gm24388-201ENSMUST00000177872 107 ntBASIC2.77□□□□□ -1.97
Ubfd1Q78JW9 Gm27379-201ENSMUST00000183730 123 ntBASIC2.77□□□□□ -1.97
Ubfd1Q78JW9 Gm18357-201ENSMUST00000188184 580 ntBASIC2.77□□□□□ -1.97
Ubfd1Q78JW9 Gm37037-201ENSMUST00000194475 424 ntBASIC2.77□□□□□ -1.97
Ubfd1Q78JW9 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.77□□□□□ -1.97
Ubfd1Q78JW9 Gm44055-201ENSMUST00000204376 247 ntBASIC2.77□□□□□ -1.97
Ubfd1Q78JW9 Gm44526-201ENSMUST00000204664 121 ntBASIC2.77□□□□□ -1.97
Ubfd1Q78JW9 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC2.77□□□□□ -1.97
Ubfd1Q78JW9 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Ubfd1Q78JW9 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Ubfd1Q78JW9 Gm25078-201ENSMUST00000082530 107 ntBASIC2.77□□□□□ -1.97
Ubfd1Q78JW9 Gm23462-201ENSMUST00000083264 104 ntBASIC2.77□□□□□ -1.97
Ubfd1Q78JW9 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC2.77□□□□□ -1.97
Ubfd1Q78JW9 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
Ubfd1Q78JW9 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
Ubfd1Q78JW9 Mir499-201ENSMUST00000102357 79 ntBASIC2.76□□□□□ -1.97
Ubfd1Q78JW9 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Ubfd1Q78JW9 Mdga2-203ENSMUST00000113942 423 ntBASIC2.76□□□□□ -1.97
Ubfd1Q78JW9 Gm11572-201ENSMUST00000119164 120 ntBASIC2.76□□□□□ -1.97
Ubfd1Q78JW9 Gm12213-201ENSMUST00000119924 353 ntBASIC2.76□□□□□ -1.97
Ubfd1Q78JW9 Gm13967-201ENSMUST00000120404 380 ntBASIC2.76□□□□□ -1.97
Ubfd1Q78JW9 DQ267100-201ENSMUST00000122600 72 ntBASIC2.76□□□□□ -1.97
Ubfd1Q78JW9 Gm26099-201ENSMUST00000157248 109 ntBASIC2.76□□□□□ -1.97
Ubfd1Q78JW9 Gm24691-201ENSMUST00000157762 140 ntBASIC2.76□□□□□ -1.97
Ubfd1Q78JW9 Gm22961-201ENSMUST00000157964 106 ntBASIC2.76□□□□□ -1.97
Ubfd1Q78JW9 Mir7242-201ENSMUST00000183710 79 ntBASIC2.76□□□□□ -1.97
Ubfd1Q78JW9 Gm27796-201ENSMUST00000183863 261 ntBASIC2.76□□□□□ -1.97
Ubfd1Q78JW9 Gm27521-201ENSMUST00000184022 64 ntBASIC2.76□□□□□ -1.97
Ubfd1Q78JW9 Gm27761-201ENSMUST00000184091 131 ntBASIC2.76□□□□□ -1.97
Ubfd1Q78JW9 Gm44409-201ENSMUST00000198810 166 ntBASIC2.76□□□□□ -1.97
Ubfd1Q78JW9 Gm46233-201ENSMUST00000217831 449 ntBASIC2.76□□□□□ -1.97
Ubfd1Q78JW9 Gm10025-201ENSMUST00000079568 372 ntBASIC2.76□□□□□ -1.97
Ubfd1Q78JW9 Gm22062-201ENSMUST00000082563 107 ntBASIC2.76□□□□□ -1.97
Ubfd1Q78JW9 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Ubfd1Q78JW9 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.76□□□□□ -1.97
Ubfd1Q78JW9 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
Ubfd1Q78JW9 Snord14c-201ENSMUST00000101927 86 ntBASIC2.75□□□□□ -1.97
Ubfd1Q78JW9 Gm25500-201ENSMUST00000104426 123 ntBASIC2.75□□□□□ -1.97
Ubfd1Q78JW9 Gm11904-201ENSMUST00000120562 248 ntBASIC2.75□□□□□ -1.97
Ubfd1Q78JW9 Gm13581-201ENSMUST00000120675 278 ntBASIC2.75□□□□□ -1.97
Ubfd1Q78JW9 Gm25625-201ENSMUST00000157221 96 ntBASIC2.75□□□□□ -1.97
Ubfd1Q78JW9 Gm26200-201ENSMUST00000180273 79 ntBASIC2.75□□□□□ -1.97
Ubfd1Q78JW9 Mir6399-201ENSMUST00000184050 84 ntBASIC2.75□□□□□ -1.97
Ubfd1Q78JW9 Mir6375-201ENSMUST00000197176 95 ntBASIC2.75□□□□□ -1.97
Ubfd1Q78JW9 Gm44429-201ENSMUST00000203542 186 ntBASIC2.75□□□□□ -1.97
Ubfd1Q78JW9 Gm45313-201ENSMUST00000210584 178 ntBASIC2.75□□□□□ -1.97
Ubfd1Q78JW9 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.75□□□□□ -1.97
Ubfd1Q78JW9 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Ubfd1Q78JW9 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.75□□□□□ -1.97
Ubfd1Q78JW9 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.75□□□□□ -1.97
Ubfd1Q78JW9 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Ubfd1Q78JW9 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Ubfd1Q78JW9 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Ubfd1Q78JW9 Mir669g-201ENSMUST00000116809 123 ntBASIC2.74□□□□□ -1.97
Ubfd1Q78JW9 Gm26156-201ENSMUST00000116999 123 ntBASIC2.74□□□□□ -1.97
Ubfd1Q78JW9 Gm24443-201ENSMUST00000157242 132 ntBASIC2.74□□□□□ -1.97
Ubfd1Q78JW9 Gm26214-201ENSMUST00000158581 107 ntBASIC2.74□□□□□ -1.97
Ubfd1Q78JW9 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 134.7 ms