Protein–RNA interactions for Protein: Q6ZQF0

Topbp1, DNA topoisomerase 2-binding protein 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1Q6ZQF0 Gm23102-201ENSMUST00000083724 116 ntBASIC0.49□□□□□ -2.33
Topbp1Q6ZQF0 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
Topbp1Q6ZQF0 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
Topbp1Q6ZQF0 Gm14716-201ENSMUST00000120138 718 ntBASIC0.48□□□□□ -2.33
Topbp1Q6ZQF0 Gm12591-201ENSMUST00000122407 1177 ntBASIC0.48□□□□□ -2.33
Topbp1Q6ZQF0 Gm43583-201ENSMUST00000199235 303 ntBASIC0.48□□□□□ -2.33
Topbp1Q6ZQF0 Gm45530-201ENSMUST00000211658 225 ntBASIC0.48□□□□□ -2.33
Topbp1Q6ZQF0 AC159476.2-201ENSMUST00000216221 418 ntBASIC0.48□□□□□ -2.33
Topbp1Q6ZQF0 Gm40810-201ENSMUST00000219149 253 ntBASIC0.48□□□□□ -2.33
Topbp1Q6ZQF0 AC158142.3-201ENSMUST00000226230 675 ntBASIC0.48□□□□□ -2.33
Topbp1Q6ZQF0 AC112935.1-201ENSMUST00000227603 250 ntBASIC0.48□□□□□ -2.33
Topbp1Q6ZQF0 Gm25257-201ENSMUST00000083907 110 ntBASIC0.48□□□□□ -2.33
Topbp1Q6ZQF0 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
Topbp1Q6ZQF0 Gm25110-201ENSMUST00000116684 121 ntBASIC0.48□□□□□ -2.33
Topbp1Q6ZQF0 Gm25775-201ENSMUST00000116716 121 ntBASIC0.48□□□□□ -2.33
Topbp1Q6ZQF0 Gm24795-201ENSMUST00000116737 121 ntBASIC0.48□□□□□ -2.33
Topbp1Q6ZQF0 Gm25171-201ENSMUST00000116926 121 ntBASIC0.48□□□□□ -2.33
Topbp1Q6ZQF0 Gm22452-201ENSMUST00000122804 104 ntBASIC0.48□□□□□ -2.33
Topbp1Q6ZQF0 Gm27396-201ENSMUST00000157708 58 ntBASIC0.48□□□□□ -2.33
Topbp1Q6ZQF0 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC0.48□□□□□ -2.33
Topbp1Q6ZQF0 Gm37568-201ENSMUST00000191755 364 ntBASIC0.48□□□□□ -2.33
Topbp1Q6ZQF0 Gm37102-201ENSMUST00000195740 1105 ntBASIC0.48□□□□□ -2.33
Topbp1Q6ZQF0 Gm44254-201ENSMUST00000204184 322 ntBASIC0.48□□□□□ -2.33
Topbp1Q6ZQF0 Gm26328-201ENSMUST00000082821 107 ntBASIC0.48□□□□□ -2.33
Topbp1Q6ZQF0 Gm25794-201ENSMUST00000083286 107 ntBASIC0.48□□□□□ -2.33
Topbp1Q6ZQF0 Olfr575-201ENSMUST00000084812 957 ntBASIC0.48□□□□□ -2.33
Topbp1Q6ZQF0 Gm22678-201ENSMUST00000116974 101 ntBASIC0.47□□□□□ -2.33
Topbp1Q6ZQF0 Anp32-ps-201ENSMUST00000118265 388 ntBASIC0.47□□□□□ -2.33
Topbp1Q6ZQF0 Gm13087-201ENSMUST00000118298 256 ntBASIC0.47□□□□□ -2.33
Topbp1Q6ZQF0 Gm14884-201ENSMUST00000120456 196 ntBASIC0.47□□□□□ -2.33
Topbp1Q6ZQF0 Gm24854-201ENSMUST00000158025 98 ntBASIC0.47□□□□□ -2.33
Topbp1Q6ZQF0 Gm22693-201ENSMUST00000175049 442 ntBASIC0.47□□□□□ -2.33
Topbp1Q6ZQF0 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
Topbp1Q6ZQF0 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
Topbp1Q6ZQF0 Gm29647-201ENSMUST00000188795 666 ntBASIC0.47□□□□□ -2.33
Topbp1Q6ZQF0 Gm28504-201ENSMUST00000190977 666 ntBASIC0.47□□□□□ -2.33
Topbp1Q6ZQF0 Gm42570-201ENSMUST00000195937 292 ntBASIC0.47□□□□□ -2.33
Topbp1Q6ZQF0 Mir3068-202ENSMUST00000197755 79 ntBASIC0.47□□□□□ -2.33
Topbp1Q6ZQF0 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC0.47□□□□□ -2.33
Topbp1Q6ZQF0 Gm23836-201ENSMUST00000104434 129 ntBASIC0.46□□□□□ -2.34
Topbp1Q6ZQF0 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.46□□□□□ -2.34
Topbp1Q6ZQF0 Gm24851-201ENSMUST00000158028 103 ntBASIC0.46□□□□□ -2.34
Topbp1Q6ZQF0 Gm25012-201ENSMUST00000158396 164 ntBASIC0.46□□□□□ -2.34
Topbp1Q6ZQF0 Atp2b4-208ENSMUST00000167348 243 ntBASIC0.46□□□□□ -2.34
Topbp1Q6ZQF0 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC0.46□□□□□ -2.34
Topbp1Q6ZQF0 Gm16404-201ENSMUST00000177739 468 ntBASIC0.46□□□□□ -2.34
Topbp1Q6ZQF0 Gm7958-201ENSMUST00000178255 468 ntBASIC0.46□□□□□ -2.34
Topbp1Q6ZQF0 Gm21758-201ENSMUST00000179336 819 ntBASIC0.46□□□□□ -2.34
Topbp1Q6ZQF0 Gm7950-201ENSMUST00000179633 468 ntBASIC0.46□□□□□ -2.34
Topbp1Q6ZQF0 Gm21978-201ENSMUST00000179696 377 ntBASIC0.46□□□□□ -2.34
Topbp1Q6ZQF0 Gm22633-201ENSMUST00000179834 107 ntBASIC0.46□□□□□ -2.34
Topbp1Q6ZQF0 Gm14598-201ENSMUST00000180109 468 ntBASIC0.46□□□□□ -2.34
Topbp1Q6ZQF0 Gm14625-201ENSMUST00000180231 468 ntBASIC0.46□□□□□ -2.34
Topbp1Q6ZQF0 Gm28688-201ENSMUST00000187301 268 ntBASIC0.46□□□□□ -2.34
Topbp1Q6ZQF0 Gm28241-201ENSMUST00000190916 235 ntBASIC0.46□□□□□ -2.34
Topbp1Q6ZQF0 Gm28408-201ENSMUST00000191557 463 ntBASIC0.46□□□□□ -2.34
Topbp1Q6ZQF0 Gm36966-201ENSMUST00000192217 413 ntBASIC0.46□□□□□ -2.34
Topbp1Q6ZQF0 Gm35843-201ENSMUST00000193716 666 ntBASIC0.46□□□□□ -2.34
Topbp1Q6ZQF0 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC0.46□□□□□ -2.34
Topbp1Q6ZQF0 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
Topbp1Q6ZQF0 Gm3563-201ENSMUST00000172963 1628 ntBASIC0.46□□□□□ -2.34
Topbp1Q6ZQF0 Gm14445-201ENSMUST00000117051 1484 ntBASIC0.46□□□□□ -2.34
Topbp1Q6ZQF0 Gm42721-201ENSMUST00000197165 1523 ntBASIC0.45□□□□□ -2.34
Topbp1Q6ZQF0 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
Topbp1Q6ZQF0 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC0.45□□□□□ -2.34
Topbp1Q6ZQF0 Gm14364-201ENSMUST00000129209 267 ntBASIC0.45□□□□□ -2.34
Topbp1Q6ZQF0 Igkv17-134-201ENSMUST00000168310 348 ntBASIC0.45□□□□□ -2.34
Topbp1Q6ZQF0 Gm17100-201ENSMUST00000168963 272 ntBASIC0.45□□□□□ -2.34
Topbp1Q6ZQF0 Mir6388-201ENSMUST00000184417 75 ntBASIC0.45□□□□□ -2.34
Topbp1Q6ZQF0 Gm28995-201ENSMUST00000186625 261 ntBASIC0.45□□□□□ -2.34
Topbp1Q6ZQF0 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC0.45□□□□□ -2.34
Topbp1Q6ZQF0 Gm44300-201ENSMUST00000196792 121 ntBASIC0.45□□□□□ -2.34
Topbp1Q6ZQF0 Gm44211-201ENSMUST00000204867 145 ntBASIC0.45□□□□□ -2.34
Topbp1Q6ZQF0 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC0.45□□□□□ -2.34
Topbp1Q6ZQF0 Gm19885-201ENSMUST00000212853 343 ntBASIC0.45□□□□□ -2.34
Topbp1Q6ZQF0 CT030184.1-201ENSMUST00000222393 416 ntBASIC0.45□□□□□ -2.34
Topbp1Q6ZQF0 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
Topbp1Q6ZQF0 Gm37361-201ENSMUST00000194345 132 ntBASIC0.44□□□□□ -2.34
Topbp1Q6ZQF0 Gm45247-201ENSMUST00000210757 309 ntBASIC0.44□□□□□ -2.34
Topbp1Q6ZQF0 Gm45907-201ENSMUST00000213023 193 ntBASIC0.44□□□□□ -2.34
Topbp1Q6ZQF0 Gm23628-201ENSMUST00000082464 173 ntBASIC0.44□□□□□ -2.34
Topbp1Q6ZQF0 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC0.44□□□□□ -2.34
Topbp1Q6ZQF0 Gm43706-201ENSMUST00000198767 2652 ntBASIC0.44□□□□□ -2.34
Topbp1Q6ZQF0 Gm25933-201ENSMUST00000178943 108 ntBASIC0.43□□□□□ -2.34
Topbp1Q6ZQF0 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC0.43□□□□□ -2.34
Topbp1Q6ZQF0 Gm38154-201ENSMUST00000195444 340 ntBASIC0.43□□□□□ -2.34
Topbp1Q6ZQF0 Gm45439-201ENSMUST00000211723 359 ntBASIC0.43□□□□□ -2.34
Topbp1Q6ZQF0 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.43□□□□□ -2.34
Topbp1Q6ZQF0 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC0.43□□□□□ -2.34
Topbp1Q6ZQF0 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.43□□□□□ -2.34
Topbp1Q6ZQF0 AC126691.1-201ENSMUST00000226534 202 ntBASIC0.43□□□□□ -2.34
Topbp1Q6ZQF0 Gm22061-201ENSMUST00000082557 107 ntBASIC0.43□□□□□ -2.34
Topbp1Q6ZQF0 Gm38388-201ENSMUST00000195569 1430 ntBASIC0.43□□□□□ -2.34
Topbp1Q6ZQF0 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC0.43□□□□□ -2.34
Topbp1Q6ZQF0 Gm23203-201ENSMUST00000104374 107 ntBASIC0.43□□□□□ -2.34
Topbp1Q6ZQF0 Gm7429-201ENSMUST00000118664 348 ntBASIC0.43□□□□□ -2.34
Topbp1Q6ZQF0 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC0.43□□□□□ -2.34
Topbp1Q6ZQF0 Gm26152-201ENSMUST00000157427 101 ntBASIC0.43□□□□□ -2.34
Topbp1Q6ZQF0 Gm23036-201ENSMUST00000157885 99 ntBASIC0.43□□□□□ -2.34
Topbp1Q6ZQF0 Gm17052-201ENSMUST00000165496 289 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms