Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.73□□□□□ -1.97
Smarca1Q6PGB8 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.73□□□□□ -1.97
Smarca1Q6PGB8 Gm23041-201ENSMUST00000083868 106 ntBASIC2.73□□□□□ -1.97
Smarca1Q6PGB8 Gm24698-201ENSMUST00000083883 130 ntBASIC2.73□□□□□ -1.97
Smarca1Q6PGB8 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.73□□□□□ -1.97
Smarca1Q6PGB8 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
Smarca1Q6PGB8 Gm13439-201ENSMUST00000117541 409 ntBASIC2.72□□□□□ -1.97
Smarca1Q6PGB8 Gm14774-201ENSMUST00000117857 536 ntBASIC2.72□□□□□ -1.97
Smarca1Q6PGB8 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC2.72□□□□□ -1.97
Smarca1Q6PGB8 Gm25625-201ENSMUST00000157221 96 ntBASIC2.72□□□□□ -1.97
Smarca1Q6PGB8 Gm23120-201ENSMUST00000157654 287 ntBASIC2.72□□□□□ -1.97
Smarca1Q6PGB8 Gm3852-201ENSMUST00000182781 264 ntBASIC2.72□□□□□ -1.97
Smarca1Q6PGB8 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC2.72□□□□□ -1.97
Smarca1Q6PGB8 Gm44811-201ENSMUST00000209120 228 ntBASIC2.72□□□□□ -1.97
Smarca1Q6PGB8 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC2.72□□□□□ -1.97
Smarca1Q6PGB8 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
Smarca1Q6PGB8 mt-Tr-201ENSMUST00000082412 68 ntBASIC2.72□□□□□ -1.97
Smarca1Q6PGB8 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.72□□□□□ -1.97
Smarca1Q6PGB8 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Smarca1Q6PGB8 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Smarca1Q6PGB8 Gm42755-201ENSMUST00000198533 1493 ntBASIC2.71□□□□□ -1.97
Smarca1Q6PGB8 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Smarca1Q6PGB8 Gm26015-201ENSMUST00000104402 125 ntBASIC2.71□□□□□ -1.98
Smarca1Q6PGB8 Mdga2-203ENSMUST00000113942 423 ntBASIC2.71□□□□□ -1.98
Smarca1Q6PGB8 Gm26473-201ENSMUST00000116763 127 ntBASIC2.71□□□□□ -1.98
Smarca1Q6PGB8 Gm5396-201ENSMUST00000121222 532 ntBASIC2.71□□□□□ -1.98
Smarca1Q6PGB8 Gm23867-201ENSMUST00000122649 274 ntBASIC2.71□□□□□ -1.98
Smarca1Q6PGB8 Gm17100-201ENSMUST00000168963 272 ntBASIC2.71□□□□□ -1.98
Smarca1Q6PGB8 Gm24813-201ENSMUST00000175310 84 ntBASIC2.71□□□□□ -1.98
Smarca1Q6PGB8 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC2.71□□□□□ -1.98
Smarca1Q6PGB8 Gm25671-201ENSMUST00000178612 105 ntBASIC2.71□□□□□ -1.98
Smarca1Q6PGB8 Gm23307-201ENSMUST00000179167 105 ntBASIC2.71□□□□□ -1.98
Smarca1Q6PGB8 Gm25286-201ENSMUST00000179790 105 ntBASIC2.71□□□□□ -1.98
Smarca1Q6PGB8 Gm37313-201ENSMUST00000191673 290 ntBASIC2.71□□□□□ -1.98
Smarca1Q6PGB8 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.71□□□□□ -1.98
Smarca1Q6PGB8 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.71□□□□□ -1.98
Smarca1Q6PGB8 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
Smarca1Q6PGB8 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.7□□□□□ -1.98
Smarca1Q6PGB8 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Smarca1Q6PGB8 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Smarca1Q6PGB8 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Smarca1Q6PGB8 Gm22151-201ENSMUST00000116963 58 ntBASIC2.7□□□□□ -1.98
Smarca1Q6PGB8 Gm13756-201ENSMUST00000117618 222 ntBASIC2.7□□□□□ -1.98
Smarca1Q6PGB8 Gm12646-201ENSMUST00000119144 238 ntBASIC2.7□□□□□ -1.98
Smarca1Q6PGB8 Gm23889-201ENSMUST00000122689 104 ntBASIC2.7□□□□□ -1.98
Smarca1Q6PGB8 Gm24892-201ENSMUST00000122747 104 ntBASIC2.7□□□□□ -1.98
Smarca1Q6PGB8 Gm22491-201ENSMUST00000157190 102 ntBASIC2.7□□□□□ -1.98
Smarca1Q6PGB8 Gm24212-201ENSMUST00000158258 132 ntBASIC2.7□□□□□ -1.98
Smarca1Q6PGB8 Gm24210-201ENSMUST00000158263 133 ntBASIC2.7□□□□□ -1.98
Smarca1Q6PGB8 Gm26406-201ENSMUST00000158503 124 ntBASIC2.7□□□□□ -1.98
Smarca1Q6PGB8 Gm26914-201ENSMUST00000182262 223 ntBASIC2.7□□□□□ -1.98
Smarca1Q6PGB8 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Smarca1Q6PGB8 Gm43914-201ENSMUST00000203592 594 ntBASIC2.7□□□□□ -1.98
Smarca1Q6PGB8 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.7□□□□□ -1.98
Smarca1Q6PGB8 AC116589.4-201ENSMUST00000222390 216 ntBASIC2.7□□□□□ -1.98
Smarca1Q6PGB8 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.7□□□□□ -1.98
Smarca1Q6PGB8 AC133156.1-202ENSMUST00000227284 363 ntBASIC2.7□□□□□ -1.98
Smarca1Q6PGB8 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Smarca1Q6PGB8 Gm26314-201ENSMUST00000083891 107 ntBASIC2.7□□□□□ -1.98
Smarca1Q6PGB8 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Smarca1Q6PGB8 Gm24275-201ENSMUST00000116780 146 ntBASIC2.69□□□□□ -1.98
Smarca1Q6PGB8 Mir669d-2-201ENSMUST00000116854 86 ntBASIC2.69□□□□□ -1.98
Smarca1Q6PGB8 Gm22316-201ENSMUST00000158012 216 ntBASIC2.69□□□□□ -1.98
Smarca1Q6PGB8 Gm24726-201ENSMUST00000158232 121 ntBASIC2.69□□□□□ -1.98
Smarca1Q6PGB8 Gm24771-201ENSMUST00000158508 137 ntBASIC2.69□□□□□ -1.98
Smarca1Q6PGB8 Gm24737-201ENSMUST00000158861 100 ntBASIC2.69□□□□□ -1.98
Smarca1Q6PGB8 Gm27220-201ENSMUST00000183453 262 ntBASIC2.69□□□□□ -1.98
Smarca1Q6PGB8 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Smarca1Q6PGB8 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC2.69□□□□□ -1.98
Smarca1Q6PGB8 Gm28627-201ENSMUST00000186141 453 ntBASIC2.69□□□□□ -1.98
Smarca1Q6PGB8 Gm32033-201ENSMUST00000193483 339 ntBASIC2.69□□□□□ -1.98
Smarca1Q6PGB8 Trbv6-201ENSMUST00000193743 276 ntBASIC2.69□□□□□ -1.98
Smarca1Q6PGB8 Gm2829-201ENSMUST00000213121 499 ntBASIC2.69□□□□□ -1.98
Smarca1Q6PGB8 AC122905.2-201ENSMUST00000220325 269 ntBASIC2.69□□□□□ -1.98
Smarca1Q6PGB8 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.69□□□□□ -1.98
Smarca1Q6PGB8 AC130829.3-201ENSMUST00000222735 154 ntBASIC2.69□□□□□ -1.98
Smarca1Q6PGB8 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2.69□□□□□ -1.98
Smarca1Q6PGB8 AC122393.1-201ENSMUST00000226570 319 ntBASIC2.69□□□□□ -1.98
Smarca1Q6PGB8 Snord68-201ENSMUST00000082516 86 ntBASIC2.69□□□□□ -1.98
Smarca1Q6PGB8 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
Smarca1Q6PGB8 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
Smarca1Q6PGB8 Gm22678-201ENSMUST00000116974 101 ntBASIC2.68□□□□□ -1.98
Smarca1Q6PGB8 Gm14624-201ENSMUST00000117746 192 ntBASIC2.68□□□□□ -1.98
Smarca1Q6PGB8 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.68□□□□□ -1.98
Smarca1Q6PGB8 Gm26255-201ENSMUST00000122492 103 ntBASIC2.68□□□□□ -1.98
Smarca1Q6PGB8 Gm26400-201ENSMUST00000175012 85 ntBASIC2.68□□□□□ -1.98
Smarca1Q6PGB8 Mir6386-201ENSMUST00000183558 104 ntBASIC2.68□□□□□ -1.98
Smarca1Q6PGB8 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Smarca1Q6PGB8 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Smarca1Q6PGB8 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.68□□□□□ -1.98
Smarca1Q6PGB8 AC147240.1-201ENSMUST00000218767 431 ntBASIC2.68□□□□□ -1.98
Smarca1Q6PGB8 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Smarca1Q6PGB8 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Smarca1Q6PGB8 Gm22062-201ENSMUST00000082563 107 ntBASIC2.68□□□□□ -1.98
Smarca1Q6PGB8 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Smarca1Q6PGB8 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Smarca1Q6PGB8 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.68□□□□□ -1.98
Smarca1Q6PGB8 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
Smarca1Q6PGB8 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.67□□□□□ -1.98
Smarca1Q6PGB8 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 105.2 ms