Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Snrnp40Q6PE01 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.2□□□□□ -2.06
Snrnp40Q6PE01 Snord14c-201ENSMUST00000101927 86 ntBASIC2.2□□□□□ -2.06
Snrnp40Q6PE01 Gm13457-201ENSMUST00000117885 267 ntBASIC2.2□□□□□ -2.06
Snrnp40Q6PE01 Gm12304-201ENSMUST00000120312 385 ntBASIC2.2□□□□□ -2.06
Snrnp40Q6PE01 Gm14215-201ENSMUST00000120578 221 ntBASIC2.2□□□□□ -2.06
Snrnp40Q6PE01 Gm12956-201ENSMUST00000122184 414 ntBASIC2.2□□□□□ -2.06
Snrnp40Q6PE01 Gm22085-201ENSMUST00000158344 110 ntBASIC2.2□□□□□ -2.06
Snrnp40Q6PE01 Gm25470-201ENSMUST00000175576 111 ntBASIC2.2□□□□□ -2.06
Snrnp40Q6PE01 Gm27905-201ENSMUST00000184005 207 ntBASIC2.2□□□□□ -2.06
Snrnp40Q6PE01 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC2.2□□□□□ -2.06
Snrnp40Q6PE01 Gm37404-201ENSMUST00000195726 359 ntBASIC2.2□□□□□ -2.06
Snrnp40Q6PE01 Gm45704-201ENSMUST00000212582 403 ntBASIC2.2□□□□□ -2.06
Snrnp40Q6PE01 Gm22806-201ENSMUST00000082738 136 ntBASIC2.2□□□□□ -2.06
Snrnp40Q6PE01 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.2□□□□□ -2.06
Snrnp40Q6PE01 Gm22353-201ENSMUST00000083918 136 ntBASIC2.2□□□□□ -2.06
Snrnp40Q6PE01 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Snrnp40Q6PE01 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Snrnp40Q6PE01 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Snrnp40Q6PE01 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.2□□□□□ -2.06
Snrnp40Q6PE01 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Snrnp40Q6PE01 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.2□□□□□ -2.06
Snrnp40Q6PE01 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.19□□□□□ -2.06
Snrnp40Q6PE01 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.19□□□□□ -2.06
Snrnp40Q6PE01 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Snrnp40Q6PE01 Gm22073-201ENSMUST00000122668 189 ntBASIC2.19□□□□□ -2.06
Snrnp40Q6PE01 Gm27926-201ENSMUST00000157180 66 ntBASIC2.19□□□□□ -2.06
Snrnp40Q6PE01 Gm23381-201ENSMUST00000157676 94 ntBASIC2.19□□□□□ -2.06
Snrnp40Q6PE01 Gm22517-201ENSMUST00000158265 136 ntBASIC2.19□□□□□ -2.06
Snrnp40Q6PE01 Gm23005-201ENSMUST00000158950 136 ntBASIC2.19□□□□□ -2.06
Snrnp40Q6PE01 Gm25671-201ENSMUST00000178612 105 ntBASIC2.19□□□□□ -2.06
Snrnp40Q6PE01 Gm23307-201ENSMUST00000179167 105 ntBASIC2.19□□□□□ -2.06
Snrnp40Q6PE01 Gm23793-201ENSMUST00000179396 117 ntBASIC2.19□□□□□ -2.06
Snrnp40Q6PE01 Gm25286-201ENSMUST00000179790 105 ntBASIC2.19□□□□□ -2.06
Snrnp40Q6PE01 Mir8103-201ENSMUST00000183945 107 ntBASIC2.19□□□□□ -2.06
Snrnp40Q6PE01 Trav5d-2-201ENSMUST00000196107 275 ntBASIC2.19□□□□□ -2.06
Snrnp40Q6PE01 Trav5n-2-201ENSMUST00000197136 275 ntBASIC2.19□□□□□ -2.06
Snrnp40Q6PE01 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.19□□□□□ -2.06
Snrnp40Q6PE01 Trav15n-3-201ENSMUST00000200498 168 ntBASIC2.19□□□□□ -2.06
Snrnp40Q6PE01 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.19□□□□□ -2.06
Snrnp40Q6PE01 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.19□□□□□ -2.06
Snrnp40Q6PE01 Gm18453-201ENSMUST00000208000 626 ntBASIC2.19□□□□□ -2.06
Snrnp40Q6PE01 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.19□□□□□ -2.06
Snrnp40Q6PE01 Gm44654-201ENSMUST00000208052 329 ntBASIC2.19□□□□□ -2.06
Snrnp40Q6PE01 Gm45678-201ENSMUST00000210509 295 ntBASIC2.19□□□□□ -2.06
Snrnp40Q6PE01 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.19□□□□□ -2.06
Snrnp40Q6PE01 Gm40810-201ENSMUST00000219149 253 ntBASIC2.19□□□□□ -2.06
Snrnp40Q6PE01 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC2.19□□□□□ -2.06
Snrnp40Q6PE01 Gm6109-201ENSMUST00000223297 348 ntBASIC2.19□□□□□ -2.06
Snrnp40Q6PE01 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.19□□□□□ -2.06
Snrnp40Q6PE01 Gm22866-201ENSMUST00000083947 177 ntBASIC2.19□□□□□ -2.06
Snrnp40Q6PE01 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Snrnp40Q6PE01 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Snrnp40Q6PE01 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Snrnp40Q6PE01 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Snrnp40Q6PE01 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Snrnp40Q6PE01 Gm13588-201ENSMUST00000120026 135 ntBASIC2.18□□□□□ -2.06
Snrnp40Q6PE01 Gm22491-201ENSMUST00000157190 102 ntBASIC2.18□□□□□ -2.06
Snrnp40Q6PE01 Snord11-201ENSMUST00000158468 84 ntBASIC2.18□□□□□ -2.06
Snrnp40Q6PE01 Gm26402-201ENSMUST00000158499 113 ntBASIC2.18□□□□□ -2.06
Snrnp40Q6PE01 Gm22435-201ENSMUST00000158552 128 ntBASIC2.18□□□□□ -2.06
Snrnp40Q6PE01 Gm8338-201ENSMUST00000163928 363 ntBASIC2.18□□□□□ -2.06
Snrnp40Q6PE01 Gm17065-201ENSMUST00000165245 239 ntBASIC2.18□□□□□ -2.06
Snrnp40Q6PE01 Gm22192-201ENSMUST00000175128 85 ntBASIC2.18□□□□□ -2.06
Snrnp40Q6PE01 Mir28b-201ENSMUST00000175399 80 ntBASIC2.18□□□□□ -2.06
Snrnp40Q6PE01 Gm27640-201ENSMUST00000184580 147 ntBASIC2.18□□□□□ -2.06
Snrnp40Q6PE01 Mir3569-201ENSMUST00000185080 58 ntBASIC2.18□□□□□ -2.06
Snrnp40Q6PE01 Mir6376-201ENSMUST00000185149 131 ntBASIC2.18□□□□□ -2.06
Snrnp40Q6PE01 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.18□□□□□ -2.06
Snrnp40Q6PE01 Gm28418-201ENSMUST00000186179 423 ntBASIC2.18□□□□□ -2.06
Snrnp40Q6PE01 Gm37377-201ENSMUST00000191733 304 ntBASIC2.18□□□□□ -2.06
Snrnp40Q6PE01 Gm45315-201ENSMUST00000209283 333 ntBASIC2.18□□□□□ -2.06
Snrnp40Q6PE01 Gm45403-201ENSMUST00000209453 276 ntBASIC2.18□□□□□ -2.06
Snrnp40Q6PE01 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC2.18□□□□□ -2.06
Snrnp40Q6PE01 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Snrnp40Q6PE01 AC130821.1-201ENSMUST00000221997 293 ntBASIC2.18□□□□□ -2.06
Snrnp40Q6PE01 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.18□□□□□ -2.06
Snrnp40Q6PE01 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC2.18□□□□□ -2.06
Snrnp40Q6PE01 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.18□□□□□ -2.06
Snrnp40Q6PE01 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.18□□□□□ -2.06
Snrnp40Q6PE01 Snord42a-201ENSMUST00000082606 65 ntBASIC2.18□□□□□ -2.06
Snrnp40Q6PE01 Gm25632-201ENSMUST00000083112 85 ntBASIC2.18□□□□□ -2.06
Snrnp40Q6PE01 Gm26265-201ENSMUST00000083277 135 ntBASIC2.18□□□□□ -2.06
Snrnp40Q6PE01 Mir322-201ENSMUST00000083484 95 ntBASIC2.18□□□□□ -2.06
Snrnp40Q6PE01 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.18□□□□□ -2.06
Snrnp40Q6PE01 Gm15088-201ENSMUST00000117973 1508 ntBASIC2.17□□□□□ -2.06
Snrnp40Q6PE01 Gm15098-201ENSMUST00000119036 1508 ntBASIC2.17□□□□□ -2.06
Snrnp40Q6PE01 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.17□□□□□ -2.06
Snrnp40Q6PE01 Gm24338-201ENSMUST00000104205 127 ntBASIC2.17□□□□□ -2.06
Snrnp40Q6PE01 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Snrnp40Q6PE01 Mir669i-201ENSMUST00000117007 127 ntBASIC2.17□□□□□ -2.06
Snrnp40Q6PE01 Gm13518-201ENSMUST00000120018 233 ntBASIC2.17□□□□□ -2.06
Snrnp40Q6PE01 Gm12837-201ENSMUST00000120131 373 ntBASIC2.17□□□□□ -2.06
Snrnp40Q6PE01 Mup-ps22-201ENSMUST00000121611 243 ntBASIC2.17□□□□□ -2.06
Snrnp40Q6PE01 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC2.17□□□□□ -2.06
Snrnp40Q6PE01 Gm23048-201ENSMUST00000157237 129 ntBASIC2.17□□□□□ -2.06
Snrnp40Q6PE01 Gm24736-201ENSMUST00000158862 130 ntBASIC2.17□□□□□ -2.06
Snrnp40Q6PE01 Gm24388-201ENSMUST00000177872 107 ntBASIC2.17□□□□□ -2.06
Snrnp40Q6PE01 Gm25457-201ENSMUST00000179509 107 ntBASIC2.17□□□□□ -2.06
Snrnp40Q6PE01 Gm28008-201ENSMUST00000184021 186 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 135 ms