Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Gm18617-201ENSMUST00000222311 259 ntBASIC2.35□□□□□ -2.03
Hmgb4Q6P8W9 Gm24313-201ENSMUST00000082561 133 ntBASIC2.35□□□□□ -2.03
Hmgb4Q6P8W9 Gm25796-201ENSMUST00000082645 163 ntBASIC2.35□□□□□ -2.03
Hmgb4Q6P8W9 Gm25628-201ENSMUST00000084002 105 ntBASIC2.35□□□□□ -2.03
Hmgb4Q6P8W9 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.35□□□□□ -2.03
Hmgb4Q6P8W9 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
Hmgb4Q6P8W9 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.34□□□□□ -2.03
Hmgb4Q6P8W9 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.34□□□□□ -2.03
Hmgb4Q6P8W9 Gm14652-201ENSMUST00000118479 235 ntBASIC2.34□□□□□ -2.03
Hmgb4Q6P8W9 Gm14972-201ENSMUST00000121780 364 ntBASIC2.34□□□□□ -2.03
Hmgb4Q6P8W9 Gm25269-201ENSMUST00000122601 104 ntBASIC2.34□□□□□ -2.03
Hmgb4Q6P8W9 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.34□□□□□ -2.03
Hmgb4Q6P8W9 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC2.34□□□□□ -2.03
Hmgb4Q6P8W9 Gm8292-201ENSMUST00000162574 396 ntBASIC2.34□□□□□ -2.03
Hmgb4Q6P8W9 Gm43238-201ENSMUST00000196463 359 ntBASIC2.34□□□□□ -2.03
Hmgb4Q6P8W9 Trav15n-3-201ENSMUST00000200498 168 ntBASIC2.34□□□□□ -2.03
Hmgb4Q6P8W9 Gm43505-201ENSMUST00000200579 139 ntBASIC2.34□□□□□ -2.03
Hmgb4Q6P8W9 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.34□□□□□ -2.03
Hmgb4Q6P8W9 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.34□□□□□ -2.03
Hmgb4Q6P8W9 Gm33654-201ENSMUST00000221704 215 ntBASIC2.34□□□□□ -2.03
Hmgb4Q6P8W9 Gm21937-201ENSMUST00000222825 218 ntBASIC2.34□□□□□ -2.03
Hmgb4Q6P8W9 Gm9174-201ENSMUST00000078149 255 ntBASIC2.34□□□□□ -2.03
Hmgb4Q6P8W9 Mir222-201ENSMUST00000083537 79 ntBASIC2.34□□□□□ -2.03
Hmgb4Q6P8W9 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Hmgb4Q6P8W9 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Hmgb4Q6P8W9 Gm12941-201ENSMUST00000117934 220 ntBASIC2.33□□□□□ -2.04
Hmgb4Q6P8W9 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC2.33□□□□□ -2.04
Hmgb4Q6P8W9 Gm13396-201ENSMUST00000120617 271 ntBASIC2.33□□□□□ -2.04
Hmgb4Q6P8W9 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.33□□□□□ -2.04
Hmgb4Q6P8W9 Gm24388-201ENSMUST00000177872 107 ntBASIC2.33□□□□□ -2.04
Hmgb4Q6P8W9 Gm25457-201ENSMUST00000179509 107 ntBASIC2.33□□□□□ -2.04
Hmgb4Q6P8W9 Gm20257-202ENSMUST00000188643 130 ntBASIC2.33□□□□□ -2.04
Hmgb4Q6P8W9 Gm43587-201ENSMUST00000199590 204 ntBASIC2.33□□□□□ -2.04
Hmgb4Q6P8W9 Gm43578-201ENSMUST00000201250 459 ntBASIC2.33□□□□□ -2.04
Hmgb4Q6P8W9 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.33□□□□□ -2.04
Hmgb4Q6P8W9 Gm5023-201ENSMUST00000217442 587 ntBASIC2.33□□□□□ -2.04
Hmgb4Q6P8W9 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC2.33□□□□□ -2.04
Hmgb4Q6P8W9 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC2.33□□□□□ -2.04
Hmgb4Q6P8W9 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.33□□□□□ -2.04
Hmgb4Q6P8W9 Gm25929-201ENSMUST00000082784 107 ntBASIC2.33□□□□□ -2.04
Hmgb4Q6P8W9 Gm23721-201ENSMUST00000083005 107 ntBASIC2.33□□□□□ -2.04
Hmgb4Q6P8W9 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Hmgb4Q6P8W9 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Hmgb4Q6P8W9 Gm22032-201ENSMUST00000116946 116 ntBASIC2.32□□□□□ -2.04
Hmgb4Q6P8W9 Gm24937-201ENSMUST00000122597 134 ntBASIC2.32□□□□□ -2.04
Hmgb4Q6P8W9 Gm25625-201ENSMUST00000157221 96 ntBASIC2.32□□□□□ -2.04
Hmgb4Q6P8W9 Gm22159-201ENSMUST00000158412 130 ntBASIC2.32□□□□□ -2.04
Hmgb4Q6P8W9 Mir1927-201ENSMUST00000158579 109 ntBASIC2.32□□□□□ -2.04
Hmgb4Q6P8W9 Gm7258-201ENSMUST00000179317 300 ntBASIC2.32□□□□□ -2.04
Hmgb4Q6P8W9 Mir7226-201ENSMUST00000184953 60 ntBASIC2.32□□□□□ -2.04
Hmgb4Q6P8W9 Gm44337-201ENSMUST00000196553 114 ntBASIC2.32□□□□□ -2.04
Hmgb4Q6P8W9 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
Hmgb4Q6P8W9 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Hmgb4Q6P8W9 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
Hmgb4Q6P8W9 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.32□□□□□ -2.04
Hmgb4Q6P8W9 Gm13439-201ENSMUST00000117541 409 ntBASIC2.31□□□□□ -2.04
Hmgb4Q6P8W9 Gm24892-201ENSMUST00000122747 104 ntBASIC2.31□□□□□ -2.04
Hmgb4Q6P8W9 Gm6956-201ENSMUST00000134724 546 ntBASIC2.31□□□□□ -2.04
Hmgb4Q6P8W9 Gm25012-201ENSMUST00000158396 164 ntBASIC2.31□□□□□ -2.04
Hmgb4Q6P8W9 Gm21978-201ENSMUST00000179696 377 ntBASIC2.31□□□□□ -2.04
Hmgb4Q6P8W9 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.31□□□□□ -2.04
Hmgb4Q6P8W9 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC2.31□□□□□ -2.04
Hmgb4Q6P8W9 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.31□□□□□ -2.04
Hmgb4Q6P8W9 AL603630.1-201ENSMUST00000214781 147 ntBASIC2.31□□□□□ -2.04
Hmgb4Q6P8W9 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Hmgb4Q6P8W9 AC192333.1-201ENSMUST00000224573 376 ntBASIC2.31□□□□□ -2.04
Hmgb4Q6P8W9 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.31□□□□□ -2.04
Hmgb4Q6P8W9 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.31□□□□□ -2.04
Hmgb4Q6P8W9 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Hmgb4Q6P8W9 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
Hmgb4Q6P8W9 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.3□□□□□ -2.04
Hmgb4Q6P8W9 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.3□□□□□ -2.04
Hmgb4Q6P8W9 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.3□□□□□ -2.04
Hmgb4Q6P8W9 Gm26077-201ENSMUST00000104064 123 ntBASIC2.3□□□□□ -2.04
Hmgb4Q6P8W9 Gm25848-201ENSMUST00000116790 144 ntBASIC2.3□□□□□ -2.04
Hmgb4Q6P8W9 Gm11798-201ENSMUST00000119150 421 ntBASIC2.3□□□□□ -2.04
Hmgb4Q6P8W9 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Hmgb4Q6P8W9 Gm22083-201ENSMUST00000157586 102 ntBASIC2.3□□□□□ -2.04
Hmgb4Q6P8W9 Gm25910-201ENSMUST00000157620 140 ntBASIC2.3□□□□□ -2.04
Hmgb4Q6P8W9 Gm24504-201ENSMUST00000157679 100 ntBASIC2.3□□□□□ -2.04
Hmgb4Q6P8W9 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
Hmgb4Q6P8W9 Gm25121-201ENSMUST00000179846 79 ntBASIC2.3□□□□□ -2.04
Hmgb4Q6P8W9 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.3□□□□□ -2.04
Hmgb4Q6P8W9 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.3□□□□□ -2.04
Hmgb4Q6P8W9 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.3□□□□□ -2.04
Hmgb4Q6P8W9 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC2.3□□□□□ -2.04
Hmgb4Q6P8W9 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.3□□□□□ -2.04
Hmgb4Q6P8W9 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2.3□□□□□ -2.04
Hmgb4Q6P8W9 Snord104-201ENSMUST00000083192 70 ntBASIC2.3□□□□□ -2.04
Hmgb4Q6P8W9 Gm24661-201ENSMUST00000083205 104 ntBASIC2.3□□□□□ -2.04
Hmgb4Q6P8W9 Gm25896-201ENSMUST00000083713 136 ntBASIC2.3□□□□□ -2.04
Hmgb4Q6P8W9 Gm18360-201ENSMUST00000173327 1524 ntBASIC2.3□□□□□ -2.04
Hmgb4Q6P8W9 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.29□□□□□ -2.04
Hmgb4Q6P8W9 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
Hmgb4Q6P8W9 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Hmgb4Q6P8W9 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Hmgb4Q6P8W9 Gm23951-201ENSMUST00000104029 132 ntBASIC2.29□□□□□ -2.04
Hmgb4Q6P8W9 Gm24280-201ENSMUST00000104237 134 ntBASIC2.29□□□□□ -2.04
Hmgb4Q6P8W9 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.29□□□□□ -2.04
Hmgb4Q6P8W9 Gm13588-201ENSMUST00000120026 135 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms