Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Gm26317-201ENSMUST00000083894 107 ntBASIC1.72□□□□□ -2.13
Usf1Q61069 Gm22352-201ENSMUST00000083917 107 ntBASIC1.72□□□□□ -2.13
Usf1Q61069 Gm24448-201ENSMUST00000083979 107 ntBASIC1.72□□□□□ -2.13
Usf1Q61069 Gm22798-201ENSMUST00000083992 107 ntBASIC1.72□□□□□ -2.13
Usf1Q61069 Gm26427-201ENSMUST00000093648 107 ntBASIC1.72□□□□□ -2.13
Usf1Q61069 Gm22886-201ENSMUST00000093714 107 ntBASIC1.72□□□□□ -2.13
Usf1Q61069 Gm22170-201ENSMUST00000097247 107 ntBASIC1.72□□□□□ -2.13
Usf1Q61069 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.72□□□□□ -2.13
Usf1Q61069 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.71□□□□□ -2.13
Usf1Q61069 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.71□□□□□ -2.14
Usf1Q61069 Gm26080-201ENSMUST00000104069 131 ntBASIC1.71□□□□□ -2.14
Usf1Q61069 Gm15215-201ENSMUST00000117773 489 ntBASIC1.71□□□□□ -2.14
Usf1Q61069 Gm14364-201ENSMUST00000129209 267 ntBASIC1.71□□□□□ -2.14
Usf1Q61069 Gm24478-201ENSMUST00000157439 158 ntBASIC1.71□□□□□ -2.14
Usf1Q61069 Gm24837-201ENSMUST00000158683 81 ntBASIC1.71□□□□□ -2.14
Usf1Q61069 Gm22800-201ENSMUST00000175627 94 ntBASIC1.71□□□□□ -2.14
Usf1Q61069 Gm27313-201ENSMUST00000183500 142 ntBASIC1.71□□□□□ -2.14
Usf1Q61069 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC1.71□□□□□ -2.14
Usf1Q61069 Gm37923-201ENSMUST00000191624 161 ntBASIC1.71□□□□□ -2.14
Usf1Q61069 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.71□□□□□ -2.14
Usf1Q61069 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.71□□□□□ -2.14
Usf1Q61069 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.71□□□□□ -2.14
Usf1Q61069 AC124772.1-201ENSMUST00000221325 151 ntBASIC1.71□□□□□ -2.14
Usf1Q61069 Gm23462-201ENSMUST00000083264 104 ntBASIC1.71□□□□□ -2.14
Usf1Q61069 Mir29c-201ENSMUST00000083614 88 ntBASIC1.71□□□□□ -2.14
Usf1Q61069 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Usf1Q61069 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.71□□□□□ -2.14
Usf1Q61069 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Usf1Q61069 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.7□□□□□ -2.14
Usf1Q61069 Gm22761-201ENSMUST00000102278 96 ntBASIC1.7□□□□□ -2.14
Usf1Q61069 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.7□□□□□ -2.14
Usf1Q61069 Gm15010-201ENSMUST00000117153 407 ntBASIC1.7□□□□□ -2.14
Usf1Q61069 Gm26149-201ENSMUST00000157432 108 ntBASIC1.7□□□□□ -2.14
Usf1Q61069 Gm25384-201ENSMUST00000157807 105 ntBASIC1.7□□□□□ -2.14
Usf1Q61069 Gm23411-201ENSMUST00000157988 62 ntBASIC1.7□□□□□ -2.14
Usf1Q61069 Gm24573-201ENSMUST00000175499 112 ntBASIC1.7□□□□□ -2.14
Usf1Q61069 Mir195b-201ENSMUST00000184814 97 ntBASIC1.7□□□□□ -2.14
Usf1Q61069 Gm27979-201ENSMUST00000185126 56 ntBASIC1.7□□□□□ -2.14
Usf1Q61069 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Usf1Q61069 Gm37054-201ENSMUST00000193481 543 ntBASIC1.7□□□□□ -2.14
Usf1Q61069 Mir7021-201ENSMUST00000197026 63 ntBASIC1.7□□□□□ -2.14
Usf1Q61069 Gm43245-201ENSMUST00000197603 468 ntBASIC1.7□□□□□ -2.14
Usf1Q61069 Gm5001-201ENSMUST00000204361 331 ntBASIC1.7□□□□□ -2.14
Usf1Q61069 Gm43865-201ENSMUST00000204721 127 ntBASIC1.7□□□□□ -2.14
Usf1Q61069 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.7□□□□□ -2.14
Usf1Q61069 AC116589.1-201ENSMUST00000220634 327 ntBASIC1.7□□□□□ -2.14
Usf1Q61069 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Usf1Q61069 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC1.7□□□□□ -2.14
Usf1Q61069 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.7□□□□□ -2.14
Usf1Q61069 Gm25402-201ENSMUST00000082966 131 ntBASIC1.7□□□□□ -2.14
Usf1Q61069 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.7□□□□□ -2.14
Usf1Q61069 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Usf1Q61069 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Usf1Q61069 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Usf1Q61069 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Usf1Q61069 Gm12255-201ENSMUST00000117184 284 ntBASIC1.69□□□□□ -2.14
Usf1Q61069 Gm14355-201ENSMUST00000117352 264 ntBASIC1.69□□□□□ -2.14
Usf1Q61069 Gm12235-201ENSMUST00000118596 170 ntBASIC1.69□□□□□ -2.14
Usf1Q61069 Gm13153-201ENSMUST00000120969 637 ntBASIC1.69□□□□□ -2.14
Usf1Q61069 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.69□□□□□ -2.14
Usf1Q61069 Gm24857-201ENSMUST00000158061 310 ntBASIC1.69□□□□□ -2.14
Usf1Q61069 Gm26157-201ENSMUST00000158974 126 ntBASIC1.69□□□□□ -2.14
Usf1Q61069 Gm27878-201ENSMUST00000184000 106 ntBASIC1.69□□□□□ -2.14
Usf1Q61069 Gm28343-201ENSMUST00000185386 112 ntBASIC1.69□□□□□ -2.14
Usf1Q61069 Gm28740-201ENSMUST00000186142 215 ntBASIC1.69□□□□□ -2.14
Usf1Q61069 Gm29134-201ENSMUST00000186579 126 ntBASIC1.69□□□□□ -2.14
Usf1Q61069 Gm28506-201ENSMUST00000189937 150 ntBASIC1.69□□□□□ -2.14
Usf1Q61069 Gm28337-201ENSMUST00000190425 666 ntBASIC1.69□□□□□ -2.14
Usf1Q61069 Gm31123-201ENSMUST00000192094 666 ntBASIC1.69□□□□□ -2.14
Usf1Q61069 Gm44881-201ENSMUST00000205425 367 ntBASIC1.69□□□□□ -2.14
Usf1Q61069 Gm44564-201ENSMUST00000207985 180 ntBASIC1.69□□□□□ -2.14
Usf1Q61069 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC1.69□□□□□ -2.14
Usf1Q61069 CT009718.4-201ENSMUST00000221881 109 ntBASIC1.69□□□□□ -2.14
Usf1Q61069 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.69□□□□□ -2.14
Usf1Q61069 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.69□□□□□ -2.14
Usf1Q61069 AC129208.2-201ENSMUST00000228506 320 ntBASIC1.69□□□□□ -2.14
Usf1Q61069 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Usf1Q61069 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Usf1Q61069 Gm23515-201ENSMUST00000082829 107 ntBASIC1.69□□□□□ -2.14
Usf1Q61069 Snora69-201ENSMUST00000083708 131 ntBASIC1.69□□□□□ -2.14
Usf1Q61069 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Usf1Q61069 Gm14624-201ENSMUST00000117746 192 ntBASIC1.68□□□□□ -2.14
Usf1Q61069 Gm23589-201ENSMUST00000157660 105 ntBASIC1.68□□□□□ -2.14
Usf1Q61069 Gm24191-201ENSMUST00000157977 122 ntBASIC1.68□□□□□ -2.14
Usf1Q61069 Gm27510-201ENSMUST00000158214 64 ntBASIC1.68□□□□□ -2.14
Usf1Q61069 Gm24770-201ENSMUST00000158505 92 ntBASIC1.68□□□□□ -2.14
Usf1Q61069 Mir28b-201ENSMUST00000175399 80 ntBASIC1.68□□□□□ -2.14
Usf1Q61069 Gm25933-201ENSMUST00000178943 108 ntBASIC1.68□□□□□ -2.14
Usf1Q61069 Gm37778-201ENSMUST00000191732 190 ntBASIC1.68□□□□□ -2.14
Usf1Q61069 Gm45386-201ENSMUST00000210194 218 ntBASIC1.68□□□□□ -2.14
Usf1Q61069 Gm2829-201ENSMUST00000213121 499 ntBASIC1.68□□□□□ -2.14
Usf1Q61069 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.68□□□□□ -2.14
Usf1Q61069 AC167192.2-201ENSMUST00000224794 198 ntBASIC1.68□□□□□ -2.14
Usf1Q61069 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.68□□□□□ -2.14
Usf1Q61069 AC144628.2-201ENSMUST00000227374 352 ntBASIC1.68□□□□□ -2.14
Usf1Q61069 Gm23453-201ENSMUST00000083326 106 ntBASIC1.68□□□□□ -2.14
Usf1Q61069 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Usf1Q61069 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.67□□□□□ -2.14
Usf1Q61069 Gm22494-201ENSMUST00000104495 128 ntBASIC1.67□□□□□ -2.14
Usf1Q61069 Gm11935-201ENSMUST00000118608 399 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 132.7 ms