Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Scaf1Q5U4C3 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Scaf1Q5U4C3 Gm45264-201ENSMUST00000210090 3995 ntBASIC4.81□□□□□ -1.64
Scaf1Q5U4C3 Gm22497-201ENSMUST00000104499 131 ntBASIC4.81□□□□□ -1.64
Scaf1Q5U4C3 Gm12550-201ENSMUST00000118478 329 ntBASIC4.81□□□□□ -1.64
Scaf1Q5U4C3 Gm12512-201ENSMUST00000119620 217 ntBASIC4.81□□□□□ -1.64
Scaf1Q5U4C3 Gm12926-201ENSMUST00000121158 409 ntBASIC4.81□□□□□ -1.64
Scaf1Q5U4C3 Gm8244-201ENSMUST00000121254 264 ntBASIC4.81□□□□□ -1.64
Scaf1Q5U4C3 Gm14775-201ENSMUST00000122089 310 ntBASIC4.81□□□□□ -1.64
Scaf1Q5U4C3 Gm15365-201ENSMUST00000122392 300 ntBASIC4.81□□□□□ -1.64
Scaf1Q5U4C3 Gm22989-201ENSMUST00000158313 86 ntBASIC4.81□□□□□ -1.64
Scaf1Q5U4C3 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Scaf1Q5U4C3 Gm27585-201ENSMUST00000183717 199 ntBASIC4.81□□□□□ -1.64
Scaf1Q5U4C3 Gm27470-201ENSMUST00000184070 210 ntBASIC4.81□□□□□ -1.64
Scaf1Q5U4C3 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC4.81□□□□□ -1.64
Scaf1Q5U4C3 Gm44459-201ENSMUST00000203926 160 ntBASIC4.81□□□□□ -1.64
Scaf1Q5U4C3 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Scaf1Q5U4C3 Gm23247-201ENSMUST00000083373 107 ntBASIC4.81□□□□□ -1.64
Scaf1Q5U4C3 Gm25630-201ENSMUST00000084000 162 ntBASIC4.81□□□□□ -1.64
Scaf1Q5U4C3 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Scaf1Q5U4C3 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
Scaf1Q5U4C3 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.81□□□□□ -1.64
Scaf1Q5U4C3 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Scaf1Q5U4C3 Gm23697-201ENSMUST00000103897 110 ntBASIC4.8□□□□□ -1.64
Scaf1Q5U4C3 Mir466p-201ENSMUST00000103925 89 ntBASIC4.8□□□□□ -1.64
Scaf1Q5U4C3 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC4.8□□□□□ -1.64
Scaf1Q5U4C3 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC4.8□□□□□ -1.64
Scaf1Q5U4C3 Gm23536-201ENSMUST00000157541 134 ntBASIC4.8□□□□□ -1.64
Scaf1Q5U4C3 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC4.8□□□□□ -1.64
Scaf1Q5U4C3 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Scaf1Q5U4C3 Gm28314-201ENSMUST00000191276 345 ntBASIC4.8□□□□□ -1.64
Scaf1Q5U4C3 Gm32381-201ENSMUST00000203192 476 ntBASIC4.8□□□□□ -1.64
Scaf1Q5U4C3 Gm36776-201ENSMUST00000207006 203 ntBASIC4.8□□□□□ -1.64
Scaf1Q5U4C3 Mir302d-201ENSMUST00000083513 66 ntBASIC4.8□□□□□ -1.64
Scaf1Q5U4C3 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Scaf1Q5U4C3 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.8□□□□□ -1.64
Scaf1Q5U4C3 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Scaf1Q5U4C3 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Scaf1Q5U4C3 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
Scaf1Q5U4C3 Gm22472-201ENSMUST00000104115 134 ntBASIC4.79□□□□□ -1.64
Scaf1Q5U4C3 Mir291a-201ENSMUST00000104815 82 ntBASIC4.79□□□□□ -1.64
Scaf1Q5U4C3 Gm26249-201ENSMUST00000116708 118 ntBASIC4.79□□□□□ -1.64
Scaf1Q5U4C3 Gm12025-201ENSMUST00000117768 144 ntBASIC4.79□□□□□ -1.64
Scaf1Q5U4C3 Gm23231-201ENSMUST00000157299 104 ntBASIC4.79□□□□□ -1.64
Scaf1Q5U4C3 Gm25519-201ENSMUST00000158392 127 ntBASIC4.79□□□□□ -1.64
Scaf1Q5U4C3 Gm24739-201ENSMUST00000158855 292 ntBASIC4.79□□□□□ -1.64
Scaf1Q5U4C3 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Scaf1Q5U4C3 Mir3070b-201ENSMUST00000175205 89 ntBASIC4.79□□□□□ -1.64
Scaf1Q5U4C3 Gm27285-201ENSMUST00000183875 127 ntBASIC4.79□□□□□ -1.64
Scaf1Q5U4C3 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC4.79□□□□□ -1.64
Scaf1Q5U4C3 CT009604.2-201ENSMUST00000225531 377 ntBASIC4.79□□□□□ -1.64
Scaf1Q5U4C3 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Scaf1Q5U4C3 Gm22739-201ENSMUST00000083437 160 ntBASIC4.79□□□□□ -1.64
Scaf1Q5U4C3 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Scaf1Q5U4C3 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Scaf1Q5U4C3 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Scaf1Q5U4C3 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Scaf1Q5U4C3 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Scaf1Q5U4C3 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Scaf1Q5U4C3 Gm23175-201ENSMUST00000104371 132 ntBASIC4.78□□□□□ -1.64
Scaf1Q5U4C3 Gm12155-201ENSMUST00000121267 160 ntBASIC4.78□□□□□ -1.64
Scaf1Q5U4C3 Gm22956-201ENSMUST00000122520 80 ntBASIC4.78□□□□□ -1.64
Scaf1Q5U4C3 Gm16533-201ENSMUST00000140035 228 ntBASIC4.78□□□□□ -1.64
Scaf1Q5U4C3 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC4.78□□□□□ -1.64
Scaf1Q5U4C3 Gm27592-201ENSMUST00000157729 126 ntBASIC4.78□□□□□ -1.64
Scaf1Q5U4C3 Gm22174-201ENSMUST00000175050 125 ntBASIC4.78□□□□□ -1.64
Scaf1Q5U4C3 Gm22692-201ENSMUST00000175055 125 ntBASIC4.78□□□□□ -1.64
Scaf1Q5U4C3 Gm27634-201ENSMUST00000175060 126 ntBASIC4.78□□□□□ -1.64
Scaf1Q5U4C3 Gm22460-201ENSMUST00000175269 124 ntBASIC4.78□□□□□ -1.64
Scaf1Q5U4C3 Gm25535-201ENSMUST00000175364 125 ntBASIC4.78□□□□□ -1.64
Scaf1Q5U4C3 Gm24365-201ENSMUST00000175384 125 ntBASIC4.78□□□□□ -1.64
Scaf1Q5U4C3 Gm44310-201ENSMUST00000175424 126 ntBASIC4.78□□□□□ -1.64
Scaf1Q5U4C3 Gm22639-201ENSMUST00000175591 125 ntBASIC4.78□□□□□ -1.64
Scaf1Q5U4C3 Gm24979-201ENSMUST00000178626 126 ntBASIC4.78□□□□□ -1.64
Scaf1Q5U4C3 Gm27582-201ENSMUST00000184084 126 ntBASIC4.78□□□□□ -1.64
Scaf1Q5U4C3 Gm27743-201ENSMUST00000185136 126 ntBASIC4.78□□□□□ -1.64
Scaf1Q5U4C3 Gm32175-201ENSMUST00000193641 346 ntBASIC4.78□□□□□ -1.64
Scaf1Q5U4C3 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Scaf1Q5U4C3 Gm45809-201ENSMUST00000211661 3894 ntBASIC4.78□□□□□ -1.64
Scaf1Q5U4C3 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Scaf1Q5U4C3 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC4.77□□□□□ -1.65
Scaf1Q5U4C3 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Scaf1Q5U4C3 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Scaf1Q5U4C3 Gm14069-201ENSMUST00000120815 229 ntBASIC4.77□□□□□ -1.65
Scaf1Q5U4C3 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC4.77□□□□□ -1.65
Scaf1Q5U4C3 Gm6796-201ENSMUST00000211919 243 ntBASIC4.77□□□□□ -1.65
Scaf1Q5U4C3 Gm9174-201ENSMUST00000078149 255 ntBASIC4.77□□□□□ -1.65
Scaf1Q5U4C3 Gm6030-201ENSMUST00000078768 402 ntBASIC4.77□□□□□ -1.65
Scaf1Q5U4C3 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC4.77□□□□□ -1.65
Scaf1Q5U4C3 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
Scaf1Q5U4C3 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Scaf1Q5U4C3 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Scaf1Q5U4C3 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Scaf1Q5U4C3 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Scaf1Q5U4C3 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
Scaf1Q5U4C3 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Scaf1Q5U4C3 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Scaf1Q5U4C3 Gm23609-201ENSMUST00000104542 127 ntBASIC4.76□□□□□ -1.65
Scaf1Q5U4C3 Gm11786-201ENSMUST00000120799 155 ntBASIC4.76□□□□□ -1.65
Scaf1Q5U4C3 Gm25424-201ENSMUST00000157612 58 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms