Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm28766-201ENSMUST00000191086 234 ntBASIC1.26□□□□□ -2.21
Ccdc88aQ5SNZ0 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm43529-201ENSMUST00000199178 412 ntBASIC1.26□□□□□ -2.21
Ccdc88aQ5SNZ0 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC1.26□□□□□ -2.21
Ccdc88aQ5SNZ0 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC1.26□□□□□ -2.21
Ccdc88aQ5SNZ0 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm24490-201ENSMUST00000083803 98 ntBASIC1.26□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm23503-201ENSMUST00000083903 107 ntBASIC1.26□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm381-201ENSMUST00000117443 2037 ntBASIC1.26□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm15084-201ENSMUST00000178585 1502 ntBASIC1.26□□□□□ -2.21
Ccdc88aQ5SNZ0 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm14007-201ENSMUST00000118288 210 ntBASIC1.26□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm20613-201ENSMUST00000175828 345 ntBASIC1.26□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm19932-201ENSMUST00000177033 313 ntBASIC1.26□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Ccdc88aQ5SNZ0 Mir6370-201ENSMUST00000183510 120 ntBASIC1.26□□□□□ -2.21
Ccdc88aQ5SNZ0 Mir7667-201ENSMUST00000183866 63 ntBASIC1.26□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm28956-201ENSMUST00000189047 427 ntBASIC1.26□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.26□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm44462-201ENSMUST00000199696 129 ntBASIC1.26□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm29817-201ENSMUST00000210098 172 ntBASIC1.26□□□□□ -2.21
Ccdc88aQ5SNZ0 AC153957.1-201ENSMUST00000215235 229 ntBASIC1.26□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm22229-201ENSMUST00000082987 108 ntBASIC1.26□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm26493-201ENSMUST00000083155 136 ntBASIC1.26□□□□□ -2.21
Ccdc88aQ5SNZ0 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.26□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm14551-201ENSMUST00000120802 256 ntBASIC1.25□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm11849-201ENSMUST00000121293 261 ntBASIC1.25□□□□□ -2.21
Ccdc88aQ5SNZ0 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC1.25□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC1.25□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm42807-201ENSMUST00000200141 329 ntBASIC1.25□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm44564-201ENSMUST00000207985 180 ntBASIC1.25□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm44666-201ENSMUST00000208544 391 ntBASIC1.25□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm24805-201ENSMUST00000082931 104 ntBASIC1.25□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm24942-201ENSMUST00000158328 114 ntBASIC1.24□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm22584-201ENSMUST00000177935 92 ntBASIC1.24□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm27711-201ENSMUST00000183802 118 ntBASIC1.24□□□□□ -2.21
Ccdc88aQ5SNZ0 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.24□□□□□ -2.21
Ccdc88aQ5SNZ0 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Ccdc88aQ5SNZ0 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.24□□□□□ -2.21
Ccdc88aQ5SNZ0 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.24□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Ccdc88aQ5SNZ0 n-R5s202-201ENSMUST00000104517 114 ntBASIC1.24□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm13368-201ENSMUST00000122443 430 ntBASIC1.24□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm25102-201ENSMUST00000122479 112 ntBASIC1.24□□□□□ -2.21
Ccdc88aQ5SNZ0 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC1.24□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm29231-201ENSMUST00000179850 319 ntBASIC1.24□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm29603-201ENSMUST00000186792 334 ntBASIC1.24□□□□□ -2.21
Ccdc88aQ5SNZ0 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC1.24□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm43680-201ENSMUST00000199466 340 ntBASIC1.24□□□□□ -2.21
Ccdc88aQ5SNZ0 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC1.24□□□□□ -2.21
Ccdc88aQ5SNZ0 AC167229.1-201ENSMUST00000220057 469 ntBASIC1.24□□□□□ -2.21
Ccdc88aQ5SNZ0 AC124569.4-201ENSMUST00000223830 1220 ntBASIC1.24□□□□□ -2.21
Ccdc88aQ5SNZ0 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.24□□□□□ -2.21
Ccdc88aQ5SNZ0 Mir374b-201ENSMUST00000102314 95 ntBASIC1.23□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm8858-201ENSMUST00000118259 342 ntBASIC1.23□□□□□ -2.21
Ccdc88aQ5SNZ0 Defa-ps13-201ENSMUST00000120695 204 ntBASIC1.23□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm15077-201ENSMUST00000122344 362 ntBASIC1.23□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm23429-201ENSMUST00000122486 149 ntBASIC1.23□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm22485-201ENSMUST00000157990 109 ntBASIC1.23□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm27419-201ENSMUST00000184576 109 ntBASIC1.23□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm28299-201ENSMUST00000189908 339 ntBASIC1.23□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm36891-201ENSMUST00000191995 655 ntBASIC1.23□□□□□ -2.21
Ccdc88aQ5SNZ0 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm7692-201ENSMUST00000213534 409 ntBASIC1.23□□□□□ -2.21
Ccdc88aQ5SNZ0 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC1.23□□□□□ -2.21
Ccdc88aQ5SNZ0 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.23□□□□□ -2.21
Ccdc88aQ5SNZ0 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Ccdc88aQ5SNZ0 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.23□□□□□ -2.21
Ccdc88aQ5SNZ0 Zfp640-202ENSMUST00000224116 1562 ntBASIC1.23□□□□□ -2.21
Ccdc88aQ5SNZ0 Mir582-201ENSMUST00000103758 81 ntBASIC1.22□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm24579-201ENSMUST00000103964 144 ntBASIC1.22□□□□□ -2.21
Ccdc88aQ5SNZ0 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC1.22□□□□□ -2.21
Ccdc88aQ5SNZ0 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC1.22□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC1.22□□□□□ -2.21
Ccdc88aQ5SNZ0 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm18546-201ENSMUST00000197245 676 ntBASIC1.22□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.22□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm44990-201ENSMUST00000203922 217 ntBASIC1.22□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm24977-201ENSMUST00000083106 163 ntBASIC1.22□□□□□ -2.21
Ccdc88aQ5SNZ0 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.22□□□□□ -2.21
Ccdc88aQ5SNZ0 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
Ccdc88aQ5SNZ0 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.22□□□□□ -2.21
Ccdc88aQ5SNZ0 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC1.22□□□□□ -2.21
Ccdc88aQ5SNZ0 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.22□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm24419-201ENSMUST00000157875 332 ntBASIC1.22□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm20543-201ENSMUST00000174200 726 ntBASIC1.22□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm25670-201ENSMUST00000178423 107 ntBASIC1.22□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm25633-201ENSMUST00000178565 107 ntBASIC1.22□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm26239-201ENSMUST00000178842 107 ntBASIC1.22□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm27490-201ENSMUST00000184754 128 ntBASIC1.22□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.22□□□□□ -2.21
Ccdc88aQ5SNZ0 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC1.22□□□□□ -2.21
Ccdc88aQ5SNZ0 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.22□□□□□ -2.21
Ccdc88aQ5SNZ0 Gm24292-201ENSMUST00000082888 107 ntBASIC1.22□□□□□ -2.21
Ccdc88aQ5SNZ0 Mir300-201ENSMUST00000083485 79 ntBASIC1.22□□□□□ -2.21
Ccdc88aQ5SNZ0 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.21□□□□□ -2.22
Ccdc88aQ5SNZ0 Mir223-201ENSMUST00000102112 110 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 106.3 ms