Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC0.17□□□□□ -2.38
Trav3-1Q5R1I8 Gm12889-201ENSMUST00000118684 241 ntBASIC0.17□□□□□ -2.38
Trav3-1Q5R1I8 Gm14884-201ENSMUST00000120456 196 ntBASIC0.17□□□□□ -2.38
Trav3-1Q5R1I8 Gm14402-201ENSMUST00000122217 508 ntBASIC0.17□□□□□ -2.38
Trav3-1Q5R1I8 Gm25393-201ENSMUST00000157336 285 ntBASIC0.17□□□□□ -2.38
Trav3-1Q5R1I8 Mir5118-201ENSMUST00000175551 67 ntBASIC0.17□□□□□ -2.38
Trav3-1Q5R1I8 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC0.17□□□□□ -2.38
Trav3-1Q5R1I8 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC0.17□□□□□ -2.38
Trav3-1Q5R1I8 Gm42834-201ENSMUST00000196845 256 ntBASIC0.17□□□□□ -2.38
Trav3-1Q5R1I8 Igkv4-65-201ENSMUST00000196986 358 ntBASIC0.17□□□□□ -2.38
Trav3-1Q5R1I8 Gm18213-201ENSMUST00000207850 178 ntBASIC0.17□□□□□ -2.38
Trav3-1Q5R1I8 AC162387.1-201ENSMUST00000213369 213 ntBASIC0.17□□□□□ -2.38
Trav3-1Q5R1I8 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC0.17□□□□□ -2.38
Trav3-1Q5R1I8 Gm40810-201ENSMUST00000219149 253 ntBASIC0.17□□□□□ -2.38
Trav3-1Q5R1I8 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.17□□□□□ -2.38
Trav3-1Q5R1I8 CT009733.1-203ENSMUST00000224033 451 ntBASIC0.17□□□□□ -2.38
Trav3-1Q5R1I8 AC154252.1-201ENSMUST00000226041 473 ntBASIC0.17□□□□□ -2.38
Trav3-1Q5R1I8 AC168062.3-201ENSMUST00000227025 165 ntBASIC0.17□□□□□ -2.38
Trav3-1Q5R1I8 AC133156.1-202ENSMUST00000227284 363 ntBASIC0.17□□□□□ -2.38
Trav3-1Q5R1I8 AC151833.1-201ENSMUST00000227752 574 ntBASIC0.17□□□□□ -2.38
Trav3-1Q5R1I8 Gm26326-201ENSMUST00000083070 129 ntBASIC0.17□□□□□ -2.38
Trav3-1Q5R1I8 Mir340-201ENSMUST00000083483 98 ntBASIC0.17□□□□□ -2.38
Trav3-1Q5R1I8 Gm7869-201ENSMUST00000121457 1322 ntBASIC0.16□□□□□ -2.38
Trav3-1Q5R1I8 Gm25213-201ENSMUST00000102388 113 ntBASIC0.16□□□□□ -2.38
Trav3-1Q5R1I8 Gm25832-201ENSMUST00000104140 130 ntBASIC0.16□□□□□ -2.38
Trav3-1Q5R1I8 Gm22221-201ENSMUST00000157362 103 ntBASIC0.16□□□□□ -2.38
Trav3-1Q5R1I8 Gm24476-201ENSMUST00000157437 131 ntBASIC0.16□□□□□ -2.38
Trav3-1Q5R1I8 Mir15a-201ENSMUST00000175266 84 ntBASIC0.16□□□□□ -2.38
Trav3-1Q5R1I8 Gm24638-201ENSMUST00000179807 132 ntBASIC0.16□□□□□ -2.38
Trav3-1Q5R1I8 Gm26914-201ENSMUST00000182262 223 ntBASIC0.16□□□□□ -2.38
Trav3-1Q5R1I8 Gm27013-201ENSMUST00000182441 1024 ntBASIC0.16□□□□□ -2.38
Trav3-1Q5R1I8 Mir6411-201ENSMUST00000183556 108 ntBASIC0.16□□□□□ -2.38
Trav3-1Q5R1I8 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
Trav3-1Q5R1I8 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC0.16□□□□□ -2.38
Trav3-1Q5R1I8 AC164161.1-201ENSMUST00000214076 639 ntBASIC0.16□□□□□ -2.38
Trav3-1Q5R1I8 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC0.16□□□□□ -2.38
Trav3-1Q5R1I8 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.16□□□□□ -2.38
Trav3-1Q5R1I8 Gm37642-201ENSMUST00000193166 1735 ntBASIC0.16□□□□□ -2.38
Trav3-1Q5R1I8 AC164297.1-201ENSMUST00000224484 1561 ntBASIC0.15□□□□□ -2.38
Trav3-1Q5R1I8 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.38
Trav3-1Q5R1I8 Gm26080-201ENSMUST00000104069 131 ntBASIC0.15□□□□□ -2.39
Trav3-1Q5R1I8 Gm23175-201ENSMUST00000104371 132 ntBASIC0.15□□□□□ -2.39
Trav3-1Q5R1I8 Gm14355-201ENSMUST00000117352 264 ntBASIC0.15□□□□□ -2.39
Trav3-1Q5R1I8 Gm11792-201ENSMUST00000120640 168 ntBASIC0.15□□□□□ -2.39
Trav3-1Q5R1I8 Gm14362-201ENSMUST00000121679 273 ntBASIC0.15□□□□□ -2.39
Trav3-1Q5R1I8 Gm14364-201ENSMUST00000129209 267 ntBASIC0.15□□□□□ -2.39
Trav3-1Q5R1I8 Gm15254-201ENSMUST00000149567 273 ntBASIC0.15□□□□□ -2.39
Trav3-1Q5R1I8 Gm24780-201ENSMUST00000157635 143 ntBASIC0.15□□□□□ -2.39
Trav3-1Q5R1I8 Gm22556-201ENSMUST00000157803 100 ntBASIC0.15□□□□□ -2.39
Trav3-1Q5R1I8 Gm22706-201ENSMUST00000157907 112 ntBASIC0.15□□□□□ -2.39
Trav3-1Q5R1I8 Gm24905-201ENSMUST00000158129 104 ntBASIC0.15□□□□□ -2.39
Trav3-1Q5R1I8 Gm24076-201ENSMUST00000158179 94 ntBASIC0.15□□□□□ -2.39
Trav3-1Q5R1I8 Gm26116-201ENSMUST00000175600 77 ntBASIC0.15□□□□□ -2.39
Trav3-1Q5R1I8 Gm24390-201ENSMUST00000179578 62 ntBASIC0.15□□□□□ -2.39
Trav3-1Q5R1I8 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC0.15□□□□□ -2.39
Trav3-1Q5R1I8 Gm27289-201ENSMUST00000183341 82 ntBASIC0.15□□□□□ -2.39
Trav3-1Q5R1I8 Gm27676-201ENSMUST00000183669 61 ntBASIC0.15□□□□□ -2.39
Trav3-1Q5R1I8 Mir7658-201ENSMUST00000184043 57 ntBASIC0.15□□□□□ -2.39
Trav3-1Q5R1I8 Gm8151-201ENSMUST00000184817 871 ntBASIC0.15□□□□□ -2.39
Trav3-1Q5R1I8 Mir7017-201ENSMUST00000184894 62 ntBASIC0.15□□□□□ -2.39
Trav3-1Q5R1I8 Gm28412-201ENSMUST00000187243 177 ntBASIC0.15□□□□□ -2.39
Trav3-1Q5R1I8 Mir6962-201ENSMUST00000199512 63 ntBASIC0.15□□□□□ -2.39
Trav3-1Q5R1I8 Gm43914-201ENSMUST00000203592 594 ntBASIC0.15□□□□□ -2.39
Trav3-1Q5R1I8 Gm18598-201ENSMUST00000207724 597 ntBASIC0.15□□□□□ -2.39
Trav3-1Q5R1I8 Gm44554-201ENSMUST00000208738 147 ntBASIC0.15□□□□□ -2.39
Trav3-1Q5R1I8 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC0.15□□□□□ -2.39
Trav3-1Q5R1I8 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC0.15□□□□□ -2.39
Trav3-1Q5R1I8 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
Trav3-1Q5R1I8 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
Trav3-1Q5R1I8 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC0.14□□□□□ -2.39
Trav3-1Q5R1I8 Gm24271-201ENSMUST00000102327 111 ntBASIC0.14□□□□□ -2.39
Trav3-1Q5R1I8 Gm23015-201ENSMUST00000104145 128 ntBASIC0.14□□□□□ -2.39
Trav3-1Q5R1I8 Mir883a-201ENSMUST00000104824 76 ntBASIC0.14□□□□□ -2.39
Trav3-1Q5R1I8 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
Trav3-1Q5R1I8 Mir6355-201ENSMUST00000183687 106 ntBASIC0.14□□□□□ -2.39
Trav3-1Q5R1I8 Gm27715-201ENSMUST00000184714 260 ntBASIC0.14□□□□□ -2.39
Trav3-1Q5R1I8 Gm27421-201ENSMUST00000184729 167 ntBASIC0.14□□□□□ -2.39
Trav3-1Q5R1I8 Gm28794-201ENSMUST00000185276 136 ntBASIC0.14□□□□□ -2.39
Trav3-1Q5R1I8 Gm29600-201ENSMUST00000188687 377 ntBASIC0.14□□□□□ -2.39
Trav3-1Q5R1I8 Gm37361-201ENSMUST00000194345 132 ntBASIC0.14□□□□□ -2.39
Trav3-1Q5R1I8 Gm37801-201ENSMUST00000194754 274 ntBASIC0.14□□□□□ -2.39
Trav3-1Q5R1I8 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC0.14□□□□□ -2.39
Trav3-1Q5R1I8 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC0.14□□□□□ -2.39
Trav3-1Q5R1I8 Gm23969-201ENSMUST00000083324 74 ntBASIC0.14□□□□□ -2.39
Trav3-1Q5R1I8 Gm25650-201ENSMUST00000083784 162 ntBASIC0.14□□□□□ -2.39
Trav3-1Q5R1I8 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC0.14□□□□□ -2.39
Trav3-1Q5R1I8 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC0.14□□□□□ -2.39
Trav3-1Q5R1I8 Gm23058-201ENSMUST00000093703 107 ntBASIC0.14□□□□□ -2.39
Trav3-1Q5R1I8 Gm12102-201ENSMUST00000118251 604 ntBASIC0.13□□□□□ -2.39
Trav3-1Q5R1I8 Gm5396-201ENSMUST00000121222 532 ntBASIC0.13□□□□□ -2.39
Trav3-1Q5R1I8 Gm22163-201ENSMUST00000158408 135 ntBASIC0.13□□□□□ -2.39
Trav3-1Q5R1I8 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC0.13□□□□□ -2.39
Trav3-1Q5R1I8 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC0.13□□□□□ -2.39
Trav3-1Q5R1I8 Gm22716-201ENSMUST00000177596 107 ntBASIC0.13□□□□□ -2.39
Trav3-1Q5R1I8 Gm23355-201ENSMUST00000177614 107 ntBASIC0.13□□□□□ -2.39
Trav3-1Q5R1I8 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC0.13□□□□□ -2.39
Trav3-1Q5R1I8 Mir6975-201ENSMUST00000184879 61 ntBASIC0.13□□□□□ -2.39
Trav3-1Q5R1I8 Gm29661-201ENSMUST00000186781 315 ntBASIC0.13□□□□□ -2.39
Trav3-1Q5R1I8 Gm29308-201ENSMUST00000188863 315 ntBASIC0.13□□□□□ -2.39
Trav3-1Q5R1I8 Trbv7-201ENSMUST00000193339 402 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms