Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm42547-201ENSMUST00000201159 3798 ntBASIC6.65□□□□□ -1.35
Trim41Q5NCC3 AC153967.1-201ENSMUST00000219333 3190 ntBASIC6.65□□□□□ -1.35
Trim41Q5NCC3 Gm37747-201ENSMUST00000193717 4003 ntBASIC6.65□□□□□ -1.35
Trim41Q5NCC3 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Trim41Q5NCC3 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Trim41Q5NCC3 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Trim41Q5NCC3 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Trim41Q5NCC3 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC6.64□□□□□ -1.35
Trim41Q5NCC3 Gm25623-201ENSMUST00000157216 108 ntBASIC6.64□□□□□ -1.35
Trim41Q5NCC3 Gm25253-201ENSMUST00000179958 107 ntBASIC6.64□□□□□ -1.35
Trim41Q5NCC3 Gm38255-201ENSMUST00000194910 2996 ntBASIC6.64□□□□□ -1.35
Trim41Q5NCC3 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Trim41Q5NCC3 AC154313.1-201ENSMUST00000217755 3841 ntBASIC6.64□□□□□ -1.35
Trim41Q5NCC3 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim41Q5NCC3 Gm22708-201ENSMUST00000158987 103 ntBASIC6.63□□□□□ -1.35
Trim41Q5NCC3 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC6.63□□□□□ -1.35
Trim41Q5NCC3 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Trim41Q5NCC3 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC6.63□□□□□ -1.35
Trim41Q5NCC3 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC6.63□□□□□ -1.35
Trim41Q5NCC3 Mir29b-2-201ENSMUST00000083478 81 ntBASIC6.63□□□□□ -1.35
Trim41Q5NCC3 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Trim41Q5NCC3 Gm44283-201ENSMUST00000204461 3950 ntBASIC6.62□□□□□ -1.35
Trim41Q5NCC3 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trim41Q5NCC3 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
Trim41Q5NCC3 Gm22779-201ENSMUST00000104085 107 ntBASIC6.62□□□□□ -1.35
Trim41Q5NCC3 Gm24283-201ENSMUST00000104233 107 ntBASIC6.62□□□□□ -1.35
Trim41Q5NCC3 Gm15861-201ENSMUST00000120979 339 ntBASIC6.62□□□□□ -1.35
Trim41Q5NCC3 Gm25060-201ENSMUST00000157374 130 ntBASIC6.62□□□□□ -1.35
Trim41Q5NCC3 Gm24716-201ENSMUST00000157524 104 ntBASIC6.62□□□□□ -1.35
Trim41Q5NCC3 Gm22551-201ENSMUST00000157795 103 ntBASIC6.62□□□□□ -1.35
Trim41Q5NCC3 Gm26084-201ENSMUST00000157903 104 ntBASIC6.62□□□□□ -1.35
Trim41Q5NCC3 Mir6383-201ENSMUST00000184545 116 ntBASIC6.62□□□□□ -1.35
Trim41Q5NCC3 Gm28924-201ENSMUST00000190012 241 ntBASIC6.62□□□□□ -1.35
Trim41Q5NCC3 Gm45687-201ENSMUST00000209454 155 ntBASIC6.62□□□□□ -1.35
Trim41Q5NCC3 AC123064.2-201ENSMUST00000217758 193 ntBASIC6.62□□□□□ -1.35
Trim41Q5NCC3 Gm22248-201ENSMUST00000082482 150 ntBASIC6.62□□□□□ -1.35
Trim41Q5NCC3 Gm24626-201ENSMUST00000082621 161 ntBASIC6.62□□□□□ -1.35
Trim41Q5NCC3 Gm43404-201ENSMUST00000200424 2534 ntBASIC6.62□□□□□ -1.35
Trim41Q5NCC3 Gm42635-201ENSMUST00000200266 2571 ntBASIC6.62□□□□□ -1.35
Trim41Q5NCC3 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trim41Q5NCC3 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Trim41Q5NCC3 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trim41Q5NCC3 Gm24232-201ENSMUST00000104314 132 ntBASIC6.61□□□□□ -1.35
Trim41Q5NCC3 Trbv7-201ENSMUST00000193339 402 ntBASIC6.61□□□□□ -1.35
Trim41Q5NCC3 Gm25789-201ENSMUST00000083294 76 ntBASIC6.61□□□□□ -1.35
Trim41Q5NCC3 Gm22055-201ENSMUST00000083388 107 ntBASIC6.61□□□□□ -1.35
Trim41Q5NCC3 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Trim41Q5NCC3 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Trim41Q5NCC3 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trim41Q5NCC3 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trim41Q5NCC3 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
Trim41Q5NCC3 Gm37625-201ENSMUST00000194969 4872 ntBASIC6.6□□□□□ -1.35
Trim41Q5NCC3 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Trim41Q5NCC3 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
Trim41Q5NCC3 Gm26476-201ENSMUST00000122618 313 ntBASIC6.6□□□□□ -1.35
Trim41Q5NCC3 Gm22558-201ENSMUST00000157326 95 ntBASIC6.6□□□□□ -1.35
Trim41Q5NCC3 Gm23668-201ENSMUST00000157465 111 ntBASIC6.6□□□□□ -1.35
Trim41Q5NCC3 Gm24842-201ENSMUST00000158681 54 ntBASIC6.6□□□□□ -1.35
Trim41Q5NCC3 Gm44429-201ENSMUST00000203542 186 ntBASIC6.6□□□□□ -1.35
Trim41Q5NCC3 Gm44524-201ENSMUST00000203899 271 ntBASIC6.6□□□□□ -1.35
Trim41Q5NCC3 Gm45006-201ENSMUST00000206078 690 ntBASIC6.6□□□□□ -1.35
Trim41Q5NCC3 AC144783.2-201ENSMUST00000219089 195 ntBASIC6.6□□□□□ -1.35
Trim41Q5NCC3 AL645546.1-201ENSMUST00000225001 189 ntBASIC6.6□□□□□ -1.35
Trim41Q5NCC3 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
Trim41Q5NCC3 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Trim41Q5NCC3 AC115034.1-201ENSMUST00000215393 3846 ntBASIC6.59□□□□□ -1.35
Trim41Q5NCC3 AC156632.1-201ENSMUST00000220626 3845 ntBASIC6.59□□□□□ -1.35
Trim41Q5NCC3 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Trim41Q5NCC3 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Trim41Q5NCC3 Gm37061-201ENSMUST00000195066 3243 ntBASIC6.59□□□□□ -1.35
Trim41Q5NCC3 Snord64-201ENSMUST00000104003 67 ntBASIC6.59□□□□□ -1.35
Trim41Q5NCC3 Gm22674-201ENSMUST00000104413 131 ntBASIC6.59□□□□□ -1.35
Trim41Q5NCC3 Gm14649-201ENSMUST00000121814 324 ntBASIC6.59□□□□□ -1.35
Trim41Q5NCC3 Gm23602-201ENSMUST00000157258 132 ntBASIC6.59□□□□□ -1.35
Trim41Q5NCC3 Gm23380-201ENSMUST00000158448 103 ntBASIC6.59□□□□□ -1.35
Trim41Q5NCC3 Gm24086-201ENSMUST00000175171 98 ntBASIC6.59□□□□□ -1.35
Trim41Q5NCC3 Gm28825-201ENSMUST00000186233 238 ntBASIC6.59□□□□□ -1.35
Trim41Q5NCC3 Gm23244-201ENSMUST00000083375 92 ntBASIC6.59□□□□□ -1.35
Trim41Q5NCC3 AC167250.1-201ENSMUST00000213739 3813 ntBASIC6.59□□□□□ -1.36
Trim41Q5NCC3 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim41Q5NCC3 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC6.58□□□□□ -1.36
Trim41Q5NCC3 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
Trim41Q5NCC3 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Trim41Q5NCC3 Gm12443-201ENSMUST00000122308 323 ntBASIC6.58□□□□□ -1.36
Trim41Q5NCC3 Gm25369-201ENSMUST00000158848 132 ntBASIC6.58□□□□□ -1.36
Trim41Q5NCC3 Gm27445-201ENSMUST00000184484 72 ntBASIC6.58□□□□□ -1.36
Trim41Q5NCC3 Gm25797-201ENSMUST00000082640 107 ntBASIC6.58□□□□□ -1.36
Trim41Q5NCC3 Mir28a-201ENSMUST00000083560 86 ntBASIC6.58□□□□□ -1.36
Trim41Q5NCC3 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Trim41Q5NCC3 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trim41Q5NCC3 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Trim41Q5NCC3 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Trim41Q5NCC3 Gm25308-201ENSMUST00000104171 158 ntBASIC6.57□□□□□ -1.36
Trim41Q5NCC3 Gm11704-201ENSMUST00000120031 214 ntBASIC6.57□□□□□ -1.36
Trim41Q5NCC3 Gm44376-201ENSMUST00000197570 128 ntBASIC6.57□□□□□ -1.36
Trim41Q5NCC3 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC6.57□□□□□ -1.36
Trim41Q5NCC3 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC6.57□□□□□ -1.36
Trim41Q5NCC3 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Trim41Q5NCC3 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Trim41Q5NCC3 Gm38010-201ENSMUST00000192592 2784 ntBASIC6.56□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 142.9 ms