Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm43367-201ENSMUST00000199986 625 ntBASIC1.82□□□□□ -2.12
Usp28Q5I043 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.82□□□□□ -2.12
Usp28Q5I043 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC1.82□□□□□ -2.12
Usp28Q5I043 Gm45344-201ENSMUST00000211610 341 ntBASIC1.82□□□□□ -2.12
Usp28Q5I043 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC1.82□□□□□ -2.12
Usp28Q5I043 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Usp28Q5I043 Gm25579-201ENSMUST00000083407 106 ntBASIC1.82□□□□□ -2.12
Usp28Q5I043 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Usp28Q5I043 AC122828.3-201ENSMUST00000223019 3915 ntBASIC1.82□□□□□ -2.12
Usp28Q5I043 Mir758-201ENSMUST00000103260 81 ntBASIC1.81□□□□□ -2.12
Usp28Q5I043 Mdga2-203ENSMUST00000113942 423 ntBASIC1.81□□□□□ -2.12
Usp28Q5I043 Mir3096-201ENSMUST00000116685 71 ntBASIC1.81□□□□□ -2.12
Usp28Q5I043 Gm13457-201ENSMUST00000117885 267 ntBASIC1.81□□□□□ -2.12
Usp28Q5I043 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.81□□□□□ -2.12
Usp28Q5I043 Gm23043-201ENSMUST00000157890 109 ntBASIC1.81□□□□□ -2.12
Usp28Q5I043 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.81□□□□□ -2.12
Usp28Q5I043 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Usp28Q5I043 Mir7226-201ENSMUST00000184953 60 ntBASIC1.81□□□□□ -2.12
Usp28Q5I043 Gm43680-201ENSMUST00000199466 340 ntBASIC1.81□□□□□ -2.12
Usp28Q5I043 Gm44256-201ENSMUST00000203304 335 ntBASIC1.81□□□□□ -2.12
Usp28Q5I043 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC1.81□□□□□ -2.12
Usp28Q5I043 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.81□□□□□ -2.12
Usp28Q5I043 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Usp28Q5I043 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Usp28Q5I043 Gm37642-201ENSMUST00000193166 1735 ntBASIC1.8□□□□□ -2.12
Usp28Q5I043 Gm22328-201ENSMUST00000158074 112 ntBASIC1.8□□□□□ -2.12
Usp28Q5I043 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.8□□□□□ -2.12
Usp28Q5I043 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Usp28Q5I043 Mir6352-201ENSMUST00000184495 116 ntBASIC1.8□□□□□ -2.12
Usp28Q5I043 Gm27991-201ENSMUST00000184804 137 ntBASIC1.8□□□□□ -2.12
Usp28Q5I043 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC1.8□□□□□ -2.12
Usp28Q5I043 Gm18433-201ENSMUST00000192747 197 ntBASIC1.8□□□□□ -2.12
Usp28Q5I043 Trav5d-2-201ENSMUST00000196107 275 ntBASIC1.8□□□□□ -2.12
Usp28Q5I043 Trav5n-2-201ENSMUST00000197136 275 ntBASIC1.8□□□□□ -2.12
Usp28Q5I043 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.8□□□□□ -2.12
Usp28Q5I043 Gm44024-201ENSMUST00000203008 476 ntBASIC1.8□□□□□ -2.12
Usp28Q5I043 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.8□□□□□ -2.12
Usp28Q5I043 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Usp28Q5I043 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Usp28Q5I043 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
Usp28Q5I043 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Usp28Q5I043 Gm13714-201ENSMUST00000117313 221 ntBASIC1.79□□□□□ -2.12
Usp28Q5I043 Gm12646-201ENSMUST00000119144 238 ntBASIC1.79□□□□□ -2.12
Usp28Q5I043 Gm11512-201ENSMUST00000119669 663 ntBASIC1.79□□□□□ -2.12
Usp28Q5I043 Gm12304-201ENSMUST00000120312 385 ntBASIC1.79□□□□□ -2.12
Usp28Q5I043 Gm14775-201ENSMUST00000122089 310 ntBASIC1.79□□□□□ -2.12
Usp28Q5I043 Gm24858-201ENSMUST00000158058 323 ntBASIC1.79□□□□□ -2.12
Usp28Q5I043 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.79□□□□□ -2.12
Usp28Q5I043 Gm26180-201ENSMUST00000179942 107 ntBASIC1.79□□□□□ -2.12
Usp28Q5I043 Gm43739-201ENSMUST00000198294 307 ntBASIC1.79□□□□□ -2.12
Usp28Q5I043 Gm43978-201ENSMUST00000203491 451 ntBASIC1.79□□□□□ -2.12
Usp28Q5I043 Gm43865-201ENSMUST00000204721 127 ntBASIC1.79□□□□□ -2.12
Usp28Q5I043 Gm45150-201ENSMUST00000206051 467 ntBASIC1.79□□□□□ -2.12
Usp28Q5I043 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC1.79□□□□□ -2.12
Usp28Q5I043 Gm9318-201ENSMUST00000222444 438 ntBASIC1.79□□□□□ -2.12
Usp28Q5I043 AC104832.1-201ENSMUST00000222938 550 ntBASIC1.79□□□□□ -2.12
Usp28Q5I043 AC117202.2-201ENSMUST00000226491 1101 ntBASIC1.79□□□□□ -2.12
Usp28Q5I043 Gm23627-201ENSMUST00000082459 107 ntBASIC1.79□□□□□ -2.12
Usp28Q5I043 Gm22502-201ENSMUST00000082488 107 ntBASIC1.79□□□□□ -2.12
Usp28Q5I043 Gm22977-201ENSMUST00000082615 107 ntBASIC1.79□□□□□ -2.12
Usp28Q5I043 Gm24149-201ENSMUST00000082757 107 ntBASIC1.79□□□□□ -2.12
Usp28Q5I043 Gm3867-201ENSMUST00000086108 279 ntBASIC1.79□□□□□ -2.12
Usp28Q5I043 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.79□□□□□ -2.12
Usp28Q5I043 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Usp28Q5I043 Gm45461-201ENSMUST00000211726 4535 ntBASIC1.79□□□□□ -2.12
Usp28Q5I043 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC1.78□□□□□ -2.12
Usp28Q5I043 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.78□□□□□ -2.12
Usp28Q5I043 Gm23950-201ENSMUST00000104026 129 ntBASIC1.78□□□□□ -2.12
Usp28Q5I043 Gm24172-201ENSMUST00000104127 117 ntBASIC1.78□□□□□ -2.12
Usp28Q5I043 Gm7164-201ENSMUST00000117503 450 ntBASIC1.78□□□□□ -2.12
Usp28Q5I043 Gm13439-201ENSMUST00000117541 409 ntBASIC1.78□□□□□ -2.12
Usp28Q5I043 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC1.78□□□□□ -2.12
Usp28Q5I043 Gm14287-201ENSMUST00000121060 117 ntBASIC1.78□□□□□ -2.12
Usp28Q5I043 Gm25961-201ENSMUST00000157174 135 ntBASIC1.78□□□□□ -2.12
Usp28Q5I043 Gm25054-201ENSMUST00000157370 97 ntBASIC1.78□□□□□ -2.12
Usp28Q5I043 Gm25020-201ENSMUST00000178071 107 ntBASIC1.78□□□□□ -2.12
Usp28Q5I043 Gm36953-201ENSMUST00000195295 268 ntBASIC1.78□□□□□ -2.12
Usp28Q5I043 Gm24623-201ENSMUST00000082616 194 ntBASIC1.78□□□□□ -2.12
Usp28Q5I043 Gm26457-201ENSMUST00000082678 78 ntBASIC1.78□□□□□ -2.12
Usp28Q5I043 Gm23453-201ENSMUST00000083326 106 ntBASIC1.78□□□□□ -2.12
Usp28Q5I043 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC1.78□□□□□ -2.12
Usp28Q5I043 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.78□□□□□ -2.13
Usp28Q5I043 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.77□□□□□ -2.13
Usp28Q5I043 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Usp28Q5I043 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Usp28Q5I043 Gm15067-201ENSMUST00000119534 156 ntBASIC1.77□□□□□ -2.13
Usp28Q5I043 Cox20-ps-201ENSMUST00000119872 353 ntBASIC1.77□□□□□ -2.13
Usp28Q5I043 Gm14402-201ENSMUST00000122217 508 ntBASIC1.77□□□□□ -2.13
Usp28Q5I043 Mir3103-201ENSMUST00000175474 67 ntBASIC1.77□□□□□ -2.13
Usp28Q5I043 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC1.77□□□□□ -2.13
Usp28Q5I043 Gm19932-201ENSMUST00000177033 313 ntBASIC1.77□□□□□ -2.13
Usp28Q5I043 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
Usp28Q5I043 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
Usp28Q5I043 Mir7215-201ENSMUST00000200383 51 ntBASIC1.77□□□□□ -2.13
Usp28Q5I043 AC159619.2-201ENSMUST00000222924 401 ntBASIC1.77□□□□□ -2.13
Usp28Q5I043 Gm25801-201ENSMUST00000082638 106 ntBASIC1.77□□□□□ -2.13
Usp28Q5I043 AC133079.1-201ENSMUST00000220943 1881 ntBASIC1.77□□□□□ -2.13
Usp28Q5I043 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.77□□□□□ -2.13
Usp28Q5I043 Gm22761-201ENSMUST00000102278 96 ntBASIC1.76□□□□□ -2.13
Usp28Q5I043 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms