Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Snord116l16-201ENSMUST00000178777 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Gm23313-201ENSMUST00000178931 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Snord116l17-201ENSMUST00000178936 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Gm23089-201ENSMUST00000178947 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Snord116l10-201ENSMUST00000179053 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Gm24153-201ENSMUST00000179280 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Gm25597-201ENSMUST00000179388 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Snord116l1-201ENSMUST00000179518 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Gm25816-201ENSMUST00000179764 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Snord116l8-201ENSMUST00000179889 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Snord116l7-201ENSMUST00000179895 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Snord116l5-201ENSMUST00000179927 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Snord116l6-201ENSMUST00000179955 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Gm26188-201ENSMUST00000179963 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Gm26433-201ENSMUST00000180227 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Snord116l11-201ENSMUST00000180312 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Gm22128-201ENSMUST00000180346 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Gm6105-201ENSMUST00000200580 624 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Gm45614-201ENSMUST00000209994 721 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Gm9795-201ENSMUST00000062156 693 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Gm13992-201ENSMUST00000120558 156 ntBASIC-0.23□□□□□ -2.45
Ccdc88bQ4QRL3 n-R5s70-201ENSMUST00000122650 116 ntBASIC-0.23□□□□□ -2.45
Ccdc88bQ4QRL3 Gm22338-201ENSMUST00000157715 129 ntBASIC-0.23□□□□□ -2.45
Ccdc88bQ4QRL3 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.23□□□□□ -2.45
Ccdc88bQ4QRL3 Gm27289-201ENSMUST00000183341 82 ntBASIC-0.23□□□□□ -2.45
Ccdc88bQ4QRL3 Gm29613-201ENSMUST00000185846 313 ntBASIC-0.23□□□□□ -2.45
Ccdc88bQ4QRL3 Gm29544-201ENSMUST00000188860 313 ntBASIC-0.23□□□□□ -2.45
Ccdc88bQ4QRL3 Gm28808-201ENSMUST00000190978 313 ntBASIC-0.23□□□□□ -2.45
Ccdc88bQ4QRL3 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC-0.23□□□□□ -2.45
Ccdc88bQ4QRL3 AC162931.1-201ENSMUST00000214184 267 ntBASIC-0.23□□□□□ -2.45
Ccdc88bQ4QRL3 AC160863.1-201ENSMUST00000218412 317 ntBASIC-0.23□□□□□ -2.45
Ccdc88bQ4QRL3 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC-0.24□□□□□ -2.45
Ccdc88bQ4QRL3 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.24□□□□□ -2.45
Ccdc88bQ4QRL3 Gm46193-201ENSMUST00000219399 364 ntBASIC-0.24□□□□□ -2.45
Ccdc88bQ4QRL3 Gm26206-201ENSMUST00000082908 110 ntBASIC-0.24□□□□□ -2.45
Ccdc88bQ4QRL3 Gm15211-201ENSMUST00000118932 528 ntBASIC-0.25□□□□□ -2.45
Ccdc88bQ4QRL3 Gm14554-201ENSMUST00000119548 661 ntBASIC-0.25□□□□□ -2.45
Ccdc88bQ4QRL3 Gm24419-201ENSMUST00000157875 332 ntBASIC-0.25□□□□□ -2.45
Ccdc88bQ4QRL3 Gm25413-201ENSMUST00000158544 312 ntBASIC-0.25□□□□□ -2.45
Ccdc88bQ4QRL3 Gm24552-201ENSMUST00000158646 103 ntBASIC-0.25□□□□□ -2.45
Ccdc88bQ4QRL3 Mir6338-201ENSMUST00000183389 109 ntBASIC-0.25□□□□□ -2.45
Ccdc88bQ4QRL3 Gm28001-201ENSMUST00000183561 117 ntBASIC-0.25□□□□□ -2.45
Ccdc88bQ4QRL3 Gm28995-201ENSMUST00000186625 261 ntBASIC-0.25□□□□□ -2.45
Ccdc88bQ4QRL3 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC-0.25□□□□□ -2.45
Ccdc88bQ4QRL3 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC-0.25□□□□□ -2.45
Ccdc88bQ4QRL3 Snord1a-201ENSMUST00000083160 74 ntBASIC-0.25□□□□□ -2.45
Ccdc88bQ4QRL3 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC-0.25□□□□□ -2.45
Ccdc88bQ4QRL3 Gm42718-201ENSMUST00000197319 2681 ntBASIC-0.26□□□□□ -2.45
Ccdc88bQ4QRL3 Gm14795-201ENSMUST00000118461 471 ntBASIC-0.26□□□□□ -2.45
Ccdc88bQ4QRL3 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC-0.26□□□□□ -2.45
Ccdc88bQ4QRL3 Gm37934-201ENSMUST00000192902 402 ntBASIC-0.26□□□□□ -2.45
Ccdc88bQ4QRL3 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC-0.26□□□□□ -2.45
Ccdc88bQ4QRL3 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC-0.26□□□□□ -2.45
Ccdc88bQ4QRL3 Gm22685-201ENSMUST00000082848 106 ntBASIC-0.26□□□□□ -2.45
Ccdc88bQ4QRL3 Mirlet7g-201ENSMUST00000083506 88 ntBASIC-0.26□□□□□ -2.45
Ccdc88bQ4QRL3 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC-0.26□□□□□ -2.45
Ccdc88bQ4QRL3 Gm14400-201ENSMUST00000117234 2135 ntBASIC-0.26□□□□□ -2.45
Ccdc88bQ4QRL3 Mir8107-201ENSMUST00000184024 117 ntBASIC-0.27□□□□□ -2.45
Ccdc88bQ4QRL3 Gm37586-201ENSMUST00000193654 204 ntBASIC-0.27□□□□□ -2.45
Ccdc88bQ4QRL3 Gm20144-201ENSMUST00000203031 165 ntBASIC-0.27□□□□□ -2.45
Ccdc88bQ4QRL3 AC166830.2-201ENSMUST00000225821 196 ntBASIC-0.27□□□□□ -2.45
Ccdc88bQ4QRL3 Gm25851-201ENSMUST00000082794 107 ntBASIC-0.27□□□□□ -2.45
Ccdc88bQ4QRL3 Gm37642-201ENSMUST00000193166 1735 ntBASIC-0.27□□□□□ -2.45
Ccdc88bQ4QRL3 Gm14445-201ENSMUST00000117051 1484 ntBASIC-0.28□□□□□ -2.45
Ccdc88bQ4QRL3 Gm11410-201ENSMUST00000120053 1143 ntBASIC-0.28□□□□□ -2.45
Ccdc88bQ4QRL3 Gm24716-201ENSMUST00000157524 104 ntBASIC-0.28□□□□□ -2.45
Ccdc88bQ4QRL3 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC-0.28□□□□□ -2.45
Ccdc88bQ4QRL3 Gm34783-201ENSMUST00000209159 303 ntBASIC-0.28□□□□□ -2.45
Ccdc88bQ4QRL3 AC147240.1-201ENSMUST00000218767 431 ntBASIC-0.28□□□□□ -2.45
Ccdc88bQ4QRL3 AC167229.1-201ENSMUST00000220057 469 ntBASIC-0.28□□□□□ -2.45
Ccdc88bQ4QRL3 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC-0.28□□□□□ -2.45
Ccdc88bQ4QRL3 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC-0.28□□□□□ -2.45
Ccdc88bQ4QRL3 Gm24846-201ENSMUST00000158033 108 ntBASIC-0.29□□□□□ -2.46
Ccdc88bQ4QRL3 Gm23617-201ENSMUST00000175410 95 ntBASIC-0.29□□□□□ -2.46
Ccdc88bQ4QRL3 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC-0.29□□□□□ -2.46
Ccdc88bQ4QRL3 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC-0.29□□□□□ -2.46
Ccdc88bQ4QRL3 Gm45541-201ENSMUST00000210443 54 ntBASIC-0.29□□□□□ -2.46
Ccdc88bQ4QRL3 Gm19709-201ENSMUST00000215403 482 ntBASIC-0.29□□□□□ -2.46
Ccdc88bQ4QRL3 Gm24038-201ENSMUST00000082872 159 ntBASIC-0.29□□□□□ -2.46
Ccdc88bQ4QRL3 Gm12080-201ENSMUST00000119821 1883 ntBASIC-0.29□□□□□ -2.46
Ccdc88bQ4QRL3 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.29□□□□□ -2.46
Ccdc88bQ4QRL3 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC-0.29□□□□□ -2.46
Ccdc88bQ4QRL3 Gm22967-201ENSMUST00000157956 239 ntBASIC-0.29□□□□□ -2.46
Ccdc88bQ4QRL3 Gm24056-201ENSMUST00000158617 146 ntBASIC-0.29□□□□□ -2.46
Ccdc88bQ4QRL3 Gm22668-201ENSMUST00000158716 260 ntBASIC-0.29□□□□□ -2.46
Ccdc88bQ4QRL3 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
Ccdc88bQ4QRL3 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC-0.29□□□□□ -2.46
Ccdc88bQ4QRL3 Gm37869-201ENSMUST00000193385 595 ntBASIC-0.29□□□□□ -2.46
Ccdc88bQ4QRL3 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC-0.29□□□□□ -2.46
Ccdc88bQ4QRL3 AC125532.1-201ENSMUST00000216210 2334 ntBASIC-0.29□□□□□ -2.46
Ccdc88bQ4QRL3 AC126043.1-201ENSMUST00000221304 1141 ntBASIC-0.29□□□□□ -2.46
Ccdc88bQ4QRL3 Gm23246-201ENSMUST00000083371 67 ntBASIC-0.29□□□□□ -2.46
Ccdc88bQ4QRL3 Mir19b-2-201ENSMUST00000083539 84 ntBASIC-0.29□□□□□ -2.46
Ccdc88bQ4QRL3 Gm36989-201ENSMUST00000193225 2160 ntBASIC-0.3□□□□□ -2.46
Ccdc88bQ4QRL3 Gm26147-201ENSMUST00000104479 114 ntBASIC-0.3□□□□□ -2.46
Ccdc88bQ4QRL3 Gm12806-201ENSMUST00000119384 268 ntBASIC-0.3□□□□□ -2.46
Ccdc88bQ4QRL3 Gm11252-201ENSMUST00000120572 939 ntBASIC-0.3□□□□□ -2.46
Ccdc88bQ4QRL3 Gm22755-201ENSMUST00000157143 100 ntBASIC-0.3□□□□□ -2.46
Ccdc88bQ4QRL3 Ear-ps8-201ENSMUST00000161935 354 ntBASIC-0.3□□□□□ -2.46
Ccdc88bQ4QRL3 Mir7667-201ENSMUST00000183866 63 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms