Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC2.05□□□□□ -2.08
Trim40Q3UWA4 AC102369.1-201ENSMUST00000218415 373 ntBASIC2.05□□□□□ -2.08
Trim40Q3UWA4 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC2.05□□□□□ -2.08
Trim40Q3UWA4 AC158981.3-202ENSMUST00000228906 523 ntBASIC2.05□□□□□ -2.08
Trim40Q3UWA4 mt-Tr-201ENSMUST00000082412 68 ntBASIC2.05□□□□□ -2.08
Trim40Q3UWA4 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.05□□□□□ -2.08
Trim40Q3UWA4 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
Trim40Q3UWA4 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
Trim40Q3UWA4 Gm24282-201ENSMUST00000104232 66 ntBASIC2.04□□□□□ -2.08
Trim40Q3UWA4 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Trim40Q3UWA4 Gm24907-201ENSMUST00000116932 128 ntBASIC2.04□□□□□ -2.08
Trim40Q3UWA4 Gm14774-201ENSMUST00000117857 536 ntBASIC2.04□□□□□ -2.08
Trim40Q3UWA4 Gm12646-201ENSMUST00000119144 238 ntBASIC2.04□□□□□ -2.08
Trim40Q3UWA4 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC2.04□□□□□ -2.08
Trim40Q3UWA4 Gm24005-201ENSMUST00000158459 296 ntBASIC2.04□□□□□ -2.08
Trim40Q3UWA4 Gm23793-201ENSMUST00000179396 117 ntBASIC2.04□□□□□ -2.08
Trim40Q3UWA4 Mir6355-201ENSMUST00000183687 106 ntBASIC2.04□□□□□ -2.08
Trim40Q3UWA4 Mir6346-201ENSMUST00000183982 81 ntBASIC2.04□□□□□ -2.08
Trim40Q3UWA4 Gm43865-201ENSMUST00000204721 127 ntBASIC2.04□□□□□ -2.08
Trim40Q3UWA4 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.04□□□□□ -2.08
Trim40Q3UWA4 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.04□□□□□ -2.08
Trim40Q3UWA4 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Trim40Q3UWA4 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.04□□□□□ -2.08
Trim40Q3UWA4 AC122393.1-201ENSMUST00000226570 319 ntBASIC2.04□□□□□ -2.08
Trim40Q3UWA4 AC163646.2-201ENSMUST00000227962 141 ntBASIC2.04□□□□□ -2.08
Trim40Q3UWA4 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Trim40Q3UWA4 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
Trim40Q3UWA4 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.03□□□□□ -2.08
Trim40Q3UWA4 Gm13339-201ENSMUST00000120651 510 ntBASIC2.03□□□□□ -2.08
Trim40Q3UWA4 Gm25625-201ENSMUST00000157221 96 ntBASIC2.03□□□□□ -2.08
Trim40Q3UWA4 Gm23024-201ENSMUST00000158770 292 ntBASIC2.03□□□□□ -2.08
Trim40Q3UWA4 Gm20660-201ENSMUST00000177515 289 ntBASIC2.03□□□□□ -2.08
Trim40Q3UWA4 Gm21978-201ENSMUST00000179696 377 ntBASIC2.03□□□□□ -2.08
Trim40Q3UWA4 Gm27760-201ENSMUST00000185048 114 ntBASIC2.03□□□□□ -2.08
Trim40Q3UWA4 Gm44337-201ENSMUST00000196553 114 ntBASIC2.03□□□□□ -2.08
Trim40Q3UWA4 Gm3724-201ENSMUST00000197957 349 ntBASIC2.03□□□□□ -2.08
Trim40Q3UWA4 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.03□□□□□ -2.08
Trim40Q3UWA4 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.03□□□□□ -2.08
Trim40Q3UWA4 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC2.03□□□□□ -2.08
Trim40Q3UWA4 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC2.03□□□□□ -2.08
Trim40Q3UWA4 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Trim40Q3UWA4 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.09
Trim40Q3UWA4 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
Trim40Q3UWA4 Gm15088-201ENSMUST00000117973 1508 ntBASIC2.02□□□□□ -2.09
Trim40Q3UWA4 Gm15098-201ENSMUST00000119036 1508 ntBASIC2.02□□□□□ -2.09
Trim40Q3UWA4 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.02□□□□□ -2.09
Trim40Q3UWA4 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Trim40Q3UWA4 Mdga2-203ENSMUST00000113942 423 ntBASIC2.02□□□□□ -2.09
Trim40Q3UWA4 Gm13439-201ENSMUST00000117541 409 ntBASIC2.02□□□□□ -2.09
Trim40Q3UWA4 Gm12235-201ENSMUST00000118596 170 ntBASIC2.02□□□□□ -2.09
Trim40Q3UWA4 Gm24892-201ENSMUST00000122747 104 ntBASIC2.02□□□□□ -2.09
Trim40Q3UWA4 Gm22085-201ENSMUST00000158344 110 ntBASIC2.02□□□□□ -2.09
Trim40Q3UWA4 Gm24737-201ENSMUST00000158861 100 ntBASIC2.02□□□□□ -2.09
Trim40Q3UWA4 Gm20462-201ENSMUST00000172623 408 ntBASIC2.02□□□□□ -2.09
Trim40Q3UWA4 Gm24388-201ENSMUST00000177872 107 ntBASIC2.02□□□□□ -2.09
Trim40Q3UWA4 Gm29397-201ENSMUST00000185205 333 ntBASIC2.02□□□□□ -2.09
Trim40Q3UWA4 Gm28282-201ENSMUST00000186072 186 ntBASIC2.02□□□□□ -2.09
Trim40Q3UWA4 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.02□□□□□ -2.09
Trim40Q3UWA4 Gm20257-202ENSMUST00000188643 130 ntBASIC2.02□□□□□ -2.09
Trim40Q3UWA4 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC2.02□□□□□ -2.09
Trim40Q3UWA4 Snord42a-201ENSMUST00000082606 65 ntBASIC2.02□□□□□ -2.09
Trim40Q3UWA4 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.02□□□□□ -2.09
Trim40Q3UWA4 Gm26314-201ENSMUST00000083891 107 ntBASIC2.02□□□□□ -2.09
Trim40Q3UWA4 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC2.02□□□□□ -2.09
Trim40Q3UWA4 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Trim40Q3UWA4 Gm42755-201ENSMUST00000198533 1493 ntBASIC2.01□□□□□ -2.09
Trim40Q3UWA4 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.01□□□□□ -2.09
Trim40Q3UWA4 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Trim40Q3UWA4 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Trim40Q3UWA4 Gm22021-201ENSMUST00000104353 107 ntBASIC2.01□□□□□ -2.09
Trim40Q3UWA4 Gm14980-201ENSMUST00000121247 736 ntBASIC2.01□□□□□ -2.09
Trim40Q3UWA4 Gm23469-201ENSMUST00000157131 104 ntBASIC2.01□□□□□ -2.09
Trim40Q3UWA4 Gm24691-201ENSMUST00000157762 140 ntBASIC2.01□□□□□ -2.09
Trim40Q3UWA4 Gm22093-201ENSMUST00000158980 111 ntBASIC2.01□□□□□ -2.09
Trim40Q3UWA4 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC2.01□□□□□ -2.09
Trim40Q3UWA4 Gm25457-201ENSMUST00000179509 107 ntBASIC2.01□□□□□ -2.09
Trim40Q3UWA4 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC2.01□□□□□ -2.09
Trim40Q3UWA4 Mir7k-201ENSMUST00000184115 110 ntBASIC2.01□□□□□ -2.09
Trim40Q3UWA4 Mir6376-201ENSMUST00000185149 131 ntBASIC2.01□□□□□ -2.09
Trim40Q3UWA4 Gm44083-201ENSMUST00000203114 337 ntBASIC2.01□□□□□ -2.09
Trim40Q3UWA4 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.01□□□□□ -2.09
Trim40Q3UWA4 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.01□□□□□ -2.09
Trim40Q3UWA4 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.01□□□□□ -2.09
Trim40Q3UWA4 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2.01□□□□□ -2.09
Trim40Q3UWA4 Gm25402-201ENSMUST00000082966 131 ntBASIC2.01□□□□□ -2.09
Trim40Q3UWA4 Gm25651-201ENSMUST00000083782 119 ntBASIC2.01□□□□□ -2.09
Trim40Q3UWA4 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Trim40Q3UWA4 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Trim40Q3UWA4 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Trim40Q3UWA4 Gm14405-201ENSMUST00000117808 2330 ntBASIC2□□□□□ -2.09
Trim40Q3UWA4 Mir344c-201ENSMUST00000103919 92 ntBASIC2□□□□□ -2.09
Trim40Q3UWA4 Gm24275-201ENSMUST00000116780 146 ntBASIC2□□□□□ -2.09
Trim40Q3UWA4 Mir669d-2-201ENSMUST00000116854 86 ntBASIC2□□□□□ -2.09
Trim40Q3UWA4 Gm23987-201ENSMUST00000117039 129 ntBASIC2□□□□□ -2.09
Trim40Q3UWA4 Gm15010-201ENSMUST00000117153 407 ntBASIC2□□□□□ -2.09
Trim40Q3UWA4 n-R5s189-201ENSMUST00000122675 114 ntBASIC2□□□□□ -2.09
Trim40Q3UWA4 Gm15281-201ENSMUST00000125181 351 ntBASIC2□□□□□ -2.09
Trim40Q3UWA4 Gm25460-201ENSMUST00000157954 127 ntBASIC2□□□□□ -2.09
Trim40Q3UWA4 Gm22535-201ENSMUST00000158174 119 ntBASIC2□□□□□ -2.09
Trim40Q3UWA4 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC2□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms