Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Trafd1Q3UDK1 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Trafd1Q3UDK1 Gm14296-202ENSMUST00000108931 750 ntBASIC2.01□□□□□ -2.09
Trafd1Q3UDK1 Gm22032-201ENSMUST00000116946 116 ntBASIC2.01□□□□□ -2.09
Trafd1Q3UDK1 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.01□□□□□ -2.09
Trafd1Q3UDK1 Gm23230-201ENSMUST00000157298 133 ntBASIC2.01□□□□□ -2.09
Trafd1Q3UDK1 Gm24601-201ENSMUST00000157970 143 ntBASIC2.01□□□□□ -2.09
Trafd1Q3UDK1 Gm22803-201ENSMUST00000158049 283 ntBASIC2.01□□□□□ -2.09
Trafd1Q3UDK1 Gm25486-201ENSMUST00000158726 63 ntBASIC2.01□□□□□ -2.09
Trafd1Q3UDK1 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC2.01□□□□□ -2.09
Trafd1Q3UDK1 Gm7953-201ENSMUST00000168278 469 ntBASIC2.01□□□□□ -2.09
Trafd1Q3UDK1 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.01□□□□□ -2.09
Trafd1Q3UDK1 Gm27761-201ENSMUST00000184091 131 ntBASIC2.01□□□□□ -2.09
Trafd1Q3UDK1 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC2.01□□□□□ -2.09
Trafd1Q3UDK1 Gm28825-201ENSMUST00000186233 238 ntBASIC2.01□□□□□ -2.09
Trafd1Q3UDK1 Gm45150-201ENSMUST00000206051 467 ntBASIC2.01□□□□□ -2.09
Trafd1Q3UDK1 Gm8940-201ENSMUST00000212585 219 ntBASIC2.01□□□□□ -2.09
Trafd1Q3UDK1 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.01□□□□□ -2.09
Trafd1Q3UDK1 Gm19118-201ENSMUST00000222554 98 ntBASIC2.01□□□□□ -2.09
Trafd1Q3UDK1 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.01□□□□□ -2.09
Trafd1Q3UDK1 Mir222-201ENSMUST00000083537 79 ntBASIC2.01□□□□□ -2.09
Trafd1Q3UDK1 Gm26164-201ENSMUST00000083793 104 ntBASIC2.01□□□□□ -2.09
Trafd1Q3UDK1 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.01□□□□□ -2.09
Trafd1Q3UDK1 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Trafd1Q3UDK1 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
Trafd1Q3UDK1 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Trafd1Q3UDK1 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Trafd1Q3UDK1 Gm24098-201ENSMUST00000102075 109 ntBASIC2□□□□□ -2.09
Trafd1Q3UDK1 Gm25381-201ENSMUST00000102078 109 ntBASIC2□□□□□ -2.09
Trafd1Q3UDK1 Gm25377-201ENSMUST00000104334 129 ntBASIC2□□□□□ -2.09
Trafd1Q3UDK1 Defa-ps13-201ENSMUST00000120695 204 ntBASIC2□□□□□ -2.09
Trafd1Q3UDK1 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC2□□□□□ -2.09
Trafd1Q3UDK1 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC2□□□□□ -2.09
Trafd1Q3UDK1 Gm25827-201ENSMUST00000157089 107 ntBASIC2□□□□□ -2.09
Trafd1Q3UDK1 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2□□□□□ -2.09
Trafd1Q3UDK1 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC2□□□□□ -2.09
Trafd1Q3UDK1 Trav5d-2-201ENSMUST00000196107 275 ntBASIC2□□□□□ -2.09
Trafd1Q3UDK1 Trav5n-2-201ENSMUST00000197136 275 ntBASIC2□□□□□ -2.09
Trafd1Q3UDK1 Gm43193-201ENSMUST00000197732 441 ntBASIC2□□□□□ -2.09
Trafd1Q3UDK1 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC2□□□□□ -2.09
Trafd1Q3UDK1 Gm18453-201ENSMUST00000208000 626 ntBASIC2□□□□□ -2.09
Trafd1Q3UDK1 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC2□□□□□ -2.09
Trafd1Q3UDK1 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC2□□□□□ -2.09
Trafd1Q3UDK1 AC192333.1-201ENSMUST00000224573 376 ntBASIC2□□□□□ -2.09
Trafd1Q3UDK1 AC160962.2-201ENSMUST00000224761 632 ntBASIC2□□□□□ -2.09
Trafd1Q3UDK1 mt-Tr-201ENSMUST00000082412 68 ntBASIC2□□□□□ -2.09
Trafd1Q3UDK1 Gm24623-201ENSMUST00000082616 194 ntBASIC2□□□□□ -2.09
Trafd1Q3UDK1 Gm22365-201ENSMUST00000093750 117 ntBASIC2□□□□□ -2.09
Trafd1Q3UDK1 Gm37661-201ENSMUST00000191863 1550 ntBASIC2□□□□□ -2.09
Trafd1Q3UDK1 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Trafd1Q3UDK1 Gm15314-201ENSMUST00000120740 1887 ntBASIC1.99□□□□□ -2.09
Trafd1Q3UDK1 Gm26077-201ENSMUST00000104064 123 ntBASIC1.99□□□□□ -2.09
Trafd1Q3UDK1 Gm24172-201ENSMUST00000104127 117 ntBASIC1.99□□□□□ -2.09
Trafd1Q3UDK1 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Trafd1Q3UDK1 Gm6444-201ENSMUST00000119611 458 ntBASIC1.99□□□□□ -2.09
Trafd1Q3UDK1 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.99□□□□□ -2.09
Trafd1Q3UDK1 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC1.99□□□□□ -2.09
Trafd1Q3UDK1 Gm9830-201ENSMUST00000178509 357 ntBASIC1.99□□□□□ -2.09
Trafd1Q3UDK1 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Trafd1Q3UDK1 Mir7009-201ENSMUST00000184519 64 ntBASIC1.99□□□□□ -2.09
Trafd1Q3UDK1 Gm29229-201ENSMUST00000188874 323 ntBASIC1.99□□□□□ -2.09
Trafd1Q3UDK1 Gm37557-201ENSMUST00000191640 139 ntBASIC1.99□□□□□ -2.09
Trafd1Q3UDK1 Gm38041-201ENSMUST00000194445 661 ntBASIC1.99□□□□□ -2.09
Trafd1Q3UDK1 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.99□□□□□ -2.09
Trafd1Q3UDK1 AC122393.1-201ENSMUST00000226570 319 ntBASIC1.99□□□□□ -2.09
Trafd1Q3UDK1 Gm22866-201ENSMUST00000083947 177 ntBASIC1.99□□□□□ -2.09
Trafd1Q3UDK1 Gm3081-201ENSMUST00000193413 3025 ntBASIC1.99□□□□□ -2.09
Trafd1Q3UDK1 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Trafd1Q3UDK1 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC1.98□□□□□ -2.09
Trafd1Q3UDK1 Gm22270-201ENSMUST00000104034 132 ntBASIC1.98□□□□□ -2.09
Trafd1Q3UDK1 Gm23987-201ENSMUST00000117039 129 ntBASIC1.98□□□□□ -2.09
Trafd1Q3UDK1 Gm13378-201ENSMUST00000117483 336 ntBASIC1.98□□□□□ -2.09
Trafd1Q3UDK1 Gm12934-201ENSMUST00000119221 343 ntBASIC1.98□□□□□ -2.09
Trafd1Q3UDK1 Gm26102-201ENSMUST00000157251 284 ntBASIC1.98□□□□□ -2.09
Trafd1Q3UDK1 Gm24911-201ENSMUST00000157292 136 ntBASIC1.98□□□□□ -2.09
Trafd1Q3UDK1 Gm24504-201ENSMUST00000157679 100 ntBASIC1.98□□□□□ -2.09
Trafd1Q3UDK1 Gm22554-201ENSMUST00000157798 147 ntBASIC1.98□□□□□ -2.09
Trafd1Q3UDK1 Gm23557-201ENSMUST00000157820 138 ntBASIC1.98□□□□□ -2.09
Trafd1Q3UDK1 Gm25982-201ENSMUST00000157920 101 ntBASIC1.98□□□□□ -2.09
Trafd1Q3UDK1 Gm24846-201ENSMUST00000158033 108 ntBASIC1.98□□□□□ -2.09
Trafd1Q3UDK1 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.98□□□□□ -2.09
Trafd1Q3UDK1 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC1.98□□□□□ -2.09
Trafd1Q3UDK1 Gm20885-201ENSMUST00000190192 654 ntBASIC1.98□□□□□ -2.09
Trafd1Q3UDK1 Gm37923-201ENSMUST00000191624 161 ntBASIC1.98□□□□□ -2.09
Trafd1Q3UDK1 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC1.98□□□□□ -2.09
Trafd1Q3UDK1 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC1.98□□□□□ -2.09
Trafd1Q3UDK1 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC1.98□□□□□ -2.09
Trafd1Q3UDK1 Gm43512-201ENSMUST00000198495 176 ntBASIC1.98□□□□□ -2.09
Trafd1Q3UDK1 Gm44811-201ENSMUST00000209120 228 ntBASIC1.98□□□□□ -2.09
Trafd1Q3UDK1 Gm45704-201ENSMUST00000212582 403 ntBASIC1.98□□□□□ -2.09
Trafd1Q3UDK1 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Trafd1Q3UDK1 Mir30d-201ENSMUST00000083503 82 ntBASIC1.98□□□□□ -2.09
Trafd1Q3UDK1 Gm24765-201ENSMUST00000083691 103 ntBASIC1.98□□□□□ -2.09
Trafd1Q3UDK1 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.98□□□□□ -2.09
Trafd1Q3UDK1 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Trafd1Q3UDK1 Gm24582-201ENSMUST00000103967 103 ntBASIC1.97□□□□□ -2.09
Trafd1Q3UDK1 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Trafd1Q3UDK1 Gm22151-201ENSMUST00000116963 58 ntBASIC1.97□□□□□ -2.09
Trafd1Q3UDK1 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.97□□□□□ -2.09
Trafd1Q3UDK1 Gm27926-201ENSMUST00000157180 66 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms