Protein–RNA interactions for Protein: Q3U319

Rnf40, E3 ubiquitin-protein ligase BRE1B, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40Q3U319 Gm25289-201ENSMUST00000122799 119 ntBASIC4.33□□□□□ -1.72
Rnf40Q3U319 Gm25910-201ENSMUST00000157620 140 ntBASIC4.33□□□□□ -1.72
Rnf40Q3U319 Gm27396-201ENSMUST00000157708 58 ntBASIC4.33□□□□□ -1.72
Rnf40Q3U319 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Rnf40Q3U319 Mir6715-201ENSMUST00000184990 57 ntBASIC4.33□□□□□ -1.72
Rnf40Q3U319 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC4.33□□□□□ -1.72
Rnf40Q3U319 Gm37377-201ENSMUST00000191733 304 ntBASIC4.33□□□□□ -1.72
Rnf40Q3U319 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC4.33□□□□□ -1.72
Rnf40Q3U319 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC4.33□□□□□ -1.72
Rnf40Q3U319 Mir19b-2-201ENSMUST00000083539 84 ntBASIC4.33□□□□□ -1.72
Rnf40Q3U319 Gm23796-201ENSMUST00000084011 160 ntBASIC4.33□□□□□ -1.72
Rnf40Q3U319 n-R5s13-201ENSMUST00000093707 119 ntBASIC4.33□□□□□ -1.72
Rnf40Q3U319 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Rnf40Q3U319 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Rnf40Q3U319 Gm43046-201ENSMUST00000198771 2451 ntBASIC4.33□□□□□ -1.72
Rnf40Q3U319 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Rnf40Q3U319 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Rnf40Q3U319 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Rnf40Q3U319 Defa-ps15-201ENSMUST00000118178 477 ntBASIC4.32□□□□□ -1.72
Rnf40Q3U319 Gm15120-201ENSMUST00000120602 301 ntBASIC4.32□□□□□ -1.72
Rnf40Q3U319 Gm24595-201ENSMUST00000122501 110 ntBASIC4.32□□□□□ -1.72
Rnf40Q3U319 Gm23534-201ENSMUST00000157539 97 ntBASIC4.32□□□□□ -1.72
Rnf40Q3U319 Mir1946b-201ENSMUST00000157853 133 ntBASIC4.32□□□□□ -1.72
Rnf40Q3U319 Mir6943-201ENSMUST00000185186 66 ntBASIC4.32□□□□□ -1.72
Rnf40Q3U319 Gm37050-201ENSMUST00000193464 466 ntBASIC4.32□□□□□ -1.72
Rnf40Q3U319 Gm44326-201ENSMUST00000198226 101 ntBASIC4.32□□□□□ -1.72
Rnf40Q3U319 Mir7682-201ENSMUST00000198467 58 ntBASIC4.32□□□□□ -1.72
Rnf40Q3U319 Gm44256-201ENSMUST00000203304 335 ntBASIC4.32□□□□□ -1.72
Rnf40Q3U319 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Rnf40Q3U319 Gm43256-201ENSMUST00000199995 3091 ntBASIC4.32□□□□□ -1.72
Rnf40Q3U319 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Rnf40Q3U319 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Rnf40Q3U319 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Rnf40Q3U319 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Rnf40Q3U319 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Rnf40Q3U319 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.31□□□□□ -1.72
Rnf40Q3U319 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Rnf40Q3U319 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Rnf40Q3U319 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Rnf40Q3U319 Gm24096-201ENSMUST00000103905 110 ntBASIC4.31□□□□□ -1.72
Rnf40Q3U319 Gm24582-201ENSMUST00000103967 103 ntBASIC4.31□□□□□ -1.72
Rnf40Q3U319 Gm14502-201ENSMUST00000118154 113 ntBASIC4.31□□□□□ -1.72
Rnf40Q3U319 Gm12513-201ENSMUST00000118617 352 ntBASIC4.31□□□□□ -1.72
Rnf40Q3U319 Gm16327-201ENSMUST00000137146 228 ntBASIC4.31□□□□□ -1.72
Rnf40Q3U319 Gm22156-201ENSMUST00000158409 141 ntBASIC4.31□□□□□ -1.72
Rnf40Q3U319 Gm23194-201ENSMUST00000158813 105 ntBASIC4.31□□□□□ -1.72
Rnf40Q3U319 Gm24388-201ENSMUST00000177872 107 ntBASIC4.31□□□□□ -1.72
Rnf40Q3U319 Gm22243-201ENSMUST00000178754 120 ntBASIC4.31□□□□□ -1.72
Rnf40Q3U319 Mir6926-201ENSMUST00000184562 68 ntBASIC4.31□□□□□ -1.72
Rnf40Q3U319 Gm9238-201ENSMUST00000196181 329 ntBASIC4.31□□□□□ -1.72
Rnf40Q3U319 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC4.31□□□□□ -1.72
Rnf40Q3U319 AC142499.1-201ENSMUST00000220036 374 ntBASIC4.31□□□□□ -1.72
Rnf40Q3U319 AC118006.1-201ENSMUST00000224211 501 ntBASIC4.31□□□□□ -1.72
Rnf40Q3U319 AC149294.9-201ENSMUST00000227256 164 ntBASIC4.31□□□□□ -1.72
Rnf40Q3U319 Gm26493-201ENSMUST00000083155 136 ntBASIC4.31□□□□□ -1.72
Rnf40Q3U319 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Rnf40Q3U319 AC160984.1-201ENSMUST00000225855 3154 ntBASIC4.31□□□□□ -1.72
Rnf40Q3U319 Gm43958-201ENSMUST00000204360 3544 ntBASIC4.31□□□□□ -1.72
Rnf40Q3U319 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Rnf40Q3U319 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Rnf40Q3U319 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Rnf40Q3U319 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Rnf40Q3U319 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Rnf40Q3U319 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Rnf40Q3U319 Gm23063-201ENSMUST00000102350 93 ntBASIC4.3□□□□□ -1.72
Rnf40Q3U319 Gm44489-201ENSMUST00000104619 97 ntBASIC4.3□□□□□ -1.72
Rnf40Q3U319 Gm7123-201ENSMUST00000117647 213 ntBASIC4.3□□□□□ -1.72
Rnf40Q3U319 Gm15289-201ENSMUST00000117793 244 ntBASIC4.3□□□□□ -1.72
Rnf40Q3U319 Gm15365-201ENSMUST00000122392 300 ntBASIC4.3□□□□□ -1.72
Rnf40Q3U319 Gm16345-201ENSMUST00000146065 158 ntBASIC4.3□□□□□ -1.72
Rnf40Q3U319 Gm22870-201ENSMUST00000157501 112 ntBASIC4.3□□□□□ -1.72
Rnf40Q3U319 Gm23700-201ENSMUST00000158842 102 ntBASIC4.3□□□□□ -1.72
Rnf40Q3U319 Gm25367-201ENSMUST00000158846 106 ntBASIC4.3□□□□□ -1.72
Rnf40Q3U319 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Rnf40Q3U319 Gm37330-201ENSMUST00000192606 153 ntBASIC4.3□□□□□ -1.72
Rnf40Q3U319 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC4.3□□□□□ -1.72
Rnf40Q3U319 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC4.3□□□□□ -1.72
Rnf40Q3U319 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC4.3□□□□□ -1.72
Rnf40Q3U319 Gm44757-201ENSMUST00000206373 157 ntBASIC4.3□□□□□ -1.72
Rnf40Q3U319 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.3□□□□□ -1.72
Rnf40Q3U319 Gm23509-201ENSMUST00000083080 160 ntBASIC4.3□□□□□ -1.72
Rnf40Q3U319 Gm23850-201ENSMUST00000083830 169 ntBASIC4.3□□□□□ -1.72
Rnf40Q3U319 Gm22350-201ENSMUST00000083924 156 ntBASIC4.3□□□□□ -1.72
Rnf40Q3U319 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Rnf40Q3U319 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Rnf40Q3U319 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Rnf40Q3U319 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Rnf40Q3U319 Gm18751-201ENSMUST00000185777 2013 ntBASIC4.29□□□□□ -1.72
Rnf40Q3U319 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Rnf40Q3U319 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Rnf40Q3U319 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Rnf40Q3U319 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Rnf40Q3U319 Snord100-201ENSMUST00000116836 74 ntBASIC4.29□□□□□ -1.72
Rnf40Q3U319 Gm8200-201ENSMUST00000122390 222 ntBASIC4.29□□□□□ -1.72
Rnf40Q3U319 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.29□□□□□ -1.72
Rnf40Q3U319 Gm23957-201ENSMUST00000157209 90 ntBASIC4.29□□□□□ -1.72
Rnf40Q3U319 Gm24251-201ENSMUST00000157324 114 ntBASIC4.29□□□□□ -1.72
Rnf40Q3U319 Gm22560-201ENSMUST00000157332 120 ntBASIC4.29□□□□□ -1.72
Rnf40Q3U319 Gm22228-201ENSMUST00000157364 101 ntBASIC4.29□□□□□ -1.72
Rnf40Q3U319 Gm22540-201ENSMUST00000158168 117 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms