Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm27997-201ENSMUST00000184942 69 ntBASIC3.48□□□□□ -1.85
Ddb1Q3U1J4 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Ddb1Q3U1J4 Gm37801-201ENSMUST00000194754 274 ntBASIC3.48□□□□□ -1.85
Ddb1Q3U1J4 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC3.48□□□□□ -1.85
Ddb1Q3U1J4 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC3.48□□□□□ -1.85
Ddb1Q3U1J4 Gm25202-201ENSMUST00000082838 191 ntBASIC3.48□□□□□ -1.85
Ddb1Q3U1J4 Gm23727-201ENSMUST00000083352 164 ntBASIC3.48□□□□□ -1.85
Ddb1Q3U1J4 Gm25896-201ENSMUST00000083713 136 ntBASIC3.48□□□□□ -1.85
Ddb1Q3U1J4 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
Ddb1Q3U1J4 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Ddb1Q3U1J4 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Ddb1Q3U1J4 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
Ddb1Q3U1J4 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Ddb1Q3U1J4 Gm24670-201ENSMUST00000104154 132 ntBASIC3.47□□□□□ -1.85
Ddb1Q3U1J4 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Ddb1Q3U1J4 Gm14843-201ENSMUST00000119596 212 ntBASIC3.47□□□□□ -1.85
Ddb1Q3U1J4 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC3.47□□□□□ -1.85
Ddb1Q3U1J4 Gm23829-201ENSMUST00000157392 270 ntBASIC3.47□□□□□ -1.85
Ddb1Q3U1J4 Gm22814-201ENSMUST00000157452 104 ntBASIC3.47□□□□□ -1.85
Ddb1Q3U1J4 Gm18341-201ENSMUST00000197538 622 ntBASIC3.47□□□□□ -1.85
Ddb1Q3U1J4 Gm10298-201ENSMUST00000074801 265 ntBASIC3.47□□□□□ -1.85
Ddb1Q3U1J4 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Ddb1Q3U1J4 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Ddb1Q3U1J4 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Ddb1Q3U1J4 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Ddb1Q3U1J4 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Ddb1Q3U1J4 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Ddb1Q3U1J4 Gm26500-201ENSMUST00000101867 106 ntBASIC3.46□□□□□ -1.86
Ddb1Q3U1J4 Gm13378-201ENSMUST00000117483 336 ntBASIC3.46□□□□□ -1.86
Ddb1Q3U1J4 Gm12954-201ENSMUST00000118610 611 ntBASIC3.46□□□□□ -1.86
Ddb1Q3U1J4 Gm15211-201ENSMUST00000118932 528 ntBASIC3.46□□□□□ -1.86
Ddb1Q3U1J4 Defa-ps8-201ENSMUST00000120972 279 ntBASIC3.46□□□□□ -1.86
Ddb1Q3U1J4 Gm25362-201ENSMUST00000158854 105 ntBASIC3.46□□□□□ -1.86
Ddb1Q3U1J4 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Ddb1Q3U1J4 Gm27698-201ENSMUST00000184060 249 ntBASIC3.46□□□□□ -1.86
Ddb1Q3U1J4 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Ddb1Q3U1J4 Gm28825-201ENSMUST00000186233 238 ntBASIC3.46□□□□□ -1.86
Ddb1Q3U1J4 Gm30341-201ENSMUST00000194363 289 ntBASIC3.46□□□□□ -1.86
Ddb1Q3U1J4 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC3.46□□□□□ -1.86
Ddb1Q3U1J4 Mir7661-201ENSMUST00000197023 61 ntBASIC3.46□□□□□ -1.86
Ddb1Q3U1J4 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.46□□□□□ -1.86
Ddb1Q3U1J4 Gm10400-201ENSMUST00000203920 3835 ntBASIC3.46□□□□□ -1.86
Ddb1Q3U1J4 Gm44473-201ENSMUST00000204039 152 ntBASIC3.46□□□□□ -1.86
Ddb1Q3U1J4 Gm44010-201ENSMUST00000204432 331 ntBASIC3.46□□□□□ -1.86
Ddb1Q3U1J4 Gm46389-201ENSMUST00000223199 392 ntBASIC3.46□□□□□ -1.86
Ddb1Q3U1J4 Gm22685-201ENSMUST00000082848 106 ntBASIC3.46□□□□□ -1.86
Ddb1Q3U1J4 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC3.46□□□□□ -1.86
Ddb1Q3U1J4 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
Ddb1Q3U1J4 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Ddb1Q3U1J4 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
Ddb1Q3U1J4 Gm23951-201ENSMUST00000104029 132 ntBASIC3.45□□□□□ -1.86
Ddb1Q3U1J4 Gm24671-201ENSMUST00000104159 158 ntBASIC3.45□□□□□ -1.86
Ddb1Q3U1J4 Gm26341-201ENSMUST00000104561 134 ntBASIC3.45□□□□□ -1.86
Ddb1Q3U1J4 Gm15282-201ENSMUST00000117707 300 ntBASIC3.45□□□□□ -1.86
Ddb1Q3U1J4 Gm11794-201ENSMUST00000119446 237 ntBASIC3.45□□□□□ -1.86
Ddb1Q3U1J4 Gm11414-201ENSMUST00000121795 263 ntBASIC3.45□□□□□ -1.86
Ddb1Q3U1J4 Gm15213-201ENSMUST00000122098 216 ntBASIC3.45□□□□□ -1.86
Ddb1Q3U1J4 Gm24630-201ENSMUST00000122768 106 ntBASIC3.45□□□□□ -1.86
Ddb1Q3U1J4 Gm15733-201ENSMUST00000132957 242 ntBASIC3.45□□□□□ -1.86
Ddb1Q3U1J4 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Ddb1Q3U1J4 Snora15-201ENSMUST00000177461 131 ntBASIC3.45□□□□□ -1.86
Ddb1Q3U1J4 Gm27521-201ENSMUST00000184022 64 ntBASIC3.45□□□□□ -1.86
Ddb1Q3U1J4 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.45□□□□□ -1.86
Ddb1Q3U1J4 Gm43583-201ENSMUST00000199235 303 ntBASIC3.45□□□□□ -1.86
Ddb1Q3U1J4 Gm44524-201ENSMUST00000203899 271 ntBASIC3.45□□□□□ -1.86
Ddb1Q3U1J4 Gm45296-201ENSMUST00000209625 205 ntBASIC3.45□□□□□ -1.86
Ddb1Q3U1J4 CT010454.1-201ENSMUST00000225975 265 ntBASIC3.45□□□□□ -1.86
Ddb1Q3U1J4 AC151833.1-201ENSMUST00000227752 574 ntBASIC3.45□□□□□ -1.86
Ddb1Q3U1J4 Gm10088-201ENSMUST00000074116 423 ntBASIC3.45□□□□□ -1.86
Ddb1Q3U1J4 Gm23377-201ENSMUST00000082943 126 ntBASIC3.45□□□□□ -1.86
Ddb1Q3U1J4 Gm25401-201ENSMUST00000082975 106 ntBASIC3.45□□□□□ -1.86
Ddb1Q3U1J4 Gm22571-201ENSMUST00000082984 70 ntBASIC3.45□□□□□ -1.86
Ddb1Q3U1J4 AC117199.1-201ENSMUST00000219940 3132 ntBASIC3.45□□□□□ -1.86
Ddb1Q3U1J4 Gm43326-201ENSMUST00000198459 1638 ntBASIC3.44□□□□□ -1.86
Ddb1Q3U1J4 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Ddb1Q3U1J4 Gm12934-201ENSMUST00000119221 343 ntBASIC3.44□□□□□ -1.86
Ddb1Q3U1J4 Gm22961-201ENSMUST00000157964 106 ntBASIC3.44□□□□□ -1.86
Ddb1Q3U1J4 Gm22389-201ENSMUST00000158193 301 ntBASIC3.44□□□□□ -1.86
Ddb1Q3U1J4 Gm23545-201ENSMUST00000158205 104 ntBASIC3.44□□□□□ -1.86
Ddb1Q3U1J4 Mir6355-201ENSMUST00000183687 106 ntBASIC3.44□□□□□ -1.86
Ddb1Q3U1J4 Gm27369-201ENSMUST00000185182 71 ntBASIC3.44□□□□□ -1.86
Ddb1Q3U1J4 Gm36946-201ENSMUST00000192706 435 ntBASIC3.44□□□□□ -1.86
Ddb1Q3U1J4 Gm37807-201ENSMUST00000194310 190 ntBASIC3.44□□□□□ -1.86
Ddb1Q3U1J4 Gm44853-201ENSMUST00000209070 250 ntBASIC3.44□□□□□ -1.86
Ddb1Q3U1J4 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC3.44□□□□□ -1.86
Ddb1Q3U1J4 Gm40810-201ENSMUST00000219149 253 ntBASIC3.44□□□□□ -1.86
Ddb1Q3U1J4 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.44□□□□□ -1.86
Ddb1Q3U1J4 Gm23625-201ENSMUST00000082457 100 ntBASIC3.44□□□□□ -1.86
Ddb1Q3U1J4 Gm26458-201ENSMUST00000082832 128 ntBASIC3.44□□□□□ -1.86
Ddb1Q3U1J4 Gm26314-201ENSMUST00000083891 107 ntBASIC3.44□□□□□ -1.86
Ddb1Q3U1J4 CT009504.1-201ENSMUST00000218252 3330 ntBASIC3.44□□□□□ -1.86
Ddb1Q3U1J4 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Ddb1Q3U1J4 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Ddb1Q3U1J4 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Ddb1Q3U1J4 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
Ddb1Q3U1J4 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
Ddb1Q3U1J4 Gm24282-201ENSMUST00000104232 66 ntBASIC3.43□□□□□ -1.86
Ddb1Q3U1J4 Gm15536-201ENSMUST00000121411 114 ntBASIC3.43□□□□□ -1.86
Ddb1Q3U1J4 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC3.43□□□□□ -1.86
Ddb1Q3U1J4 Gm23559-201ENSMUST00000157824 103 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 281.4 ms