Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Ptchd3Q0EEE2 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC2.05□□□□□ -2.08
Ptchd3Q0EEE2 Gm44149-201ENSMUST00000204256 226 ntBASIC2.05□□□□□ -2.08
Ptchd3Q0EEE2 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.05□□□□□ -2.08
Ptchd3Q0EEE2 Gm40810-201ENSMUST00000219149 253 ntBASIC2.05□□□□□ -2.08
Ptchd3Q0EEE2 Gm23242-201ENSMUST00000083055 107 ntBASIC2.05□□□□□ -2.08
Ptchd3Q0EEE2 Gm25632-201ENSMUST00000083112 85 ntBASIC2.05□□□□□ -2.08
Ptchd3Q0EEE2 Gm12304-201ENSMUST00000120312 385 ntBASIC2.04□□□□□ -2.08
Ptchd3Q0EEE2 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC2.04□□□□□ -2.08
Ptchd3Q0EEE2 Gm25488-201ENSMUST00000158728 118 ntBASIC2.04□□□□□ -2.08
Ptchd3Q0EEE2 Gm22093-201ENSMUST00000158980 111 ntBASIC2.04□□□□□ -2.08
Ptchd3Q0EEE2 Gm24084-201ENSMUST00000175173 137 ntBASIC2.04□□□□□ -2.08
Ptchd3Q0EEE2 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Ptchd3Q0EEE2 Gm23660-201ENSMUST00000178362 79 ntBASIC2.04□□□□□ -2.08
Ptchd3Q0EEE2 Gm24088-201ENSMUST00000179100 79 ntBASIC2.04□□□□□ -2.08
Ptchd3Q0EEE2 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.04□□□□□ -2.08
Ptchd3Q0EEE2 Ighv2-8-201ENSMUST00000193935 262 ntBASIC2.04□□□□□ -2.08
Ptchd3Q0EEE2 Mir6925-201ENSMUST00000197857 70 ntBASIC2.04□□□□□ -2.08
Ptchd3Q0EEE2 Gm43472-201ENSMUST00000200175 154 ntBASIC2.04□□□□□ -2.08
Ptchd3Q0EEE2 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.04□□□□□ -2.08
Ptchd3Q0EEE2 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.04□□□□□ -2.08
Ptchd3Q0EEE2 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.04□□□□□ -2.08
Ptchd3Q0EEE2 Gm30155-201ENSMUST00000223458 339 ntBASIC2.04□□□□□ -2.08
Ptchd3Q0EEE2 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC2.04□□□□□ -2.08
Ptchd3Q0EEE2 Gm25801-201ENSMUST00000082638 106 ntBASIC2.04□□□□□ -2.08
Ptchd3Q0EEE2 Gm23453-201ENSMUST00000083326 106 ntBASIC2.04□□□□□ -2.08
Ptchd3Q0EEE2 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.04□□□□□ -2.08
Ptchd3Q0EEE2 Mir30d-201ENSMUST00000083503 82 ntBASIC2.04□□□□□ -2.08
Ptchd3Q0EEE2 Gm38388-201ENSMUST00000195569 1430 ntBASIC2.03□□□□□ -2.08
Ptchd3Q0EEE2 Gm25529-201ENSMUST00000104850 92 ntBASIC2.03□□□□□ -2.08
Ptchd3Q0EEE2 Gm13672-201ENSMUST00000117554 459 ntBASIC2.03□□□□□ -2.08
Ptchd3Q0EEE2 Gm12646-201ENSMUST00000119144 238 ntBASIC2.03□□□□□ -2.08
Ptchd3Q0EEE2 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Ptchd3Q0EEE2 Gm15692-201ENSMUST00000152173 352 ntBASIC2.03□□□□□ -2.08
Ptchd3Q0EEE2 Gm23381-201ENSMUST00000157676 94 ntBASIC2.03□□□□□ -2.08
Ptchd3Q0EEE2 Gm22308-201ENSMUST00000177609 107 ntBASIC2.03□□□□□ -2.08
Ptchd3Q0EEE2 Mir6355-201ENSMUST00000183687 106 ntBASIC2.03□□□□□ -2.08
Ptchd3Q0EEE2 Gm28090-201ENSMUST00000189458 664 ntBASIC2.03□□□□□ -2.08
Ptchd3Q0EEE2 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.03□□□□□ -2.08
Ptchd3Q0EEE2 Gm38050-201ENSMUST00000191904 238 ntBASIC2.03□□□□□ -2.08
Ptchd3Q0EEE2 Trbv18-201ENSMUST00000194256 294 ntBASIC2.03□□□□□ -2.08
Ptchd3Q0EEE2 Gm44083-201ENSMUST00000203114 337 ntBASIC2.03□□□□□ -2.08
Ptchd3Q0EEE2 Gm45119-201ENSMUST00000207612 199 ntBASIC2.03□□□□□ -2.08
Ptchd3Q0EEE2 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.03□□□□□ -2.08
Ptchd3Q0EEE2 AC109212.1-201ENSMUST00000215561 427 ntBASIC2.03□□□□□ -2.08
Ptchd3Q0EEE2 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.03□□□□□ -2.08
Ptchd3Q0EEE2 Gm22997-201ENSMUST00000082845 107 ntBASIC2.03□□□□□ -2.08
Ptchd3Q0EEE2 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Ptchd3Q0EEE2 Gm24282-201ENSMUST00000104232 66 ntBASIC2.02□□□□□ -2.09
Ptchd3Q0EEE2 Gm15010-201ENSMUST00000117153 407 ntBASIC2.02□□□□□ -2.09
Ptchd3Q0EEE2 Gm14215-201ENSMUST00000120578 221 ntBASIC2.02□□□□□ -2.09
Ptchd3Q0EEE2 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.02□□□□□ -2.09
Ptchd3Q0EEE2 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC2.02□□□□□ -2.09
Ptchd3Q0EEE2 Gm25863-201ENSMUST00000158249 329 ntBASIC2.02□□□□□ -2.09
Ptchd3Q0EEE2 Gm26159-201ENSMUST00000158968 104 ntBASIC2.02□□□□□ -2.09
Ptchd3Q0EEE2 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Ptchd3Q0EEE2 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC2.02□□□□□ -2.09
Ptchd3Q0EEE2 Gm18356-201ENSMUST00000185677 623 ntBASIC2.02□□□□□ -2.09
Ptchd3Q0EEE2 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.02□□□□□ -2.09
Ptchd3Q0EEE2 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC2.02□□□□□ -2.09
Ptchd3Q0EEE2 Gm45403-201ENSMUST00000209453 276 ntBASIC2.02□□□□□ -2.09
Ptchd3Q0EEE2 Gm45704-201ENSMUST00000212582 403 ntBASIC2.02□□□□□ -2.09
Ptchd3Q0EEE2 AC126267.1-201ENSMUST00000214282 284 ntBASIC2.02□□□□□ -2.09
Ptchd3Q0EEE2 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.02□□□□□ -2.09
Ptchd3Q0EEE2 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.02□□□□□ -2.09
Ptchd3Q0EEE2 AC109214.2-201ENSMUST00000220089 358 ntBASIC2.02□□□□□ -2.09
Ptchd3Q0EEE2 AC164117.2-201ENSMUST00000222090 327 ntBASIC2.02□□□□□ -2.09
Ptchd3Q0EEE2 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2.02□□□□□ -2.09
Ptchd3Q0EEE2 AC154747.1-201ENSMUST00000225265 239 ntBASIC2.02□□□□□ -2.09
Ptchd3Q0EEE2 Gm26265-201ENSMUST00000083277 135 ntBASIC2.02□□□□□ -2.09
Ptchd3Q0EEE2 Gm25896-201ENSMUST00000083713 136 ntBASIC2.02□□□□□ -2.09
Ptchd3Q0EEE2 Gm25651-201ENSMUST00000083782 119 ntBASIC2.02□□□□□ -2.09
Ptchd3Q0EEE2 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Ptchd3Q0EEE2 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Ptchd3Q0EEE2 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.01□□□□□ -2.09
Ptchd3Q0EEE2 Gm15215-201ENSMUST00000117773 489 ntBASIC2.01□□□□□ -2.09
Ptchd3Q0EEE2 Gm24053-201ENSMUST00000158620 105 ntBASIC2.01□□□□□ -2.09
Ptchd3Q0EEE2 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC2.01□□□□□ -2.09
Ptchd3Q0EEE2 Gm27399-201ENSMUST00000184250 78 ntBASIC2.01□□□□□ -2.09
Ptchd3Q0EEE2 Gm42570-201ENSMUST00000195937 292 ntBASIC2.01□□□□□ -2.09
Ptchd3Q0EEE2 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.01□□□□□ -2.09
Ptchd3Q0EEE2 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Ptchd3Q0EEE2 Gm33654-201ENSMUST00000221704 215 ntBASIC2.01□□□□□ -2.09
Ptchd3Q0EEE2 Gm21937-201ENSMUST00000222825 218 ntBASIC2.01□□□□□ -2.09
Ptchd3Q0EEE2 Gm23462-201ENSMUST00000083264 104 ntBASIC2.01□□□□□ -2.09
Ptchd3Q0EEE2 Mir301-201ENSMUST00000083655 86 ntBASIC2.01□□□□□ -2.09
Ptchd3Q0EEE2 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Ptchd3Q0EEE2 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.01□□□□□ -2.09
Ptchd3Q0EEE2 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Ptchd3Q0EEE2 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Ptchd3Q0EEE2 Gm42536-201ENSMUST00000197562 1613 ntBASIC2□□□□□ -2.09
Ptchd3Q0EEE2 Gm14775-201ENSMUST00000122089 310 ntBASIC2□□□□□ -2.09
Ptchd3Q0EEE2 Gm27926-201ENSMUST00000157180 66 ntBASIC2□□□□□ -2.09
Ptchd3Q0EEE2 Gm25625-201ENSMUST00000157221 96 ntBASIC2□□□□□ -2.09
Ptchd3Q0EEE2 Gm25460-201ENSMUST00000157954 127 ntBASIC2□□□□□ -2.09
Ptchd3Q0EEE2 Gm25658-201ENSMUST00000158472 128 ntBASIC2□□□□□ -2.09
Ptchd3Q0EEE2 Gm22435-201ENSMUST00000158552 128 ntBASIC2□□□□□ -2.09
Ptchd3Q0EEE2 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC2□□□□□ -2.09
Ptchd3Q0EEE2 Gm24388-201ENSMUST00000177872 107 ntBASIC2□□□□□ -2.09
Ptchd3Q0EEE2 Gm25457-201ENSMUST00000179509 107 ntBASIC2□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms