Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Col8a1Q00780 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Col8a1Q00780 Gm24276-201ENSMUST00000102181 110 ntBASIC3.05□□□□□ -1.92
Col8a1Q00780 Mir294-201ENSMUST00000104710 84 ntBASIC3.05□□□□□ -1.92
Col8a1Q00780 Gm9157-201ENSMUST00000117673 225 ntBASIC3.05□□□□□ -1.92
Col8a1Q00780 Gm25391-201ENSMUST00000157342 134 ntBASIC3.05□□□□□ -1.92
Col8a1Q00780 Gm23713-201ENSMUST00000157353 70 ntBASIC3.05□□□□□ -1.92
Col8a1Q00780 Gm22615-201ENSMUST00000158102 70 ntBASIC3.05□□□□□ -1.92
Col8a1Q00780 Gm23260-201ENSMUST00000158317 172 ntBASIC3.05□□□□□ -1.92
Col8a1Q00780 Gm26214-201ENSMUST00000158581 107 ntBASIC3.05□□□□□ -1.92
Col8a1Q00780 Gm29308-201ENSMUST00000188863 315 ntBASIC3.05□□□□□ -1.92
Col8a1Q00780 Gm28537-201ENSMUST00000189026 315 ntBASIC3.05□□□□□ -1.92
Col8a1Q00780 Gm29631-201ENSMUST00000191065 315 ntBASIC3.05□□□□□ -1.92
Col8a1Q00780 Gm38238-201ENSMUST00000194334 346 ntBASIC3.05□□□□□ -1.92
Col8a1Q00780 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC3.05□□□□□ -1.92
Col8a1Q00780 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.05□□□□□ -1.92
Col8a1Q00780 Gm24626-201ENSMUST00000082621 161 ntBASIC3.05□□□□□ -1.92
Col8a1Q00780 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Col8a1Q00780 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Col8a1Q00780 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.05□□□□□ -1.92
Col8a1Q00780 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Col8a1Q00780 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Col8a1Q00780 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm25089-201ENSMUST00000102015 79 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Col8a1Q00780 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm22148-201ENSMUST00000104445 107 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Mir1298-201ENSMUST00000116681 98 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm23492-201ENSMUST00000116837 115 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm14593-201ENSMUST00000119948 294 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm8244-201ENSMUST00000121254 264 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm6762-201ENSMUST00000121769 289 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm22225-201ENSMUST00000157358 278 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm23668-201ENSMUST00000157465 111 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm23753-201ENSMUST00000157575 149 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm22775-201ENSMUST00000177630 120 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm25840-201ENSMUST00000177821 79 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm24952-201ENSMUST00000177909 79 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm23682-201ENSMUST00000178146 79 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm24652-201ENSMUST00000178223 79 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm22629-201ENSMUST00000178272 79 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm24021-201ENSMUST00000178435 79 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm22274-201ENSMUST00000178441 79 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm22050-201ENSMUST00000178442 79 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm23688-201ENSMUST00000178502 79 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm23944-201ENSMUST00000178607 79 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm26283-201ENSMUST00000178625 79 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm25452-201ENSMUST00000178776 79 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm23286-201ENSMUST00000178963 79 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm22640-201ENSMUST00000179035 79 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm25984-201ENSMUST00000179129 79 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm25585-201ENSMUST00000179469 79 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm26374-201ENSMUST00000179737 79 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm24040-201ENSMUST00000179786 79 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm25017-201ENSMUST00000179805 79 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm23618-201ENSMUST00000179912 79 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm26284-201ENSMUST00000180107 79 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm23569-201ENSMUST00000180120 120 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm24570-201ENSMUST00000180314 79 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm24654-201ENSMUST00000180315 79 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm43563-201ENSMUST00000196761 198 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.04□□□□□ -1.92
Col8a1Q00780 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm45543-201ENSMUST00000209327 88 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 AC147545.1-201ENSMUST00000227528 108 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm25634-201ENSMUST00000082667 105 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Snora19-201ENSMUST00000082962 132 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm23658-201ENSMUST00000083233 132 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm23264-201ENSMUST00000083372 107 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm44434-201ENSMUST00000203918 3745 ntBASIC3.04□□□□□ -1.92
Col8a1Q00780 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Col8a1Q00780 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Col8a1Q00780 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
Col8a1Q00780 AC117226.1-201ENSMUST00000221635 3737 ntBASIC3.03□□□□□ -1.92
Col8a1Q00780 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Col8a1Q00780 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
Col8a1Q00780 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.03□□□□□ -1.92
Col8a1Q00780 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Col8a1Q00780 Gm22779-201ENSMUST00000104085 107 ntBASIC3.03□□□□□ -1.92
Col8a1Q00780 Gm22373-201ENSMUST00000104584 89 ntBASIC3.03□□□□□ -1.92
Col8a1Q00780 Mir1195-201ENSMUST00000116818 98 ntBASIC3.03□□□□□ -1.92
Col8a1Q00780 Gm13922-201ENSMUST00000119505 156 ntBASIC3.03□□□□□ -1.92
Col8a1Q00780 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.03□□□□□ -1.92
Col8a1Q00780 Gm25961-201ENSMUST00000157174 135 ntBASIC3.03□□□□□ -1.92
Col8a1Q00780 Gm22316-201ENSMUST00000158012 216 ntBASIC3.03□□□□□ -1.92
Col8a1Q00780 Gm24053-201ENSMUST00000158620 105 ntBASIC3.03□□□□□ -1.92
Col8a1Q00780 Gm44223-201ENSMUST00000204854 114 ntBASIC3.03□□□□□ -1.92
Col8a1Q00780 AC132615.1-201ENSMUST00000213873 255 ntBASIC3.03□□□□□ -1.92
Col8a1Q00780 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.03□□□□□ -1.92
Col8a1Q00780 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.03□□□□□ -1.92
Col8a1Q00780 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
Col8a1Q00780 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.03□□□□□ -1.92
Col8a1Q00780 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.03□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms