Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Sf3b6P59708 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Sf3b6P59708 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.15□□□□□ -1.91
Sf3b6P59708 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC3.15□□□□□ -1.91
Sf3b6P59708 Gm33866-201ENSMUST00000196911 289 ntBASIC3.15□□□□□ -1.91
Sf3b6P59708 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.15□□□□□ -1.91
Sf3b6P59708 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.15□□□□□ -1.91
Sf3b6P59708 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.15□□□□□ -1.91
Sf3b6P59708 AC153646.2-201ENSMUST00000220516 109 ntBASIC3.15□□□□□ -1.91
Sf3b6P59708 Gm25634-201ENSMUST00000082667 105 ntBASIC3.15□□□□□ -1.91
Sf3b6P59708 Gm22421-201ENSMUST00000083058 107 ntBASIC3.15□□□□□ -1.91
Sf3b6P59708 Mir124a-3-201ENSMUST00000083520 68 ntBASIC3.15□□□□□ -1.91
Sf3b6P59708 Snord15a-201ENSMUST00000083888 148 ntBASIC3.15□□□□□ -1.91
Sf3b6P59708 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Sf3b6P59708 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.15□□□□□ -1.91
Sf3b6P59708 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Sf3b6P59708 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sf3b6P59708 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Sf3b6P59708 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
Sf3b6P59708 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sf3b6P59708 Gm25169-201ENSMUST00000104190 129 ntBASIC3.14□□□□□ -1.91
Sf3b6P59708 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Sf3b6P59708 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC3.14□□□□□ -1.91
Sf3b6P59708 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC3.14□□□□□ -1.91
Sf3b6P59708 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC3.14□□□□□ -1.91
Sf3b6P59708 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC3.14□□□□□ -1.91
Sf3b6P59708 Gm26276-201ENSMUST00000157099 109 ntBASIC3.14□□□□□ -1.91
Sf3b6P59708 Gm24745-201ENSMUST00000157840 85 ntBASIC3.14□□□□□ -1.91
Sf3b6P59708 Gm23642-201ENSMUST00000157858 258 ntBASIC3.14□□□□□ -1.91
Sf3b6P59708 Gm20399-201ENSMUST00000174652 132 ntBASIC3.14□□□□□ -1.91
Sf3b6P59708 Gm27582-201ENSMUST00000184084 126 ntBASIC3.14□□□□□ -1.91
Sf3b6P59708 Gm28344-201ENSMUST00000185704 279 ntBASIC3.14□□□□□ -1.91
Sf3b6P59708 Gm17966-201ENSMUST00000193453 594 ntBASIC3.14□□□□□ -1.91
Sf3b6P59708 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.14□□□□□ -1.91
Sf3b6P59708 Gm45013-201ENSMUST00000206883 178 ntBASIC3.14□□□□□ -1.91
Sf3b6P59708 AC154994.1-201ENSMUST00000217395 302 ntBASIC3.14□□□□□ -1.91
Sf3b6P59708 AC122194.1-201ENSMUST00000220549 293 ntBASIC3.14□□□□□ -1.91
Sf3b6P59708 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.14□□□□□ -1.91
Sf3b6P59708 Gm11351-202ENSMUST00000225724 478 ntBASIC3.14□□□□□ -1.91
Sf3b6P59708 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sf3b6P59708 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC3.14□□□□□ -1.91
Sf3b6P59708 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.14□□□□□ -1.91
Sf3b6P59708 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sf3b6P59708 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.14□□□□□ -1.91
Sf3b6P59708 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sf3b6P59708 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sf3b6P59708 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Sf3b6P59708 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Sf3b6P59708 Gm2869-201ENSMUST00000124359 2621 ntBASIC3.13□□□□□ -1.91
Sf3b6P59708 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.13□□□□□ -1.91
Sf3b6P59708 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Sf3b6P59708 Gm11982-201ENSMUST00000121480 314 ntBASIC3.13□□□□□ -1.91
Sf3b6P59708 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.13□□□□□ -1.91
Sf3b6P59708 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Sf3b6P59708 Gm23816-201ENSMUST00000179617 132 ntBASIC3.13□□□□□ -1.91
Sf3b6P59708 Gm23966-201ENSMUST00000179823 107 ntBASIC3.13□□□□□ -1.91
Sf3b6P59708 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.13□□□□□ -1.91
Sf3b6P59708 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.13□□□□□ -1.91
Sf3b6P59708 Gm29408-201ENSMUST00000187536 216 ntBASIC3.13□□□□□ -1.91
Sf3b6P59708 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC3.13□□□□□ -1.91
Sf3b6P59708 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.13□□□□□ -1.91
Sf3b6P59708 Gm43239-201ENSMUST00000200131 201 ntBASIC3.13□□□□□ -1.91
Sf3b6P59708 Gm45116-201ENSMUST00000207392 275 ntBASIC3.13□□□□□ -1.91
Sf3b6P59708 AC158597.1-201ENSMUST00000216234 150 ntBASIC3.13□□□□□ -1.91
Sf3b6P59708 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Sf3b6P59708 Gm22248-201ENSMUST00000082482 150 ntBASIC3.13□□□□□ -1.91
Sf3b6P59708 n-R5s85-201ENSMUST00000083453 113 ntBASIC3.13□□□□□ -1.91
Sf3b6P59708 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Sf3b6P59708 AC153964.2-201ENSMUST00000217704 2474 ntBASIC3.12□□□□□ -1.91
Sf3b6P59708 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Sf3b6P59708 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Sf3b6P59708 Gm25765-201ENSMUST00000104100 132 ntBASIC3.12□□□□□ -1.91
Sf3b6P59708 Gm13314-201ENSMUST00000118742 335 ntBASIC3.12□□□□□ -1.91
Sf3b6P59708 Gm12143-201ENSMUST00000119666 332 ntBASIC3.12□□□□□ -1.91
Sf3b6P59708 Gm22986-201ENSMUST00000122753 130 ntBASIC3.12□□□□□ -1.91
Sf3b6P59708 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.12□□□□□ -1.91
Sf3b6P59708 Gm22281-201ENSMUST00000157198 103 ntBASIC3.12□□□□□ -1.91
Sf3b6P59708 Gm22606-201ENSMUST00000158290 103 ntBASIC3.12□□□□□ -1.91
Sf3b6P59708 Gm22853-201ENSMUST00000174974 131 ntBASIC3.12□□□□□ -1.91
Sf3b6P59708 Mir6907-201ENSMUST00000183764 71 ntBASIC3.12□□□□□ -1.91
Sf3b6P59708 Gm27648-201ENSMUST00000184315 107 ntBASIC3.12□□□□□ -1.91
Sf3b6P59708 Gm37343-201ENSMUST00000192542 111 ntBASIC3.12□□□□□ -1.91
Sf3b6P59708 Gm44476-201ENSMUST00000196225 91 ntBASIC3.12□□□□□ -1.91
Sf3b6P59708 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.12□□□□□ -1.91
Sf3b6P59708 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Sf3b6P59708 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Sf3b6P59708 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Sf3b6P59708 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Sf3b6P59708 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.12□□□□□ -1.91
Sf3b6P59708 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Sf3b6P59708 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
Sf3b6P59708 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Sf3b6P59708 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Sf3b6P59708 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.11□□□□□ -1.91
Sf3b6P59708 Gm22270-201ENSMUST00000104034 132 ntBASIC3.11□□□□□ -1.91
Sf3b6P59708 Gm24126-201ENSMUST00000104111 106 ntBASIC3.11□□□□□ -1.91
Sf3b6P59708 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.11□□□□□ -1.91
Sf3b6P59708 Gm23540-201ENSMUST00000157543 164 ntBASIC3.11□□□□□ -1.91
Sf3b6P59708 Gm22381-201ENSMUST00000158186 107 ntBASIC3.11□□□□□ -1.91
Sf3b6P59708 Gm22075-201ENSMUST00000158599 192 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms