Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm24793-201ENSMUST00000104289 132 ntBASIC0.74□□□□□ -2.29
Cux1P53564 Gm15861-201ENSMUST00000120979 339 ntBASIC0.74□□□□□ -2.29
Cux1P53564 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Cux1P53564 Gm18357-201ENSMUST00000188184 580 ntBASIC0.74□□□□□ -2.29
Cux1P53564 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Cux1P53564 Gm37578-201ENSMUST00000192256 1177 ntBASIC0.74□□□□□ -2.29
Cux1P53564 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC0.74□□□□□ -2.29
Cux1P53564 Gm3333-202ENSMUST00000221763 1044 ntBASIC0.74□□□□□ -2.29
Cux1P53564 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC0.74□□□□□ -2.29
Cux1P53564 Gm45872-201ENSMUST00000209804 1584 ntBASIC0.74□□□□□ -2.29
Cux1P53564 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
Cux1P53564 Gm12053-201ENSMUST00000119022 252 ntBASIC0.74□□□□□ -2.29
Cux1P53564 Gm14979-201ENSMUST00000121561 1035 ntBASIC0.74□□□□□ -2.29
Cux1P53564 Gm25933-201ENSMUST00000178943 108 ntBASIC0.74□□□□□ -2.29
Cux1P53564 Gm24020-201ENSMUST00000180156 108 ntBASIC0.74□□□□□ -2.29
Cux1P53564 Gm27342-201ENSMUST00000183530 109 ntBASIC0.74□□□□□ -2.29
Cux1P53564 Gm18296-201ENSMUST00000192475 783 ntBASIC0.74□□□□□ -2.29
Cux1P53564 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC0.74□□□□□ -2.29
Cux1P53564 AC102352.1-201ENSMUST00000224187 582 ntBASIC0.74□□□□□ -2.29
Cux1P53564 n-R5s37-201ENSMUST00000082533 118 ntBASIC0.74□□□□□ -2.29
Cux1P53564 Gm24079-201ENSMUST00000104352 132 ntBASIC0.73□□□□□ -2.29
Cux1P53564 Gm30738-201ENSMUST00000221346 502 ntBASIC0.73□□□□□ -2.29
Cux1P53564 Mir1942-201ENSMUST00000157274 63 ntBASIC0.72□□□□□ -2.29
Cux1P53564 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC0.72□□□□□ -2.29
Cux1P53564 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
Cux1P53564 Gm25457-201ENSMUST00000179509 107 ntBASIC0.72□□□□□ -2.29
Cux1P53564 Gm34139-201ENSMUST00000196166 294 ntBASIC0.72□□□□□ -2.29
Cux1P53564 Gm43531-201ENSMUST00000200676 1114 ntBASIC0.72□□□□□ -2.29
Cux1P53564 Gm18252-203ENSMUST00000215855 757 ntBASIC0.72□□□□□ -2.29
Cux1P53564 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC0.72□□□□□ -2.29
Cux1P53564 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
Cux1P53564 Gm22974-201ENSMUST00000083301 103 ntBASIC0.72□□□□□ -2.29
Cux1P53564 Gm38388-201ENSMUST00000195569 1430 ntBASIC0.72□□□□□ -2.29
Cux1P53564 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
Cux1P53564 Gm24851-201ENSMUST00000158028 103 ntBASIC0.71□□□□□ -2.3
Cux1P53564 Gm26038-201ENSMUST00000158151 106 ntBASIC0.71□□□□□ -2.3
Cux1P53564 Gm3027-201ENSMUST00000167579 451 ntBASIC0.71□□□□□ -2.3
Cux1P53564 Gm22418-201ENSMUST00000180326 107 ntBASIC0.71□□□□□ -2.3
Cux1P53564 Mir7675-201ENSMUST00000184262 58 ntBASIC0.71□□□□□ -2.3
Cux1P53564 Mir6388-201ENSMUST00000184417 75 ntBASIC0.71□□□□□ -2.3
Cux1P53564 Gm27964-201ENSMUST00000185195 62 ntBASIC0.71□□□□□ -2.3
Cux1P53564 Gm45439-201ENSMUST00000211723 359 ntBASIC0.71□□□□□ -2.3
Cux1P53564 Gm46103-201ENSMUST00000217614 341 ntBASIC0.71□□□□□ -2.3
Cux1P53564 Gm18774-201ENSMUST00000218269 601 ntBASIC0.71□□□□□ -2.3
Cux1P53564 AC167977.2-201ENSMUST00000225676 682 ntBASIC0.71□□□□□ -2.3
Cux1P53564 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
Cux1P53564 Gm14445-201ENSMUST00000117051 1484 ntBASIC0.71□□□□□ -2.3
Cux1P53564 Gm11891-201ENSMUST00000121241 619 ntBASIC0.7□□□□□ -2.3
Cux1P53564 Gm15167-201ENSMUST00000121997 187 ntBASIC0.7□□□□□ -2.3
Cux1P53564 Gm15214-201ENSMUST00000122155 470 ntBASIC0.7□□□□□ -2.3
Cux1P53564 Gm24598-201ENSMUST00000122510 74 ntBASIC0.7□□□□□ -2.3
Cux1P53564 Gm24839-201ENSMUST00000122602 107 ntBASIC0.7□□□□□ -2.3
Cux1P53564 Gm24385-201ENSMUST00000122694 350 ntBASIC0.7□□□□□ -2.3
Cux1P53564 Gm23956-201ENSMUST00000157211 119 ntBASIC0.7□□□□□ -2.3
Cux1P53564 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC0.7□□□□□ -2.3
Cux1P53564 Gm43432-201ENSMUST00000196352 121 ntBASIC0.7□□□□□ -2.3
Cux1P53564 AC158597.1-201ENSMUST00000216234 150 ntBASIC0.7□□□□□ -2.3
Cux1P53564 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC0.7□□□□□ -2.3
Cux1P53564 Gm23924-201ENSMUST00000082474 108 ntBASIC0.7□□□□□ -2.3
Cux1P53564 Gm23645-201ENSMUST00000083228 108 ntBASIC0.7□□□□□ -2.3
Cux1P53564 Gm25128-201ENSMUST00000083339 76 ntBASIC0.7□□□□□ -2.3
Cux1P53564 Snord35a-201ENSMUST00000083884 90 ntBASIC0.7□□□□□ -2.3
Cux1P53564 Gm13992-201ENSMUST00000120558 156 ntBASIC0.69□□□□□ -2.3
Cux1P53564 Gm9236-201ENSMUST00000196892 587 ntBASIC0.69□□□□□ -2.3
Cux1P53564 Gm44482-201ENSMUST00000199232 103 ntBASIC0.69□□□□□ -2.3
Cux1P53564 Gm44465-201ENSMUST00000199536 114 ntBASIC0.69□□□□□ -2.3
Cux1P53564 Gm45907-201ENSMUST00000213023 193 ntBASIC0.69□□□□□ -2.3
Cux1P53564 AC112935.1-201ENSMUST00000227603 250 ntBASIC0.69□□□□□ -2.3
Cux1P53564 Gm24622-201ENSMUST00000082619 162 ntBASIC0.69□□□□□ -2.3
Cux1P53564 Gm43924-201ENSMUST00000204851 1736 ntBASIC0.69□□□□□ -2.3
Cux1P53564 Gm26074-201ENSMUST00000104063 129 ntBASIC0.69□□□□□ -2.3
Cux1P53564 Gm22544-201ENSMUST00000104349 127 ntBASIC0.69□□□□□ -2.3
Cux1P53564 Gm12370-201ENSMUST00000117809 604 ntBASIC0.69□□□□□ -2.3
Cux1P53564 Gm12889-201ENSMUST00000118684 241 ntBASIC0.69□□□□□ -2.3
Cux1P53564 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
Cux1P53564 Gm28912-201ENSMUST00000189001 234 ntBASIC0.69□□□□□ -2.3
Cux1P53564 Gm19709-201ENSMUST00000215403 482 ntBASIC0.69□□□□□ -2.3
Cux1P53564 AC140477.1-201ENSMUST00000222354 246 ntBASIC0.69□□□□□ -2.3
Cux1P53564 AC154521.1-201ENSMUST00000222635 330 ntBASIC0.69□□□□□ -2.3
Cux1P53564 AC126691.1-201ENSMUST00000226534 202 ntBASIC0.69□□□□□ -2.3
Cux1P53564 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
Cux1P53564 Gm23733-201ENSMUST00000083750 106 ntBASIC0.69□□□□□ -2.3
Cux1P53564 Gm23042-201ENSMUST00000083866 101 ntBASIC0.69□□□□□ -2.3
Cux1P53564 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
Cux1P53564 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
Cux1P53564 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC0.68□□□□□ -2.3
Cux1P53564 Gm15279-201ENSMUST00000155593 288 ntBASIC0.68□□□□□ -2.3
Cux1P53564 Gm24997-201ENSMUST00000157910 105 ntBASIC0.68□□□□□ -2.3
Cux1P53564 Mir6335-201ENSMUST00000184081 98 ntBASIC0.68□□□□□ -2.3
Cux1P53564 Gm28995-201ENSMUST00000186625 261 ntBASIC0.68□□□□□ -2.3
Cux1P53564 Gm38323-201ENSMUST00000192450 210 ntBASIC0.68□□□□□ -2.3
Cux1P53564 Ighv2-8-201ENSMUST00000193935 262 ntBASIC0.68□□□□□ -2.3
Cux1P53564 Gm43894-201ENSMUST00000203274 688 ntBASIC0.68□□□□□ -2.3
Cux1P53564 Gm44961-201ENSMUST00000207450 196 ntBASIC0.68□□□□□ -2.3
Cux1P53564 Snord96a-201ENSMUST00000082791 81 ntBASIC0.68□□□□□ -2.3
Cux1P53564 Gm23969-201ENSMUST00000083324 74 ntBASIC0.68□□□□□ -2.3
Cux1P53564 Mir421-201ENSMUST00000083575 76 ntBASIC0.68□□□□□ -2.3
Cux1P53564 Gm23102-201ENSMUST00000083724 116 ntBASIC0.68□□□□□ -2.3
Cux1P53564 Gm25213-201ENSMUST00000102388 113 ntBASIC0.67□□□□□ -2.3
Cux1P53564 Mir544-201ENSMUST00000103813 78 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms