Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm45907-201ENSMUST00000213023 193 ntBASIC3.22□□□□□ -1.89
Shmt1P50431 AC171206.2-201ENSMUST00000215252 389 ntBASIC3.22□□□□□ -1.89
Shmt1P50431 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.22□□□□□ -1.89
Shmt1P50431 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Shmt1P50431 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.22□□□□□ -1.89
Shmt1P50431 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
Shmt1P50431 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
Shmt1P50431 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Shmt1P50431 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Shmt1P50431 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Shmt1P50431 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Shmt1P50431 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Shmt1P50431 Snord19-201ENSMUST00000104609 76 ntBASIC3.21□□□□□ -1.9
Shmt1P50431 Mir872-201ENSMUST00000104728 81 ntBASIC3.21□□□□□ -1.9
Shmt1P50431 Gm13432-201ENSMUST00000118861 241 ntBASIC3.21□□□□□ -1.9
Shmt1P50431 Gm22957-201ENSMUST00000122511 123 ntBASIC3.21□□□□□ -1.9
Shmt1P50431 Gm24787-201ENSMUST00000157380 123 ntBASIC3.21□□□□□ -1.9
Shmt1P50431 Gm24959-201ENSMUST00000157924 146 ntBASIC3.21□□□□□ -1.9
Shmt1P50431 Gm23380-201ENSMUST00000158448 103 ntBASIC3.21□□□□□ -1.9
Shmt1P50431 Gm27465-201ENSMUST00000184290 91 ntBASIC3.21□□□□□ -1.9
Shmt1P50431 Gm32175-201ENSMUST00000193641 346 ntBASIC3.21□□□□□ -1.9
Shmt1P50431 AC154636.2-201ENSMUST00000222538 161 ntBASIC3.21□□□□□ -1.9
Shmt1P50431 AC166830.2-201ENSMUST00000225821 196 ntBASIC3.21□□□□□ -1.9
Shmt1P50431 Gm26204-201ENSMUST00000082906 107 ntBASIC3.21□□□□□ -1.9
Shmt1P50431 Snord14d-201ENSMUST00000083424 86 ntBASIC3.21□□□□□ -1.9
Shmt1P50431 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
Shmt1P50431 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.21□□□□□ -1.9
Shmt1P50431 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Shmt1P50431 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Shmt1P50431 Gm25421-201ENSMUST00000104218 164 ntBASIC3.2□□□□□ -1.9
Shmt1P50431 Mdga2-203ENSMUST00000113942 423 ntBASIC3.2□□□□□ -1.9
Shmt1P50431 Gm15714-201ENSMUST00000117168 250 ntBASIC3.2□□□□□ -1.9
Shmt1P50431 Gm12723-201ENSMUST00000120700 451 ntBASIC3.2□□□□□ -1.9
Shmt1P50431 Gm14922-201ENSMUST00000121131 163 ntBASIC3.2□□□□□ -1.9
Shmt1P50431 Gm25805-201ENSMUST00000122788 108 ntBASIC3.2□□□□□ -1.9
Shmt1P50431 Gm22225-201ENSMUST00000157358 278 ntBASIC3.2□□□□□ -1.9
Shmt1P50431 Gm25863-201ENSMUST00000158249 329 ntBASIC3.2□□□□□ -1.9
Shmt1P50431 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Shmt1P50431 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Shmt1P50431 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC3.2□□□□□ -1.9
Shmt1P50431 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Shmt1P50431 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC3.2□□□□□ -1.9
Shmt1P50431 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC3.2□□□□□ -1.9
Shmt1P50431 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
Shmt1P50431 AC124537.1-201ENSMUST00000222890 159 ntBASIC3.2□□□□□ -1.9
Shmt1P50431 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Shmt1P50431 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Shmt1P50431 Gm22249-201ENSMUST00000082485 136 ntBASIC3.2□□□□□ -1.9
Shmt1P50431 Gm25930-201ENSMUST00000082785 107 ntBASIC3.2□□□□□ -1.9
Shmt1P50431 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.2□□□□□ -1.9
Shmt1P50431 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.19□□□□□ -1.9
Shmt1P50431 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Shmt1P50431 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.19□□□□□ -1.9
Shmt1P50431 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Shmt1P50431 Gm23472-201ENSMUST00000101806 191 ntBASIC3.19□□□□□ -1.9
Shmt1P50431 Gm25538-201ENSMUST00000101943 107 ntBASIC3.19□□□□□ -1.9
Shmt1P50431 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.19□□□□□ -1.9
Shmt1P50431 Gm26026-201ENSMUST00000122726 123 ntBASIC3.19□□□□□ -1.9
Shmt1P50431 Gm15733-201ENSMUST00000132957 242 ntBASIC3.19□□□□□ -1.9
Shmt1P50431 Gm25051-201ENSMUST00000158602 249 ntBASIC3.19□□□□□ -1.9
Shmt1P50431 Mir3106-201ENSMUST00000175401 82 ntBASIC3.19□□□□□ -1.9
Shmt1P50431 Gm24497-201ENSMUST00000177868 191 ntBASIC3.19□□□□□ -1.9
Shmt1P50431 Gm6660-201ENSMUST00000179149 468 ntBASIC3.19□□□□□ -1.9
Shmt1P50431 Gm37624-201ENSMUST00000193751 219 ntBASIC3.19□□□□□ -1.9
Shmt1P50431 Gm23370-202ENSMUST00000197008 129 ntBASIC3.19□□□□□ -1.9
Shmt1P50431 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.19□□□□□ -1.9
Shmt1P50431 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.19□□□□□ -1.9
Shmt1P50431 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC3.19□□□□□ -1.9
Shmt1P50431 AC123860.1-201ENSMUST00000228033 481 ntBASIC3.19□□□□□ -1.9
Shmt1P50431 Gm23444-201ENSMUST00000082922 191 ntBASIC3.19□□□□□ -1.9
Shmt1P50431 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Shmt1P50431 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC3.19□□□□□ -1.9
Shmt1P50431 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
Shmt1P50431 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Shmt1P50431 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Shmt1P50431 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Shmt1P50431 Gm4746-201ENSMUST00000120395 2406 ntBASIC3.18□□□□□ -1.9
Shmt1P50431 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Shmt1P50431 Gm13355-201ENSMUST00000117996 317 ntBASIC3.18□□□□□ -1.9
Shmt1P50431 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC3.18□□□□□ -1.9
Shmt1P50431 Gm25373-201ENSMUST00000158156 115 ntBASIC3.18□□□□□ -1.9
Shmt1P50431 Gm25615-201ENSMUST00000177836 94 ntBASIC3.18□□□□□ -1.9
Shmt1P50431 Gm26200-201ENSMUST00000180273 79 ntBASIC3.18□□□□□ -1.9
Shmt1P50431 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC3.18□□□□□ -1.9
Shmt1P50431 Gm28650-201ENSMUST00000188413 411 ntBASIC3.18□□□□□ -1.9
Shmt1P50431 Gm24350-202ENSMUST00000198309 132 ntBASIC3.18□□□□□ -1.9
Shmt1P50431 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.18□□□□□ -1.9
Shmt1P50431 AC188459.1-201ENSMUST00000216651 300 ntBASIC3.18□□□□□ -1.9
Shmt1P50431 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.18□□□□□ -1.9
Shmt1P50431 Gm22704-201ENSMUST00000083027 137 ntBASIC3.18□□□□□ -1.9
Shmt1P50431 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
Shmt1P50431 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.18□□□□□ -1.9
Shmt1P50431 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Shmt1P50431 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Shmt1P50431 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Shmt1P50431 Mir291a-201ENSMUST00000104815 82 ntBASIC3.17□□□□□ -1.9
Shmt1P50431 Gm25543-201ENSMUST00000122678 312 ntBASIC3.17□□□□□ -1.9
Shmt1P50431 Gm25115-201ENSMUST00000157187 140 ntBASIC3.17□□□□□ -1.9
Shmt1P50431 Gm22215-201ENSMUST00000157558 96 ntBASIC3.17□□□□□ -1.9
Shmt1P50431 Gm22537-201ENSMUST00000158172 199 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 118 ms