Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm22337-201ENSMUST00000157721 132 ntBASIC3.97□□□□□ -1.77
Rfx1P48377 Gm24998-201ENSMUST00000157908 89 ntBASIC3.97□□□□□ -1.77
Rfx1P48377 Gm24053-201ENSMUST00000158620 105 ntBASIC3.97□□□□□ -1.77
Rfx1P48377 Gm26005-201ENSMUST00000158802 134 ntBASIC3.97□□□□□ -1.77
Rfx1P48377 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Rfx1P48377 Gm38311-201ENSMUST00000192945 165 ntBASIC3.97□□□□□ -1.77
Rfx1P48377 Gm42526-201ENSMUST00000198956 393 ntBASIC3.97□□□□□ -1.77
Rfx1P48377 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC3.97□□□□□ -1.77
Rfx1P48377 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Rfx1P48377 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.97□□□□□ -1.77
Rfx1P48377 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
Rfx1P48377 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Rfx1P48377 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.96□□□□□ -1.78
Rfx1P48377 Gm14652-201ENSMUST00000118479 235 ntBASIC3.96□□□□□ -1.78
Rfx1P48377 Gm23571-201ENSMUST00000180073 127 ntBASIC3.96□□□□□ -1.78
Rfx1P48377 Gm44459-201ENSMUST00000203926 160 ntBASIC3.96□□□□□ -1.78
Rfx1P48377 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.96□□□□□ -1.78
Rfx1P48377 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.96□□□□□ -1.78
Rfx1P48377 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.96□□□□□ -1.78
Rfx1P48377 Gm26265-201ENSMUST00000083277 135 ntBASIC3.96□□□□□ -1.78
Rfx1P48377 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Rfx1P48377 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Rfx1P48377 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
Rfx1P48377 AC157570.1-201ENSMUST00000218052 3778 ntBASIC3.95□□□□□ -1.78
Rfx1P48377 Gm6071-201ENSMUST00000119561 440 ntBASIC3.95□□□□□ -1.78
Rfx1P48377 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC3.95□□□□□ -1.78
Rfx1P48377 Gm27585-201ENSMUST00000183717 199 ntBASIC3.95□□□□□ -1.78
Rfx1P48377 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.95□□□□□ -1.78
Rfx1P48377 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC3.95□□□□□ -1.78
Rfx1P48377 AC154636.2-201ENSMUST00000222538 161 ntBASIC3.95□□□□□ -1.78
Rfx1P48377 AC122320.1-201ENSMUST00000227233 105 ntBASIC3.95□□□□□ -1.78
Rfx1P48377 Gm24625-201ENSMUST00000082622 130 ntBASIC3.95□□□□□ -1.78
Rfx1P48377 Gm10360-201ENSMUST00000097219 272 ntBASIC3.95□□□□□ -1.78
Rfx1P48377 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Rfx1P48377 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Rfx1P48377 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Rfx1P48377 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
Rfx1P48377 Gm24982-201ENSMUST00000104456 132 ntBASIC3.94□□□□□ -1.78
Rfx1P48377 Gm6762-201ENSMUST00000121769 289 ntBASIC3.94□□□□□ -1.78
Rfx1P48377 Gm16533-201ENSMUST00000140035 228 ntBASIC3.94□□□□□ -1.78
Rfx1P48377 Gm22767-201ENSMUST00000158365 165 ntBASIC3.94□□□□□ -1.78
Rfx1P48377 Gm17528-201ENSMUST00000171026 239 ntBASIC3.94□□□□□ -1.78
Rfx1P48377 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Rfx1P48377 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Rfx1P48377 Gm32175-201ENSMUST00000193641 346 ntBASIC3.94□□□□□ -1.78
Rfx1P48377 Gm37097-201ENSMUST00000193676 336 ntBASIC3.94□□□□□ -1.78
Rfx1P48377 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Rfx1P48377 Gm4945-201ENSMUST00000075152 453 ntBASIC3.94□□□□□ -1.78
Rfx1P48377 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.94□□□□□ -1.78
Rfx1P48377 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC3.94□□□□□ -1.78
Rfx1P48377 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Rfx1P48377 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
Rfx1P48377 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Rfx1P48377 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Rfx1P48377 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.93□□□□□ -1.78
Rfx1P48377 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Rfx1P48377 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Rfx1P48377 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Rfx1P48377 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC3.93□□□□□ -1.78
Rfx1P48377 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC3.93□□□□□ -1.78
Rfx1P48377 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.93□□□□□ -1.78
Rfx1P48377 Gm23584-201ENSMUST00000157655 129 ntBASIC3.93□□□□□ -1.78
Rfx1P48377 Gm22989-201ENSMUST00000158313 86 ntBASIC3.93□□□□□ -1.78
Rfx1P48377 Gm10357-201ENSMUST00000159886 264 ntBASIC3.93□□□□□ -1.78
Rfx1P48377 Gm22910-201ENSMUST00000178568 132 ntBASIC3.93□□□□□ -1.78
Rfx1P48377 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Rfx1P48377 Gm28002-201ENSMUST00000184832 100 ntBASIC3.93□□□□□ -1.78
Rfx1P48377 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.93□□□□□ -1.78
Rfx1P48377 Gm43993-201ENSMUST00000203972 247 ntBASIC3.93□□□□□ -1.78
Rfx1P48377 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Rfx1P48377 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.93□□□□□ -1.78
Rfx1P48377 AC158982.2-201ENSMUST00000226283 184 ntBASIC3.93□□□□□ -1.78
Rfx1P48377 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
Rfx1P48377 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Rfx1P48377 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.93□□□□□ -1.78
Rfx1P48377 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Rfx1P48377 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Rfx1P48377 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Rfx1P48377 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Rfx1P48377 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Rfx1P48377 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.92□□□□□ -1.78
Rfx1P48377 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Rfx1P48377 Gm12025-201ENSMUST00000117768 144 ntBASIC3.92□□□□□ -1.78
Rfx1P48377 Gm12143-201ENSMUST00000119666 332 ntBASIC3.92□□□□□ -1.78
Rfx1P48377 Gm12335-201ENSMUST00000119738 327 ntBASIC3.92□□□□□ -1.78
Rfx1P48377 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.92□□□□□ -1.78
Rfx1P48377 Gm25059-201ENSMUST00000157367 117 ntBASIC3.92□□□□□ -1.78
Rfx1P48377 Gm22853-201ENSMUST00000174974 131 ntBASIC3.92□□□□□ -1.78
Rfx1P48377 Gm22800-201ENSMUST00000175627 94 ntBASIC3.92□□□□□ -1.78
Rfx1P48377 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.92□□□□□ -1.78
Rfx1P48377 Gm6796-201ENSMUST00000211919 243 ntBASIC3.92□□□□□ -1.78
Rfx1P48377 Gm18188-201ENSMUST00000219386 478 ntBASIC3.92□□□□□ -1.78
Rfx1P48377 AC154328.1-201ENSMUST00000225875 307 ntBASIC3.92□□□□□ -1.78
Rfx1P48377 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Rfx1P48377 Gm25589-201ENSMUST00000082502 166 ntBASIC3.92□□□□□ -1.78
Rfx1P48377 Snord35b-201ENSMUST00000082833 87 ntBASIC3.92□□□□□ -1.78
Rfx1P48377 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Rfx1P48377 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.92□□□□□ -1.78
Rfx1P48377 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
Rfx1P48377 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 107.8 ms