Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm22537-201ENSMUST00000158172 199 ntBASIC0.94□□□□□ -2.26
Cdx2P43241 Gm25901-201ENSMUST00000158494 130 ntBASIC0.94□□□□□ -2.26
Cdx2P43241 Gm22075-201ENSMUST00000158599 192 ntBASIC0.94□□□□□ -2.26
Cdx2P43241 Ighv12-1-201ENSMUST00000195542 329 ntBASIC0.94□□□□□ -2.26
Cdx2P43241 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC0.94□□□□□ -2.26
Cdx2P43241 Gm44830-201ENSMUST00000207667 584 ntBASIC0.94□□□□□ -2.26
Cdx2P43241 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC0.94□□□□□ -2.26
Cdx2P43241 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC0.94□□□□□ -2.26
Cdx2P43241 AC154521.1-201ENSMUST00000222635 330 ntBASIC0.94□□□□□ -2.26
Cdx2P43241 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
Cdx2P43241 Gm23140-201ENSMUST00000082487 107 ntBASIC0.94□□□□□ -2.26
Cdx2P43241 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
Cdx2P43241 Mir466n-201ENSMUST00000104798 94 ntBASIC0.93□□□□□ -2.26
Cdx2P43241 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
Cdx2P43241 Gm14887-201ENSMUST00000119522 663 ntBASIC0.93□□□□□ -2.26
Cdx2P43241 Gm6829-201ENSMUST00000119858 360 ntBASIC0.93□□□□□ -2.26
Cdx2P43241 Gm11849-201ENSMUST00000121293 261 ntBASIC0.93□□□□□ -2.26
Cdx2P43241 Mir1967-201ENSMUST00000157789 82 ntBASIC0.93□□□□□ -2.26
Cdx2P43241 Gm3221-201ENSMUST00000164869 440 ntBASIC0.93□□□□□ -2.26
Cdx2P43241 Mir28b-201ENSMUST00000175399 80 ntBASIC0.93□□□□□ -2.26
Cdx2P43241 Gm21673-201ENSMUST00000186640 436 ntBASIC0.93□□□□□ -2.26
Cdx2P43241 Gm21135-201ENSMUST00000189023 436 ntBASIC0.93□□□□□ -2.26
Cdx2P43241 Gm37361-201ENSMUST00000194345 132 ntBASIC0.93□□□□□ -2.26
Cdx2P43241 Gm43199-201ENSMUST00000200019 307 ntBASIC0.93□□□□□ -2.26
Cdx2P43241 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC0.93□□□□□ -2.26
Cdx2P43241 AC160863.1-201ENSMUST00000218412 317 ntBASIC0.93□□□□□ -2.26
Cdx2P43241 AC138290.2-201ENSMUST00000218822 369 ntBASIC0.93□□□□□ -2.26
Cdx2P43241 CT025630.1-201ENSMUST00000227901 172 ntBASIC0.93□□□□□ -2.26
Cdx2P43241 Gm25079-201ENSMUST00000082529 203 ntBASIC0.93□□□□□ -2.26
Cdx2P43241 Mir465-201ENSMUST00000093563 74 ntBASIC0.93□□□□□ -2.26
Cdx2P43241 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
Cdx2P43241 AC162910.1-201ENSMUST00000221219 1723 ntBASIC0.92□□□□□ -2.26
Cdx2P43241 Mir687-201ENSMUST00000102166 89 ntBASIC0.92□□□□□ -2.26
Cdx2P43241 Gm14624-201ENSMUST00000117746 192 ntBASIC0.92□□□□□ -2.26
Cdx2P43241 Gm14551-201ENSMUST00000120802 256 ntBASIC0.92□□□□□ -2.26
Cdx2P43241 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
Cdx2P43241 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC0.92□□□□□ -2.26
Cdx2P43241 Trbv24-201ENSMUST00000194614 347 ntBASIC0.92□□□□□ -2.26
Cdx2P43241 Gm44654-201ENSMUST00000208052 329 ntBASIC0.92□□□□□ -2.26
Cdx2P43241 AC069561.2-201ENSMUST00000217596 420 ntBASIC0.92□□□□□ -2.26
Cdx2P43241 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC0.92□□□□□ -2.26
Cdx2P43241 Gm37061-201ENSMUST00000195066 3243 ntBASIC0.91□□□□□ -2.26
Cdx2P43241 Gm38388-201ENSMUST00000195569 1430 ntBASIC0.91□□□□□ -2.26
Cdx2P43241 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
Cdx2P43241 Gm14972-201ENSMUST00000121780 364 ntBASIC0.91□□□□□ -2.26
Cdx2P43241 Gm15365-201ENSMUST00000122392 300 ntBASIC0.91□□□□□ -2.26
Cdx2P43241 Gm23184-201ENSMUST00000122594 131 ntBASIC0.91□□□□□ -2.26
Cdx2P43241 Gm24229-201ENSMUST00000158830 118 ntBASIC0.91□□□□□ -2.26
Cdx2P43241 Gm25166-201ENSMUST00000158909 111 ntBASIC0.91□□□□□ -2.26
Cdx2P43241 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC0.91□□□□□ -2.26
Cdx2P43241 Mir7675-201ENSMUST00000184262 58 ntBASIC0.91□□□□□ -2.26
Cdx2P43241 Gm43004-201ENSMUST00000201872 703 ntBASIC0.91□□□□□ -2.26
Cdx2P43241 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.91□□□□□ -2.26
Cdx2P43241 Gm19032-201ENSMUST00000208584 592 ntBASIC0.91□□□□□ -2.26
Cdx2P43241 Gm45907-201ENSMUST00000213023 193 ntBASIC0.91□□□□□ -2.26
Cdx2P43241 AC129202.1-201ENSMUST00000224895 526 ntBASIC0.91□□□□□ -2.26
Cdx2P43241 Gm26203-201ENSMUST00000082911 114 ntBASIC0.91□□□□□ -2.26
Cdx2P43241 Gm23462-201ENSMUST00000083264 104 ntBASIC0.91□□□□□ -2.26
Cdx2P43241 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC0.91□□□□□ -2.26
Cdx2P43241 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
Cdx2P43241 Gm10730-201ENSMUST00000194097 2723 ntBASIC0.91□□□□□ -2.26
Cdx2P43241 Gm44240-201ENSMUST00000204015 2654 ntBASIC0.91□□□□□ -2.26
Cdx2P43241 Gm12636-201ENSMUST00000117395 624 ntBASIC0.9□□□□□ -2.27
Cdx2P43241 Gm12417-201ENSMUST00000119153 403 ntBASIC0.9□□□□□ -2.27
Cdx2P43241 Gm24892-201ENSMUST00000122747 104 ntBASIC0.9□□□□□ -2.27
Cdx2P43241 Gm23170-201ENSMUST00000157158 106 ntBASIC0.9□□□□□ -2.27
Cdx2P43241 Gm22074-201ENSMUST00000158595 113 ntBASIC0.9□□□□□ -2.27
Cdx2P43241 Gm22076-201ENSMUST00000158601 84 ntBASIC0.9□□□□□ -2.27
Cdx2P43241 Gm23008-201ENSMUST00000158946 80 ntBASIC0.9□□□□□ -2.27
Cdx2P43241 Gm17154-201ENSMUST00000165748 431 ntBASIC0.9□□□□□ -2.27
Cdx2P43241 Gm22290-201ENSMUST00000177655 107 ntBASIC0.9□□□□□ -2.27
Cdx2P43241 Gm22583-201ENSMUST00000178031 107 ntBASIC0.9□□□□□ -2.27
Cdx2P43241 Gm24168-201ENSMUST00000178825 107 ntBASIC0.9□□□□□ -2.27
Cdx2P43241 Mir6419-201ENSMUST00000184784 113 ntBASIC0.9□□□□□ -2.27
Cdx2P43241 Gm10193-201ENSMUST00000188288 231 ntBASIC0.9□□□□□ -2.27
Cdx2P43241 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC0.9□□□□□ -2.27
Cdx2P43241 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC0.9□□□□□ -2.27
Cdx2P43241 Gm42805-201ENSMUST00000196158 276 ntBASIC0.9□□□□□ -2.27
Cdx2P43241 Gm45268-201ENSMUST00000210046 370 ntBASIC0.9□□□□□ -2.27
Cdx2P43241 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC0.9□□□□□ -2.27
Cdx2P43241 AC153957.1-201ENSMUST00000215235 229 ntBASIC0.9□□□□□ -2.27
Cdx2P43241 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC0.9□□□□□ -2.27
Cdx2P43241 AC163660.3-201ENSMUST00000224253 1563 ntBASIC0.89□□□□□ -2.27
Cdx2P43241 Gm13672-201ENSMUST00000117554 459 ntBASIC0.89□□□□□ -2.27
Cdx2P43241 n-R5s80-201ENSMUST00000122596 111 ntBASIC0.89□□□□□ -2.27
Cdx2P43241 Gm24896-201ENSMUST00000122741 135 ntBASIC0.89□□□□□ -2.27
Cdx2P43241 Gm23829-201ENSMUST00000157392 270 ntBASIC0.89□□□□□ -2.27
Cdx2P43241 Gm23641-201ENSMUST00000157857 101 ntBASIC0.89□□□□□ -2.27
Cdx2P43241 Gm23090-201ENSMUST00000177331 78 ntBASIC0.89□□□□□ -2.27
Cdx2P43241 Gm22584-201ENSMUST00000177935 92 ntBASIC0.89□□□□□ -2.27
Cdx2P43241 Gm28437-201ENSMUST00000190277 783 ntBASIC0.89□□□□□ -2.27
Cdx2P43241 Gm37757-201ENSMUST00000193072 210 ntBASIC0.89□□□□□ -2.27
Cdx2P43241 Gm42533-201ENSMUST00000196247 157 ntBASIC0.89□□□□□ -2.27
Cdx2P43241 Gm43531-201ENSMUST00000200676 1114 ntBASIC0.89□□□□□ -2.27
Cdx2P43241 Gm29848-201ENSMUST00000203107 295 ntBASIC0.89□□□□□ -2.27
Cdx2P43241 Gm19441-201ENSMUST00000221545 330 ntBASIC0.89□□□□□ -2.27
Cdx2P43241 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
Cdx2P43241 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
Cdx2P43241 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC0.89□□□□□ -2.27
Cdx2P43241 Gm381-201ENSMUST00000117443 2037 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 174 ms